RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 HLA-DQA1Q5Y7H0 255 aa12.42□□□□□ -0.42
ACTN4-205ENST00000477174 FAM71E1Q6IPT2 247 aa12.42□□□□□ -0.42
ACTN4-205ENST00000477174 DDIASQ8IXT1 998 aa12.42□□□□□ -0.42
ACTN4-205ENST00000477174 CCDC116Q8IYX3 515 aa12.42□□□□□ -0.42
ACTN4-205ENST00000477174 TAGAPQ8N103 731 aa12.42□□□□□ -0.42
ACTN4-205ENST00000477174 ZNF441Q8N8Z8 693 aa12.42□□□□□ -0.42
ACTN4-205ENST00000477174 PSD4Q8NDX1 1056 aa12.42□□□□□ -0.42
ACTN4-205ENST00000477174 TWIST2Q8WVJ9 160 aa12.42□□□□□ -0.42
ACTN4-205ENST00000477174 FRMD6Q96NE9 622 aa12.42□□□□□ -0.42
ACTN4-205ENST00000477174 MAT2BQ9NZL9 334 aa12.42□□□□□ -0.42
ACTN4-205ENST00000477174 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.42□□□□□ -0.42
ACTN4-205ENST00000477174 FIS1Q9Y3D6 152 aa12.42□□□□□ -0.42
ACTN4-205ENST00000477174 POLR3HQ9Y535 204 aaPredicted RBP12.42□□□□□ -0.42
ACTN4-205ENST00000477174 PTGDR2Q9Y5Y4 395 aa12.42□□□□□ -0.42
ACTN4-205ENST00000477174 SVILO95425 2214 aa12.42□□□□□ -0.42
ACTN4-205ENST00000477174 USP9XQ93008 2570 aaPredicted RBP12.41□□□□□ -0.42
ACTN4-205ENST00000477174 WDR91A4D1P6 747 aa12.41□□□□□ -0.42
ACTN4-205ENST00000477174 TMEM114B3SHH9 223 aa12.41□□□□□ -0.42
ACTN4-205ENST00000477174 TMEM233B4DJY2 109 aa12.41□□□□□ -0.42
ACTN4-205ENST00000477174 LSM1O15116 133 aaKnown RBP12.41□□□□□ -0.42
ACTN4-205ENST00000477174 NADKO95544 446 aaPredicted RBP12.41□□□□□ -0.42
ACTN4-205ENST00000477174 FBXO45P0C2W1 286 aa12.41□□□□□ -0.42
ACTN4-205ENST00000477174 CNR1P21554 472 aa12.41□□□□□ -0.42
ACTN4-205ENST00000477174 ARRB2P32121 409 aa12.41□□□□□ -0.42
ACTN4-205ENST00000477174 SLC18A1P54219 525 aa12.41□□□□□ -0.42
ACTN4-205ENST00000477174 CHI3L2Q15782 390 aa12.41□□□□□ -0.42
ACTN4-205ENST00000477174 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.41□□□□□ -0.42
ACTN4-205ENST00000477174 RFTN2Q52LD8 501 aaPredicted RBP12.41□□□□□ -0.42
ACTN4-205ENST00000477174 SLC22A10Q63ZE4 541 aa12.41□□□□□ -0.42
ACTN4-205ENST00000477174 FAM180BQ6P0A1 224 aa12.41□□□□□ -0.42
ACTN4-205ENST00000477174 FAM111BQ6SJ93 734 aa12.41□□□□□ -0.42
ACTN4-205ENST00000477174 KIRREL3Q8IZU9 778 aa12.41□□□□□ -0.42
ACTN4-205ENST00000477174 ZFP62Q8NB50 900 aaPredicted RBP12.41□□□□□ -0.42
ACTN4-205ENST00000477174 OR2T11Q8NH01 316 aa12.41□□□□□ -0.42
ACTN4-205ENST00000477174 C16orf52Q8NHV5 167 aa12.41□□□□□ -0.42
ACTN4-205ENST00000477174 ZNF675Q8TD23 568 aa12.41□□□□□ -0.42
ACTN4-205ENST00000477174 ADIPOR1Q96A54 375 aa12.41□□□□□ -0.42
ACTN4-205ENST00000477174 EXOSC8Q96B26 276 aaKnown RBP12.41□□□□□ -0.42
ACTN4-205ENST00000477174 FCRL1Q96LA6 429 aa12.41□□□□□ -0.42
ACTN4-205ENST00000477174 PPP3R2Q96LZ3 170 aa12.41□□□□□ -0.42
ACTN4-205ENST00000477174 GAL3ST4Q96RP7 486 aa12.41□□□□□ -0.42
ACTN4-205ENST00000477174 BRINP2Q9C0B6 783 aa12.41□□□□□ -0.42
ACTN4-205ENST00000477174 MIEF1Q9NQG6 463 aa12.41□□□□□ -0.42
ACTN4-205ENST00000477174 SEC14L3Q9UDX4 400 aa12.41□□□□□ -0.42
ACTN4-205ENST00000477174 ZDHHC2Q9UIJ5 367 aa12.41□□□□□ -0.42
ACTN4-205ENST00000477174 ENTPD4Q9Y227 616 aa12.41□□□□□ -0.42
ACTN4-205ENST00000477174 CAPN14A8MX76 684 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 MYO1GB0I1T2 1018 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 PIP5K1BO14986 540 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 PLOD3O60568 738 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 AGFG2O95081 481 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 UNC5CO95185 931 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 ZIC2O95409 532 aaPredicted RBP12.4□□□□□ -0.42
ACTN4-205ENST00000477174 ZNF24P17028 368 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 SOX18P35713 384 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 MEOX1P50221 254 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 NR0B1P51843 470 aaKnown RBP12.4□□□□□ -0.42
ACTN4-205ENST00000477174 NRG3P56975 720 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 ABCE1P61221 599 aaKnown RBP12.4□□□□□ -0.42
ACTN4-205ENST00000477174 DCAF7P61962 342 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 DUSP2Q05923 314 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 RBPJQ06330 500 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 CASP8Q14790 479 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 TRMT12Q53H54 448 aaKnown RBP12.4□□□□□ -0.42
ACTN4-205ENST00000477174 ZNF628Q5EBL2 1059 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 LYPD8Q6UX82 237 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 GFRALQ6UXV0 394 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 BNC2Q6ZN30 1099 aaPredicted RBP12.4□□□□□ -0.42
ACTN4-205ENST00000477174 TICAM1Q8IUC6 712 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 SIAH3Q8IW03 269 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 CPSF7Q8N684 471 aaKnown RBP12.4□□□□□ -0.42
ACTN4-205ENST00000477174 ADCY4Q8NFM4 1077 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 ZBTB9Q96C00 473 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 SPACA9Q96E40 222 aaPredicted RBP12.4□□□□□ -0.42
ACTN4-205ENST00000477174 ZNF764Q96H86 408 aaPredicted RBP12.4□□□□□ -0.42
ACTN4-205ENST00000477174 PKNOX2Q96KN3 472 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 EGLN2Q96KS0 407 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 GPR137Q96N19 417 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 BBS4Q96RK4 519 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 FAM173AQ9BQD7 235 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 TMBIM4Q9HC24 238 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 SH2D2AQ9NP31 389 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 SACM1LQ9NTJ5 587 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 CNIH4Q9P003 139 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 PRODH2Q9UF12 536 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 BCAP29Q9UHQ4 241 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 EXO1Q9UQ84 846 aaKnown RBP12.4□□□□□ -0.42
ACTN4-205ENST00000477174 OSGIN2Q9Y236 505 aa12.4□□□□□ -0.42
ACTN4-205ENST00000477174 ASH1LQ9NR48 2969 aaKnown RBP12.4□□□□□ -0.42
ACTN4-205ENST00000477174 NPIPA5E9PKD4 350 aa12.39□□□□□ -0.43
ACTN4-205ENST00000477174 ASNA1O43681 348 aa12.39□□□□□ -0.43
ACTN4-205ENST00000477174 TBX19O60806 448 aa12.39□□□□□ -0.43
ACTN4-205ENST00000477174 SEMA7AO75326 666 aa12.39□□□□□ -0.43
ACTN4-205ENST00000477174 SLITRK5O94991 958 aa12.39□□□□□ -0.43
ACTN4-205ENST00000477174 HSPA4LO95757 839 aa12.39□□□□□ -0.43
ACTN4-205ENST00000477174 CBX7O95931 251 aa12.39□□□□□ -0.43
ACTN4-205ENST00000477174 P04436 131 aa12.39□□□□□ -0.43
ACTN4-205ENST00000477174 STSP08842 583 aa12.39□□□□□ -0.43
ACTN4-205ENST00000477174 PCSK2P16519 638 aa12.39□□□□□ -0.43
ACTN4-205ENST00000477174 NAGAP17050 411 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms