RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 ZRSR1Q15695 479 aaKnown RBP3.75□□□□□ -1.81
VPS13D-207ENST00000476169 PARP6Q2NL67 630 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 XKR3Q5GH77 459 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 LCN1P1Q5VSP4 162 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 TTC19Q6DKK2 380 aaPredicted RBP3.75□□□□□ -1.81
VPS13D-207ENST00000476169 PYHIN1Q6K0P9 492 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 DOK6Q6PKX4 331 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 DPY19L2P2Q6ZN68 376 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 KIAA1328Q86T90 577 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 SFR1Q86XK3 245 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 WDR49Q8IV35 697 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 ARFGAP2Q8N6H7 521 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 CCDC185Q8N715 623 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 RELL2Q8NC24 303 aaPredicted RBP3.75□□□□□ -1.81
VPS13D-207ENST00000476169 SLC37A3Q8NCC5 494 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 KBTBD8Q8NFY9 601 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 OR2T12Q8NG77 320 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 OR5D13Q8NGL4 314 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 RAB3IL1Q8TBN0 382 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 SPRYD4Q8WW59 207 aaPredicted RBP3.75□□□□□ -1.81
VPS13D-207ENST00000476169 HSD17B8Q92506 261 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 EMG1Q92979 244 aaKnown RBP3.75□□□□□ -1.81
VPS13D-207ENST00000476169 ZNF778Q96MU6 729 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 ZNF385AQ96PM9 386 aaKnown RBP3.75□□□□□ -1.81
VPS13D-207ENST00000476169 UHRF2Q96PU4 802 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 ROPN1BQ9BZX4 212 aaPredicted RBP3.75□□□□□ -1.81
VPS13D-207ENST00000476169 FAM49AQ9H0Q0 323 aaPredicted RBP3.75□□□□□ -1.81
VPS13D-207ENST00000476169 CHMP4BQ9H444 224 aaKnown RBP3.75□□□□□ -1.81
VPS13D-207ENST00000476169 UBTD1Q9HAC8 227 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 UBE2TQ9NPD8 197 aaPredicted RBP3.75□□□□□ -1.81
VPS13D-207ENST00000476169 ECHDC1Q9NTX5 307 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 ZNHIT6Q9NWK9 470 aaKnown RBP3.75□□□□□ -1.81
VPS13D-207ENST00000476169 HACD3Q9P035 362 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 THEGQ9P2T0 379 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 ONECUT1Q9UBC0 465 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 POU2F3Q9UKI9 436 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 PILRBQ9UKJ0 227 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 ZNF346Q9UL40 294 aaKnown RBP3.75□□□□□ -1.81
VPS13D-207ENST00000476169 KIF27Q86VH2 1401 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 ERCC6L2Q5T890 1561 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 KANK1Q14678 1352 aa3.75□□□□□ -1.81
VPS13D-207ENST00000476169 UMODL1Q5DID0 1318 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 TOP2BQ02880 1626 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 CACNA1IQ9P0X4 2223 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 A0A087WUV0 522 aaPredicted RBP3.74□□□□□ -1.81
VPS13D-207ENST00000476169 TRBV5-5A0A0J9YX44 114 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 BTBD17A6NE02 478 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 LRRC30A6NM36 301 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 SNURFLB1AK76 121 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 ZNF587BE7ETH6 402 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 GOLGA8SH3BPF8 625 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 H3BTX0 84 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 M0QX08 132 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 LSM1O15116 133 aaKnown RBP3.74□□□□□ -1.81
VPS13D-207ENST00000476169 EPHB6O15197 1021 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 ZNF264O43296 627 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 ZSCAN12O43309 604 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 RNF13O43567 381 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 XPNPEP2O43895 674 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 FCMRO60667 390 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 KRT33AO76009 404 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 ANXA9O76027 345 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 SCGNO76038 276 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 CHRNA1P02708 482 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 ACAA1P09110 424 aaPredicted RBP3.74□□□□□ -1.81
VPS13D-207ENST00000476169 ALPIP09923 528 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 PABPC4LP0CB38 370 aaKnown RBP3.74□□□□□ -1.81
VPS13D-207ENST00000476169 TROVE2P10155 538 aaKnown RBP eCLIP3.74□□□□□ -1.81
VPS13D-207ENST00000476169 CDH1P12830 882 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 HLA-DOBP13765 273 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 UQCRBP14927 111 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 AMD1P17707 334 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 TPSB2P20231 275 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 MX1P20591 662 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 NMT1P30419 496 aaKnown RBP3.74□□□□□ -1.81
VPS13D-207ENST00000476169 NUP62P37198 522 aaPredicted RBP3.74□□□□□ -1.81
VPS13D-207ENST00000476169 CARD18P57730 90 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 RPS4XP62701 263 aaKnown RBP3.74□□□□□ -1.81
VPS13D-207ENST00000476169 TUBA1BP68363 451 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 NOP14P78316 857 aaKnown RBP3.74□□□□□ -1.81
VPS13D-207ENST00000476169 MAP2K1Q02750 393 aaPredicted RBP3.74□□□□□ -1.81
VPS13D-207ENST00000476169 DNAJC3Q13217 504 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 DRP2Q13474 957 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 IL18Q14116 193 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 MEF2DQ14814 521 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 TPSAB1Q15661 275 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 DCAF12Q5T6F0 453 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 AADACL4Q5VUY2 407 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 TRIM65Q6PJ69 517 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 Q6ZRG5 221 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 SATL1Q86VE3 508 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 ECHDC2Q86YB7 292 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 PLD3Q8IV08 490 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 TMEM123Q8N131 208 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 LRRC75A-AS1Q8N1F1 130 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 MAPKAPK5-AS1Q8N8E1 139 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 RDH11Q8TC12 318 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 ZNF473Q8WTR7 871 aaKnown RBP3.74□□□□□ -1.81
VPS13D-207ENST00000476169 DNAJA4Q8WW22 397 aaPredicted RBP3.74□□□□□ -1.81
VPS13D-207ENST00000476169 SMG7Q92540 1137 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms