RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 ANP32DO95626 131 aa15.09■□□□□ 0.01
VHL-203ENST00000477538 DDAH2O95865 285 aa15.09■□□□□ 0.01
VHL-203ENST00000477538 GSNP06396 782 aa15.09■□□□□ 0.01
VHL-203ENST00000477538 IFI6P09912 130 aa15.09■□□□□ 0.01
VHL-203ENST00000477538 SOX18P35713 384 aa15.09■□□□□ 0.01
VHL-203ENST00000477538 EIF2S3P41091 472 aaKnown RBP15.09■□□□□ 0.01
VHL-203ENST00000477538 EXOSC7Q15024 291 aaKnown RBP15.09■□□□□ 0.01
VHL-203ENST00000477538 TRMT12Q53H54 448 aaKnown RBP15.09■□□□□ 0.01
VHL-203ENST00000477538 NDUFAF7Q7L592 441 aa15.09■□□□□ 0.01
VHL-203ENST00000477538 DHDDSQ86SQ9 333 aa15.09■□□□□ 0.01
VHL-203ENST00000477538 DPP10Q8N608 796 aa15.09■□□□□ 0.01
VHL-203ENST00000477538 TRIML2Q8N7C3 387 aa15.09■□□□□ 0.01
VHL-203ENST00000477538 PCYOX1LQ8NBM8 494 aa15.09■□□□□ 0.01
VHL-203ENST00000477538 MORN4Q8NDC4 146 aa15.09■□□□□ 0.01
VHL-203ENST00000477538 SLC2A12Q8TD20 617 aa15.09■□□□□ 0.01
VHL-203ENST00000477538 FBXL20Q96IG2 436 aa15.09■□□□□ 0.01
VHL-203ENST00000477538 MAGED4Q96JG8 741 aa15.09■□□□□ 0.01
VHL-203ENST00000477538 DCBLD2Q96PD2 775 aa15.09■□□□□ 0.01
VHL-203ENST00000477538 TUBB6Q9BUF5 446 aa15.09■□□□□ 0.01
VHL-203ENST00000477538 TRIM4Q9C037 500 aa15.09■□□□□ 0.01
VHL-203ENST00000477538 OR8D2Q9GZM6 311 aa15.09■□□□□ 0.01
VHL-203ENST00000477538 PAIP1Q9H074 479 aaKnown RBP15.09■□□□□ 0.01
VHL-203ENST00000477538 C3orf14Q9HBI5 128 aa15.09■□□□□ 0.01
VHL-203ENST00000477538 DDX18Q9NVP1 670 aaKnown RBP15.09■□□□□ 0.01
VHL-203ENST00000477538 P4HTMQ9NXG6 502 aa15.09■□□□□ 0.01
VHL-203ENST00000477538 PTGFRNQ9P2B2 879 aa15.09■□□□□ 0.01
VHL-203ENST00000477538 ZNF639Q9UID6 485 aa15.09■□□□□ 0.01
VHL-203ENST00000477538 FBXL4Q9UKA2 621 aa15.09■□□□□ 0.01
VHL-203ENST00000477538 A0A087WV62 115 aa15.08■□□□□ 0
VHL-203ENST00000477538 HRKO00198 91 aa15.08■□□□□ 0
VHL-203ENST00000477538 RRP8O43159 456 aaKnown RBP15.08■□□□□ 0
VHL-203ENST00000477538 ERN1O75460 977 aaKnown RBP15.08■□□□□ 0
VHL-203ENST00000477538 UBOX5O94941 541 aa15.08■□□□□ 0
VHL-203ENST00000477538 HPP00738 406 aa15.08■□□□□ 0
VHL-203ENST00000477538 ESRRAP11474 423 aaPredicted RBP15.08■□□□□ 0
VHL-203ENST00000477538 S1PR1P21453 382 aa15.08■□□□□ 0
VHL-203ENST00000477538 UQCRC2P22695 453 aa15.08■□□□□ 0
VHL-203ENST00000477538 SSTR4P31391 388 aa15.08■□□□□ 0
VHL-203ENST00000477538 CPA2P48052 419 aa15.08■□□□□ 0
VHL-203ENST00000477538 CCT3P49368 545 aaKnown RBP15.08■□□□□ 0
VHL-203ENST00000477538 SLC26A5P58743 744 aa15.08■□□□□ 0
VHL-203ENST00000477538 FUT7Q11130 342 aa15.08■□□□□ 0
VHL-203ENST00000477538 GAB1Q13480 694 aa15.08■□□□□ 0
VHL-203ENST00000477538 ATP1A4Q13733 1029 aa15.08■□□□□ 0
VHL-203ENST00000477538 NFYCQ13952 458 aa15.08■□□□□ 0
VHL-203ENST00000477538 TRMT5Q32P41 509 aaKnown RBP15.08■□□□□ 0
VHL-203ENST00000477538 SPDYE7PQ495Y7 208 aa15.08■□□□□ 0
VHL-203ENST00000477538 LRIF1Q5T3J3 769 aa15.08■□□□□ 0
VHL-203ENST00000477538 ATP1A1-AS1Q5TC04 95 aa15.08■□□□□ 0
VHL-203ENST00000477538 FHL5Q5TD97 284 aa15.08■□□□□ 0
VHL-203ENST00000477538 C6orf89Q6UWU4 347 aa15.08■□□□□ 0
VHL-203ENST00000477538 TMEM64Q6YI46 380 aa15.08■□□□□ 0
VHL-203ENST00000477538 ZNF621Q6ZSS3 439 aa15.08■□□□□ 0
VHL-203ENST00000477538 SZRD1Q7Z422 152 aa15.08■□□□□ 0
VHL-203ENST00000477538 SPACA3Q8IXA5 215 aa15.08■□□□□ 0
VHL-203ENST00000477538 OR2L13Q8N349 312 aa15.08■□□□□ 0
VHL-203ENST00000477538 NFAM1Q8NET5 270 aaPredicted RBP15.08■□□□□ 0
VHL-203ENST00000477538 B3GNT7Q8NFL0 401 aa15.08■□□□□ 0
VHL-203ENST00000477538 OR5AK3PQ8NH89 298 aa15.08■□□□□ 0
VHL-203ENST00000477538 DNAJB8Q8NHS0 232 aa15.08■□□□□ 0
VHL-203ENST00000477538 SFXN5Q8TD22 340 aa15.08■□□□□ 0
VHL-203ENST00000477538 ZNF721Q8TF20 911 aa15.08■□□□□ 0
VHL-203ENST00000477538 NCLNQ969V3 563 aa15.08■□□□□ 0
VHL-203ENST00000477538 FAM120BQ96EK7 910 aaKnown RBP15.08■□□□□ 0
VHL-203ENST00000477538 SENP5Q96HI0 755 aaPredicted RBP15.08■□□□□ 0
VHL-203ENST00000477538 NSL1Q96IY1 281 aa15.08■□□□□ 0
VHL-203ENST00000477538 ANKRA2Q9H9E1 313 aa15.08■□□□□ 0
VHL-203ENST00000477538 IL1RL2Q9HB29 575 aa15.08■□□□□ 0
VHL-203ENST00000477538 SLC6A13Q9NSD5 602 aa15.08■□□□□ 0
VHL-203ENST00000477538 ZCCHC3Q9NUD5 404 aaKnown RBP15.08■□□□□ 0
VHL-203ENST00000477538 MAP10Q9P2G4 905 aa15.08■□□□□ 0
VHL-203ENST00000477538 COPS7AQ9UBW8 275 aa15.08■□□□□ 0
VHL-203ENST00000477538 BCAP29Q9UHQ4 241 aa15.08■□□□□ 0
VHL-203ENST00000477538 EML6Q6ZMW3 1958 aa15.07■□□□□ 0
VHL-203ENST00000477538 RNF103-CHMP3A0A140T963 221 aa15.07■□□□□ 0
VHL-203ENST00000477538 UPK1AO00322 258 aa15.07■□□□□ 0
VHL-203ENST00000477538 AIM2O14862 343 aa15.07■□□□□ 0
VHL-203ENST00000477538 NKX2-8O15522 239 aa15.07■□□□□ 0
VHL-203ENST00000477538 EMC8O43402 210 aa15.07■□□□□ 0
VHL-203ENST00000477538 CBX7O95931 251 aa15.07■□□□□ 0
VHL-203ENST00000477538 ZCCHC18P0CG32 403 aa15.07■□□□□ 0
VHL-203ENST00000477538 PRKAR1AP10644 381 aa15.07■□□□□ 0
VHL-203ENST00000477538 HOXB9P17482 250 aaPredicted RBP15.07■□□□□ 0
VHL-203ENST00000477538 PTPN6P29350 595 aa15.07■□□□□ 0
VHL-203ENST00000477538 NUDT2P50583 147 aa15.07■□□□□ 0
VHL-203ENST00000477538 PRR5P85299 388 aa15.07■□□□□ 0
VHL-203ENST00000477538 CDC20Q12834 499 aa15.07■□□□□ 0
VHL-203ENST00000477538 EXT1Q16394 746 aa15.07■□□□□ 0
VHL-203ENST00000477538 BTBD16Q32M84 506 aa15.07■□□□□ 0
VHL-203ENST00000477538 GTDC1Q4AE62 458 aa15.07■□□□□ 0
VHL-203ENST00000477538 CRTC2Q53ET0 693 aaPredicted RBP15.07■□□□□ 0
VHL-203ENST00000477538 DLEU7Q6UYE1 221 aa15.07■□□□□ 0
VHL-203ENST00000477538 RNF111Q6ZNA4 994 aa15.07■□□□□ 0
VHL-203ENST00000477538 CLEC4FQ8N1N0 589 aa15.07■□□□□ 0
VHL-203ENST00000477538 ZNF321PQ8N8H1 164 aa15.07■□□□□ 0
VHL-203ENST00000477538 ZSCAN1Q8NBB4 408 aa15.07■□□□□ 0
VHL-203ENST00000477538 SIMC1Q8NDZ2 872 aa15.07■□□□□ 0
VHL-203ENST00000477538 NUP43Q8NFH3 380 aa15.07■□□□□ 0
VHL-203ENST00000477538 OR7G1Q8NGA0 311 aa15.07■□□□□ 0
VHL-203ENST00000477538 OR1N1Q8NGS0 311 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms