RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 MAMDC2Q7Z304 686 aaPredicted RBP19.52■□□□□ 0.72
LIME1-204ENST00000476183 TRIM46Q7Z4K8 759 aa19.52■□□□□ 0.72
LIME1-204ENST00000476183 SIMC1Q8NDZ2 872 aa19.52■□□□□ 0.72
LIME1-204ENST00000476183 ADCY4Q8NFM4 1077 aa19.52■□□□□ 0.72
LIME1-204ENST00000476183 ADIPOR1Q96A54 375 aa19.52■□□□□ 0.72
LIME1-204ENST00000476183 MECRQ9BV79 373 aa19.52■□□□□ 0.72
LIME1-204ENST00000476183 TMEM109Q9BVC6 243 aa19.52■□□□□ 0.72
LIME1-204ENST00000476183 IQCGQ9H095 443 aaKnown RBP19.52■□□□□ 0.72
LIME1-204ENST00000476183 SACM1LQ9NTJ5 587 aa19.52■□□□□ 0.72
LIME1-204ENST00000476183 UTS2RQ9UKP6 389 aa19.52■□□□□ 0.72
LIME1-204ENST00000476183 PSME2Q9UL46 239 aa19.52■□□□□ 0.72
LIME1-204ENST00000476183 DTX4Q9Y2E6 619 aa19.52■□□□□ 0.72
LIME1-204ENST00000476183 FAM166BA8MTA8 275 aa19.51■□□□□ 0.71
LIME1-204ENST00000476183 CCL21O00585 134 aa19.51■□□□□ 0.71
LIME1-204ENST00000476183 CRCPO75575 148 aa19.51■□□□□ 0.71
LIME1-204ENST00000476183 GLSO94925 669 aaPredicted RBP19.51■□□□□ 0.71
LIME1-204ENST00000476183 UROSP10746 265 aa19.51■□□□□ 0.71
LIME1-204ENST00000476183 COL8A1P27658 744 aa19.51■□□□□ 0.71
LIME1-204ENST00000476183 ALDH3A1P30838 453 aa19.51■□□□□ 0.71
LIME1-204ENST00000476183 DNASE1L1P49184 302 aa19.51■□□□□ 0.71
LIME1-204ENST00000476183 FOXO1Q12778 655 aa19.51■□□□□ 0.71
LIME1-204ENST00000476183 MAP4K2Q12851 820 aa19.51■□□□□ 0.71
LIME1-204ENST00000476183 LTB4RQ15722 352 aa19.51■□□□□ 0.71
LIME1-204ENST00000476183 SPDYAQ5MJ70 313 aa19.51■□□□□ 0.71
LIME1-204ENST00000476183 TMEM64Q6YI46 380 aa19.51■□□□□ 0.71
LIME1-204ENST00000476183 VWA5B2Q8N398 1253 aa19.51■□□□□ 0.71
LIME1-204ENST00000476183 OR7G1Q8NGA0 311 aa19.51■□□□□ 0.71
LIME1-204ENST00000476183 TCP10LQ8TDR4 215 aa19.51■□□□□ 0.71
LIME1-204ENST00000476183 CCDC120Q96HB5 630 aa19.51■□□□□ 0.71
LIME1-204ENST00000476183 FAM173AQ9BQD7 235 aa19.51■□□□□ 0.71
LIME1-204ENST00000476183 TTTY12Q9BZ98 90 aa19.51■□□□□ 0.71
LIME1-204ENST00000476183 BRINP2Q9C0B6 783 aa19.51■□□□□ 0.71
LIME1-204ENST00000476183 ZNF639Q9UID6 485 aa19.51■□□□□ 0.71
LIME1-204ENST00000476183 RAB21Q9UL25 225 aa19.51■□□□□ 0.71
LIME1-204ENST00000476183 CCL27Q9Y4X3 112 aa19.51■□□□□ 0.71
LIME1-204ENST00000476183 PTGDR2Q9Y5Y4 395 aa19.51■□□□□ 0.71
LIME1-204ENST00000476183 NINQ8N4C6 2090 aa19.5■□□□□ 0.71
LIME1-204ENST00000476183 P04436 131 aa19.5■□□□□ 0.71
LIME1-204ENST00000476183 ANXA4P09525 319 aaPredicted RBP19.5■□□□□ 0.71
LIME1-204ENST00000476183 DRD2P14416 443 aa19.5■□□□□ 0.71
LIME1-204ENST00000476183 PIGAP37287 484 aa19.5■□□□□ 0.71
LIME1-204ENST00000476183 PPIAP62937 165 aaKnown RBP19.5■□□□□ 0.71
LIME1-204ENST00000476183 EXOSC7Q15024 291 aaKnown RBP19.5■□□□□ 0.71
LIME1-204ENST00000476183 C6orf163Q5TEZ5 329 aa19.5■□□□□ 0.71
LIME1-204ENST00000476183 BNC2Q6ZN30 1099 aaPredicted RBP19.5■□□□□ 0.71
LIME1-204ENST00000476183 FAM47EQ6ZV65 393 aa19.5■□□□□ 0.71
LIME1-204ENST00000476183 LRRC25Q8N386 305 aaPredicted RBP19.5■□□□□ 0.71
LIME1-204ENST00000476183 OR10G3Q8NGC4 313 aa19.5■□□□□ 0.71
LIME1-204ENST00000476183 PAQR8Q8TEZ7 354 aa19.5■□□□□ 0.71
LIME1-204ENST00000476183 TP53INP1Q96A56 240 aa19.5■□□□□ 0.71
LIME1-204ENST00000476183 EXOSC8Q96B26 276 aaKnown RBP19.5■□□□□ 0.71
LIME1-204ENST00000476183 CTHRC1Q96CG8 243 aa19.5■□□□□ 0.71
LIME1-204ENST00000476183 PROK2Q9HC23 129 aa19.5■□□□□ 0.71
LIME1-204ENST00000476183 PLSCR2Q9NRY7 297 aa19.5■□□□□ 0.71
LIME1-204ENST00000476183 TUBA8Q9NY65 449 aaPredicted RBP19.5■□□□□ 0.71
LIME1-204ENST00000476183 CHCHD2Q9Y6H1 151 aaPredicted RBP19.5■□□□□ 0.71
LIME1-204ENST00000476183 ZNF780BQ9Y6R6 833 aa19.5■□□□□ 0.71
LIME1-204ENST00000476183 CRYBG3Q68DQ2 2970 aa19.49■□□□□ 0.71
LIME1-204ENST00000476183 A0A1B0GTH9 108 aa19.49■□□□□ 0.71
LIME1-204ENST00000476183 CDC40O60508 579 aaKnown RBP eCLIP19.49■□□□□ 0.712e-6■□□□□ 8.5
LIME1-204ENST00000476183 RSL1D1O76021 490 aaKnown RBP19.49■□□□□ 0.71
LIME1-204ENST00000476183 CBX7O95931 251 aa19.49■□□□□ 0.71
LIME1-204ENST00000476183 GPX3P22352 226 aa19.49■□□□□ 0.71
LIME1-204ENST00000476183 PLGLB1Q02325 96 aa19.49■□□□□ 0.71
LIME1-204ENST00000476183 ZNF844Q08AG5 666 aa19.49■□□□□ 0.71
LIME1-204ENST00000476183 IMPG1Q17R60 797 aa19.49■□□□□ 0.71
LIME1-204ENST00000476183 PRSS53Q2L4Q9 553 aa19.49■□□□□ 0.71
LIME1-204ENST00000476183 TRMT12Q53H54 448 aaKnown RBP19.49■□□□□ 0.71
LIME1-204ENST00000476183 SLC22A10Q63ZE4 541 aa19.49■□□□□ 0.71
LIME1-204ENST00000476183 GK5Q6ZS86 529 aa19.49■□□□□ 0.71
LIME1-204ENST00000476183 CCDC116Q8IYX3 515 aa19.49■□□□□ 0.71
LIME1-204ENST00000476183 TAGAPQ8N103 731 aa19.49■□□□□ 0.71
LIME1-204ENST00000476183 FAM13CQ8NE31 585 aa19.49■□□□□ 0.71
LIME1-204ENST00000476183 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.49■□□□□ 0.71
LIME1-204ENST00000476183 DEFB127Q9H1M4 99 aa19.49■□□□□ 0.71
LIME1-204ENST00000476183 ZDHHC11Q9H8X9 412 aa19.49■□□□□ 0.71
LIME1-204ENST00000476183 POLR3HQ9Y535 204 aaPredicted RBP19.49■□□□□ 0.71
LIME1-204ENST00000476183 EXPH5Q8NEV8 1989 aa19.48■□□□□ 0.71
LIME1-204ENST00000476183 AZIN1O14977 448 aa19.48■□□□□ 0.71
LIME1-204ENST00000476183 PDE9AO76083 593 aa19.48■□□□□ 0.71
LIME1-204ENST00000476183 LRATO95237 230 aa19.48■□□□□ 0.71
LIME1-204ENST00000476183 CHRNGP07510 517 aa19.48■□□□□ 0.71
LIME1-204ENST00000476183 ABOP16442 354 aa19.48■□□□□ 0.71
LIME1-204ENST00000476183 PCSK2P16519 638 aa19.48■□□□□ 0.71
LIME1-204ENST00000476183 CASP6P55212 293 aa19.48■□□□□ 0.71
LIME1-204ENST00000476183 MRPS35P82673 323 aaKnown RBP19.48■□□□□ 0.71
LIME1-204ENST00000476183 ZNF763Q0D2J5 394 aa19.48■□□□□ 0.71
LIME1-204ENST00000476183 HEPACAMQ14CZ8 416 aa19.48■□□□□ 0.71
LIME1-204ENST00000476183 NTRK2Q16620 822 aa19.48■□□□□ 0.71
LIME1-204ENST00000476183 ZNF628Q5EBL2 1059 aa19.48■□□□□ 0.71
LIME1-204ENST00000476183 PRAMEF20Q5VT98 475 aa19.48■□□□□ 0.71
LIME1-204ENST00000476183 HLA-DQA1Q5Y7H0 255 aa19.48■□□□□ 0.71
LIME1-204ENST00000476183 DND1Q8IYX4 353 aaKnown RBP19.48■□□□□ 0.71
LIME1-204ENST00000476183 FBXW8Q8N3Y1 598 aa19.48■□□□□ 0.71
LIME1-204ENST00000476183 TMEM251Q8N6I4 163 aa19.48■□□□□ 0.71
LIME1-204ENST00000476183 OR5M3Q8NGP4 307 aa19.48■□□□□ 0.71
LIME1-204ENST00000476183 ITLN2Q8WWU7 325 aaPredicted RBP19.48■□□□□ 0.71
LIME1-204ENST00000476183 SMC6Q96SB8 1091 aa19.48■□□□□ 0.71
LIME1-204ENST00000476183 TRMOQ9BU70 441 aa19.48■□□□□ 0.71
LIME1-204ENST00000476183 NXF5Q9H1B4 397 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms