RNA–Protein interactions for RNA: ENST00000476106.5

SOD1-204, Transcript of superoxide dismutase 1, humanhuman

TSL 5

Gene SOD1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-204ENST00000476106 REEP4Q9H6H4 257 aa12.77□□□□□ -0.37
SOD1-204ENST00000476106 ANKRA2Q9H9E1 313 aa12.77□□□□□ -0.37
SOD1-204ENST00000476106 CXorf21Q9HAI6 301 aa12.77□□□□□ -0.37
SOD1-204ENST00000476106 BCAP29Q9UHQ4 241 aa12.77□□□□□ -0.37
SOD1-204ENST00000476106 TEKT2Q9UIF3 430 aa12.77□□□□□ -0.37
SOD1-204ENST00000476106 EXO1Q9UQ84 846 aaKnown RBP12.77□□□□□ -0.37
SOD1-204ENST00000476106 GABRR3A8MPY1 467 aa12.76□□□□□ -0.37
SOD1-204ENST00000476106 WWP2O00308 870 aa12.76□□□□□ -0.37
SOD1-204ENST00000476106 SCAMP2O15127 329 aaKnown RBP12.76□□□□□ -0.37
SOD1-204ENST00000476106 DPM1O60762 260 aa12.76□□□□□ -0.37
SOD1-204ENST00000476106 VPS4BO75351 444 aa12.76□□□□□ -0.37
SOD1-204ENST00000476106 NME6O75414 186 aaPredicted RBP12.76□□□□□ -0.37
SOD1-204ENST00000476106 PCSK2P16519 638 aa12.76□□□□□ -0.37
SOD1-204ENST00000476106 SOX8P57073 446 aa12.76□□□□□ -0.37
SOD1-204ENST00000476106 OC90Q02509 493 aaPredicted RBP12.76□□□□□ -0.37
SOD1-204ENST00000476106 NNATQ16517 81 aa12.76□□□□□ -0.37
SOD1-204ENST00000476106 SPRED3Q2MJR0 410 aa12.76□□□□□ -0.37
SOD1-204ENST00000476106 ACER2Q5QJU3 275 aa12.76□□□□□ -0.37
SOD1-204ENST00000476106 HSDL2Q6YN16 418 aa12.76□□□□□ -0.37
SOD1-204ENST00000476106 SZRD1Q7Z422 152 aa12.76□□□□□ -0.37
SOD1-204ENST00000476106 FAM9CQ8IZT9 166 aa12.76□□□□□ -0.37
SOD1-204ENST00000476106 VWA5B2Q8N398 1253 aa12.76□□□□□ -0.37
SOD1-204ENST00000476106 ZADH2Q8N4Q0 377 aa12.76□□□□□ -0.37
SOD1-204ENST00000476106 OR7A2PQ8NGA2 310 aa12.76□□□□□ -0.37
SOD1-204ENST00000476106 OR1N1Q8NGS0 311 aa12.76□□□□□ -0.37
SOD1-204ENST00000476106 TM9SF4Q92544 642 aa12.76□□□□□ -0.37
SOD1-204ENST00000476106 FBXL20Q96IG2 436 aa12.76□□□□□ -0.37
SOD1-204ENST00000476106 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.76□□□□□ -0.37
SOD1-204ENST00000476106 MAT2BQ9NZL9 334 aa12.76□□□□□ -0.37
SOD1-204ENST00000476106 EHD3Q9NZN3 535 aa12.76□□□□□ -0.37
SOD1-204ENST00000476106 ABI3Q9P2A4 366 aa12.76□□□□□ -0.37
SOD1-204ENST00000476106 ANAPC2Q9UJX6 822 aa12.76□□□□□ -0.37
SOD1-204ENST00000476106 FREM3P0C091 2139 aa12.76□□□□□ -0.37
SOD1-204ENST00000476106 DYTNA2CJ06 578 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 C9JVG2 144 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 SLCO1B7G3V0H7 640 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 KLHL41O60662 606 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 ZFAND5O76080 213 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 WDPCPO95876 746 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 ATP1B1P05026 303 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 ALDOCP09972 364 aaKnown RBP12.75□□□□□ -0.37
SOD1-204ENST00000476106 PRPS2P11908 318 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 GPR143P51810 404 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 EMX2Q04743 252 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 BIKQ13323 160 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 MEP1AQ16819 746 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 PGS1Q32NB8 556 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 TMEM198Q66K66 360 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 TMEM107Q6UX40 140 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 SLC29A4Q7RTT9 530 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 ATCAYQ86WG3 371 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 RPS19BP1Q86WX3 136 aaKnown RBP12.75□□□□□ -0.37
SOD1-204ENST00000476106 C9orf40Q8IXQ3 194 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 RBMXL3Q8N7X1 1067 aaKnown RBP12.75□□□□□ -0.37
SOD1-204ENST00000476106 TEX19Q8NA77 164 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 SIMC1Q8NDZ2 872 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.75□□□□□ -0.37
SOD1-204ENST00000476106 ZNF354BQ96LW1 612 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 ZNF681Q96N22 645 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 OR52B2Q96RD2 323 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 NPHS2Q9NP85 383 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 SLAMF7Q9NQ25 335 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 STMN3Q9NZ72 180 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 MAP10Q9P2G4 905 aa12.75□□□□□ -0.37
SOD1-204ENST00000476106 NCKAP5O14513 1909 aa12.74□□□□□ -0.37
SOD1-204ENST00000476106 FCHO1O14526 889 aa12.74□□□□□ -0.37
SOD1-204ENST00000476106 ITGA10O75578 1167 aa12.74□□□□□ -0.37
SOD1-204ENST00000476106 OR2J2O76002 312 aa12.74□□□□□ -0.37
SOD1-204ENST00000476106 GPC1P35052 558 aa12.74□□□□□ -0.37
SOD1-204ENST00000476106 MC3RP41968 323 aa12.74□□□□□ -0.37
SOD1-204ENST00000476106 AQP5P55064 265 aa12.74□□□□□ -0.37
SOD1-204ENST00000476106 MLF1P58340 268 aa12.74□□□□□ -0.37
SOD1-204ENST00000476106 RNF4P78317 190 aa12.74□□□□□ -0.37
SOD1-204ENST00000476106 PRICKLE4Q2TBC4 344 aa12.74□□□□□ -0.37
SOD1-204ENST00000476106 TRMT12Q53H54 448 aaKnown RBP12.74□□□□□ -0.37
SOD1-204ENST00000476106 HLA-DQA1Q5Y7H0 255 aa12.74□□□□□ -0.37
SOD1-204ENST00000476106 SLC6A19Q695T7 634 aa12.74□□□□□ -0.37
SOD1-204ENST00000476106 ACAD11Q709F0 780 aa12.74□□□□□ -0.37
SOD1-204ENST00000476106 LARP4Q71RC2 724 aaKnown RBP eCLIP12.74□□□□□ -0.371e-10■■■■□ 23.9
SOD1-204ENST00000476106 ZNF551Q7Z340 670 aaPredicted RBP12.74□□□□□ -0.37
SOD1-204ENST00000476106 R3HCC1LQ7Z5L2 792 aaKnown RBP12.74□□□□□ -0.37
SOD1-204ENST00000476106 SAMD14Q8IZD0 417 aaPredicted RBP12.74□□□□□ -0.37
SOD1-204ENST00000476106 CATSPER1Q8NEC5 780 aa12.74□□□□□ -0.37
SOD1-204ENST00000476106 OR52R1Q8NGF1 315 aa12.74□□□□□ -0.37
SOD1-204ENST00000476106 SUN3Q8TAQ9 357 aa12.74□□□□□ -0.37
SOD1-204ENST00000476106 EBF4Q9BQW3 602 aa12.74□□□□□ -0.37
SOD1-204ENST00000476106 DPY30Q9C005 99 aa12.74□□□□□ -0.37
SOD1-204ENST00000476106 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.74□□□□□ -0.37
SOD1-204ENST00000476106 DCTN4Q9UJW0 460 aa12.74□□□□□ -0.37
SOD1-204ENST00000476106 SHANK1Q9Y566 2161 aa12.74□□□□□ -0.37
SOD1-204ENST00000476106 ZGRF1Q86YA3 2104 aa12.73□□□□□ -0.37
SOD1-204ENST00000476106 E9PBE3 544 aa12.73□□□□□ -0.37
SOD1-204ENST00000476106 POLR3GO15318 223 aaPredicted RBP12.73□□□□□ -0.37
SOD1-204ENST00000476106 CLPSP04118 112 aa12.73□□□□□ -0.37
SOD1-204ENST00000476106 IGKV3-11P04433 115 aa12.73□□□□□ -0.37
SOD1-204ENST00000476106 ABCB1P08183 1280 aaPredicted RBP12.73□□□□□ -0.37
SOD1-204ENST00000476106 VIMP08670 466 aaKnown RBP12.73□□□□□ -0.37
SOD1-204ENST00000476106 LAMP1P11279 417 aa12.73□□□□□ -0.37
SOD1-204ENST00000476106 MPIP34949 423 aa12.73□□□□□ -0.37
SOD1-204ENST00000476106 SLC37A1P57057 533 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms