RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 OR14A16Q8NHC5 309 aa12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 IFI44Q8TCB0 444 aa12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 SLC39A7Q92504 469 aa12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 FCRL5Q96RD9 977 aa12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 INPP5KQ9BT40 448 aa12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 SLC17A6Q9P2U8 582 aa12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 NDRG2Q9UN36 371 aaKnown RBP12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 PKP3Q9Y446 797 aa12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 V9GYQ6 96 aa12.04□□□□□ -0.48
RTFDC1-207ENST00000477573 IGLV3-10A0A075B6K4 115 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 IFRD1O00458 451 aaPredicted RBP12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 WBP4O75554 376 aaKnown RBP12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 UBXN7O94888 489 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 KDM4BO94953 1096 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 TBX18O95935 607 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 IGLV3-27P01718 113 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 SBK2P0C263 348 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 ENGP17813 658 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 PAX6P26367 422 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 CRABP1P29762 137 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 LCN1P31025 176 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 RPS19P39019 145 aaKnown RBP12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 CSRP3P50461 194 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 RENBPP51606 427 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 GEMP55040 296 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 CRADDP78560 199 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 IRF9Q00978 393 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 EMX2Q04743 252 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 NFYCQ13952 458 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 SMN1Q16637 294 aaKnown RBP12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 RAB44Q7Z6P3 723 aaPredicted RBP12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 SLC34A3Q8N130 599 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 C1orf52Q8N6N3 182 aaKnown RBP12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 TEX19Q8NA77 164 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 ZNF511Q8NB15 262 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 OR52E4Q8NGH9 312 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 OR2T11Q8NH01 316 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 TCTEX1D2Q8WW35 142 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 RFT1Q96AA3 541 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 MTFMTQ96DP5 389 aaKnown RBP12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 OTUB1Q96FW1 271 aaPredicted RBP12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 RPL10LQ96L21 214 aaKnown RBP12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 PITX2Q99697 317 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 MRPL57Q9BQC6 102 aaKnown RBP12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 SAP130Q9H0E3 1048 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 TMPRSS5Q9H3S3 457 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 GORASP2Q9H8Y8 452 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 RNF122Q9H9V4 155 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 ZFP57Q9NU63 452 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 PPIEQ9UNP9 301 aaKnown RBP12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 NPTNQ9Y639 398 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 CHD5Q8TDI0 1954 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 CCDC163A0A0D9SF12 145 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 ZNF879B4DU55 563 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 DLX3O60479 287 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 FHP07954 510 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 MAN2A2P49641 1150 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 TNFRSF17Q02223 184 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 CRYZQ08257 329 aaKnown RBP12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 MAP4K2Q12851 820 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 GRM3Q14832 879 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 RABL3Q5HYI8 236 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 GLCCI1Q86VQ1 547 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 ATCAYQ86WG3 371 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 ZNF227Q86WZ6 799 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 KLHDC8BQ8IXV7 354 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 HS3ST5Q8IZT8 346 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 ARRDC1Q8N5I2 433 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 CLDN22Q8N7P3 220 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 POMGNT2Q8NAT1 580 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 OR1S1Q8NH92 325 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 KAT2AQ92830 837 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 CERS2Q96G23 380 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 MS4A3Q96HJ5 214 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 CCDC115Q96NT0 180 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 DUSP15Q9H1R2 295 aaPredicted RBP12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 DLL4Q9NR61 685 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 RBM22Q9NW64 420 aaKnown RBP eCLIP12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 RUVBL1Q9Y265 456 aaKnown RBP12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 CA5BQ9Y2D0 317 aa12.03□□□□□ -0.48
RTFDC1-207ENST00000477573 WASH3PC4AMC7 463 aa12.02□□□□□ -0.48
RTFDC1-207ENST00000477573 SLC34A2O95436 690 aa12.02□□□□□ -0.48
RTFDC1-207ENST00000477573 LY86O95711 162 aa12.02□□□□□ -0.48
RTFDC1-207ENST00000477573 RAB3DO95716 219 aa12.02□□□□□ -0.48
RTFDC1-207ENST00000477573 GUCA1CO95843 209 aa12.02□□□□□ -0.48
RTFDC1-207ENST00000477573 HMBSP08397 361 aa12.02□□□□□ -0.48
RTFDC1-207ENST00000477573 G6PDP11413 515 aa12.02□□□□□ -0.48
RTFDC1-207ENST00000477573 LAG3P18627 525 aa12.02□□□□□ -0.48
RTFDC1-207ENST00000477573 CCR7P32248 378 aa12.02□□□□□ -0.48
RTFDC1-207ENST00000477573 MMP12P39900 470 aa12.02□□□□□ -0.48
RTFDC1-207ENST00000477573 MAT1AQ00266 395 aaKnown RBP12.02□□□□□ -0.48
RTFDC1-207ENST00000477573 ILF3Q12906 894 aaKnown RBP eCLIP12.02□□□□□ -0.48
RTFDC1-207ENST00000477573 DOC2AQ14183 400 aa12.02□□□□□ -0.48
RTFDC1-207ENST00000477573 ZNF683Q8IZ20 524 aa12.02□□□□□ -0.48
RTFDC1-207ENST00000477573 Q8N402 240 aa12.02□□□□□ -0.48
RTFDC1-207ENST00000477573 FTMTQ8N4E7 242 aa12.02□□□□□ -0.48
RTFDC1-207ENST00000477573 MOCOSQ96EN8 888 aa12.02□□□□□ -0.48
RTFDC1-207ENST00000477573 TMEM43Q9BTV4 400 aa12.02□□□□□ -0.48
RTFDC1-207ENST00000477573 SARGQ9BW04 601 aa12.02□□□□□ -0.48
RTFDC1-207ENST00000477573 MRPL37Q9BZE1 423 aaKnown RBP12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms