RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 PDCD4Q53EL6 469 aaKnown RBP14.75□□□□□ -0.05
COPS3-207ENST00000477299 FHL5Q5TD97 284 aa14.75□□□□□ -0.05
COPS3-207ENST00000477299 H3F3CQ6NXT2 135 aa14.75□□□□□ -0.05
COPS3-207ENST00000477299 TMEM107Q6UX40 140 aa14.75□□□□□ -0.05
COPS3-207ENST00000477299 R3HCC1LQ7Z5L2 792 aaKnown RBP14.75□□□□□ -0.05
COPS3-207ENST00000477299 CLEC4FQ8N1N0 589 aa14.75□□□□□ -0.05
COPS3-207ENST00000477299 ZNF615Q8N8J6 731 aa14.75□□□□□ -0.05
COPS3-207ENST00000477299 VMP1Q96GC9 406 aa14.75□□□□□ -0.05
COPS3-207ENST00000477299 ZNF764Q96H86 408 aaPredicted RBP14.75□□□□□ -0.05
COPS3-207ENST00000477299 SLC25A23Q9BV35 468 aa14.75□□□□□ -0.05
COPS3-207ENST00000477299 TRIM4Q9C037 500 aa14.75□□□□□ -0.05
COPS3-207ENST00000477299 ZNF385DQ9H6B1 395 aa14.75□□□□□ -0.05
COPS3-207ENST00000477299 ZNF71Q9NQZ8 489 aaPredicted RBP14.75□□□□□ -0.05
COPS3-207ENST00000477299 SDR39U1Q9NRG7 319 aaPredicted RBP14.75□□□□□ -0.05
COPS3-207ENST00000477299 GIMAP4Q9NUV9 329 aa14.75□□□□□ -0.05
COPS3-207ENST00000477299 PLA2G3Q9NZ20 509 aa14.75□□□□□ -0.05
COPS3-207ENST00000477299 ATRXP46100 2492 aa14.75□□□□□ -0.05
COPS3-207ENST00000477299 SLC22A3O75751 556 aa14.74□□□□□ -0.05
COPS3-207ENST00000477299 C6orf47O95873 294 aa14.74□□□□□ -0.05
COPS3-207ENST00000477299 TROVE2P10155 538 aaKnown RBP eCLIP14.74□□□□□ -0.05
COPS3-207ENST00000477299 ICAM2P13598 275 aa14.74□□□□□ -0.05
COPS3-207ENST00000477299 IDO1P14902 403 aa14.74□□□□□ -0.05
COPS3-207ENST00000477299 MPIP34949 423 aa14.74□□□□□ -0.05
COPS3-207ENST00000477299 SOX11P35716 441 aa14.74□□□□□ -0.05
COPS3-207ENST00000477299 CD97P48960 835 aa14.74□□□□□ -0.05
COPS3-207ENST00000477299 MANFP55145 182 aaKnown RBP14.74□□□□□ -0.05
COPS3-207ENST00000477299 RNF4P78317 190 aa14.74□□□□□ -0.05
COPS3-207ENST00000477299 RHDQ02161 417 aa14.74□□□□□ -0.05
COPS3-207ENST00000477299 GSTA3Q16772 222 aa14.74□□□□□ -0.05
COPS3-207ENST00000477299 ZNF468Q5VIY5 522 aaPredicted RBP14.74□□□□□ -0.05
COPS3-207ENST00000477299 TCTN3Q6NUS6 607 aa14.74□□□□□ -0.05
COPS3-207ENST00000477299 WDR53Q7Z5U6 358 aaPredicted RBP14.74□□□□□ -0.05
COPS3-207ENST00000477299 FAM9CQ8IZT9 166 aa14.74□□□□□ -0.05
COPS3-207ENST00000477299 VWA5B2Q8N398 1253 aa14.74□□□□□ -0.05
COPS3-207ENST00000477299 BBC3Q96PG8 261 aaPredicted RBP14.74□□□□□ -0.05
COPS3-207ENST00000477299 ARHGAP9Q9BRR9 750 aa14.74□□□□□ -0.05
COPS3-207ENST00000477299 PELOQ9BRX2 385 aaKnown RBP14.74□□□□□ -0.05
COPS3-207ENST00000477299 DEFB126Q9BYW3 111 aa14.74□□□□□ -0.05
COPS3-207ENST00000477299 OR10A5Q9H207 317 aa14.74□□□□□ -0.05
COPS3-207ENST00000477299 SIRT3Q9NTG7 399 aaPredicted RBP14.74□□□□□ -0.05
COPS3-207ENST00000477299 KLHL14Q9P2G3 628 aa14.74□□□□□ -0.05
COPS3-207ENST00000477299 BCAP29Q9UHQ4 241 aa14.74□□□□□ -0.05
COPS3-207ENST00000477299 TP53TG5Q9Y2B4 290 aa14.74□□□□□ -0.05
COPS3-207ENST00000477299 CSAG2Q9Y5P2 127 aa14.74□□□□□ -0.05
COPS3-207ENST00000477299 A0A1W2PRB8 838 aa14.73□□□□□ -0.05
COPS3-207ENST00000477299 WWP2O00308 870 aa14.73□□□□□ -0.05
COPS3-207ENST00000477299 NTSP30990 170 aa14.73□□□□□ -0.05
COPS3-207ENST00000477299 EMDP50402 254 aa14.73□□□□□ -0.05
COPS3-207ENST00000477299 KCNAB2Q13303 367 aa14.73□□□□□ -0.05
COPS3-207ENST00000477299 TMEM64Q6YI46 380 aa14.73□□□□□ -0.05
COPS3-207ENST00000477299 RNF111Q6ZNA4 994 aa14.73□□□□□ -0.05
COPS3-207ENST00000477299 CAMKMTQ7Z624 323 aa14.73□□□□□ -0.05
COPS3-207ENST00000477299 RPS19BP1Q86WX3 136 aaKnown RBP14.73□□□□□ -0.05
COPS3-207ENST00000477299 MIER2Q8N344 545 aa14.73□□□□□ -0.05
COPS3-207ENST00000477299 OR52R1Q8NGF1 315 aa14.73□□□□□ -0.05
COPS3-207ENST00000477299 C16orf52Q8NHV5 167 aa14.73□□□□□ -0.05
COPS3-207ENST00000477299 ZNF675Q8TD23 568 aa14.73□□□□□ -0.05
COPS3-207ENST00000477299 VPS33AQ96AX1 596 aa14.73□□□□□ -0.05
COPS3-207ENST00000477299 TESCQ96BS2 214 aa14.73□□□□□ -0.05
COPS3-207ENST00000477299 ELP4Q96EB1 424 aa14.73□□□□□ -0.05
COPS3-207ENST00000477299 INPP5KQ9BT40 448 aa14.73□□□□□ -0.05
COPS3-207ENST00000477299 BHLHE41Q9C0J9 482 aaPredicted RBP14.73□□□□□ -0.05
COPS3-207ENST00000477299 CXorf36Q9H7Y0 433 aa14.73□□□□□ -0.05
COPS3-207ENST00000477299 ZIM2Q9NZV7 527 aa14.73□□□□□ -0.05
COPS3-207ENST00000477299 ADAM21Q9UKJ8 722 aa14.73□□□□□ -0.05
COPS3-207ENST00000477299 NINQ8N4C6 2090 aa14.72□□□□□ -0.05
COPS3-207ENST00000477299 UPK1AO00322 258 aa14.72□□□□□ -0.05
COPS3-207ENST00000477299 CPSF4O95639 269 aaKnown RBP14.72□□□□□ -0.05
COPS3-207ENST00000477299 ABCB1P08183 1280 aaPredicted RBP14.72□□□□□ -0.05
COPS3-207ENST00000477299 S100A3P33764 101 aa14.72□□□□□ -0.05
COPS3-207ENST00000477299 KIR3DL1P43629 444 aa14.72□□□□□ -0.05
COPS3-207ENST00000477299 MLF1P58340 268 aa14.72□□□□□ -0.05
COPS3-207ENST00000477299 HBA1P69905 142 aa14.72□□□□□ -0.05
COPS3-207ENST00000477299 UBAP2LQ14157 1087 aaKnown RBP14.72□□□□□ -0.05
COPS3-207ENST00000477299 ACER2Q5QJU3 275 aa14.72□□□□□ -0.05
COPS3-207ENST00000477299 HSDL2Q6YN16 418 aa14.72□□□□□ -0.05
COPS3-207ENST00000477299 BEST3Q8N1M1 668 aa14.72□□□□□ -0.05
COPS3-207ENST00000477299 CATSPER1Q8NEC5 780 aa14.72□□□□□ -0.05
COPS3-207ENST00000477299 OR8J2Q8NGG1 315 aa14.72□□□□□ -0.05
COPS3-207ENST00000477299 STON2Q8WXE9 905 aa14.72□□□□□ -0.05
COPS3-207ENST00000477299 SMAD5Q99717 465 aaKnown RBP14.72□□□□□ -0.05
COPS3-207ENST00000477299 SIKE1Q9BRV8 207 aa14.72□□□□□ -0.05
COPS3-207ENST00000477299 SLC52A3Q9NQ40 469 aa14.72□□□□□ -0.05
COPS3-207ENST00000477299 ACSS1Q9NUB1 689 aaPredicted RBP14.72□□□□□ -0.05
COPS3-207ENST00000477299 ANKRD10Q9NXR5 420 aa14.72□□□□□ -0.05
COPS3-207ENST00000477299 STMN3Q9NZ72 180 aa14.72□□□□□ -0.05
COPS3-207ENST00000477299 BSNQ9UPA5 3926 aa14.72□□□□□ -0.05
COPS3-207ENST00000477299 ASPDHA6ND91 283 aa14.71□□□□□ -0.05
COPS3-207ENST00000477299 MKRN2OSH3BPM6 223 aa14.71□□□□□ -0.05
COPS3-207ENST00000477299 PLOD3O60568 738 aa14.71□□□□□ -0.05
COPS3-207ENST00000477299 ZFAND5O76080 213 aa14.71□□□□□ -0.05
COPS3-207ENST00000477299 WDPCPO95876 746 aa14.71□□□□□ -0.05
COPS3-207ENST00000477299 GPC1P35052 558 aa14.71□□□□□ -0.05
COPS3-207ENST00000477299 RPL3P39023 403 aaKnown RBP14.71□□□□□ -0.05
COPS3-207ENST00000477299 CDKN2CP42773 168 aa14.71□□□□□ -0.05
COPS3-207ENST00000477299 POLR2JP52435 117 aaKnown RBP14.71□□□□□ -0.05
COPS3-207ENST00000477299 CLNS1AP54105 237 aaKnown RBP14.71□□□□□ -0.05
COPS3-207ENST00000477299 SRSF11Q05519 484 aaKnown RBP14.71□□□□□ -0.05
COPS3-207ENST00000477299 EBPQ15125 230 aaKnown RBP14.71□□□□□ -0.05
COPS3-207ENST00000477299 NNATQ16517 81 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms