RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 CCDC71Q8IV32 467 aaPredicted RBP3.32□□□□□ -1.88
SDHB-204ENST00000475049 OR52E1Q8NGJ3 308 aa3.32□□□□□ -1.88
SDHB-204ENST00000475049 KIAA1524Q8TCG1 905 aa3.32□□□□□ -1.88
SDHB-204ENST00000475049 SLC13A3Q8WWT9 602 aa3.32□□□□□ -1.88
SDHB-204ENST00000475049 TOMM40LQ969M1 308 aa3.32□□□□□ -1.88
SDHB-204ENST00000475049 NSMCE2Q96MF7 247 aa3.32□□□□□ -1.88
SDHB-204ENST00000475049 TMEM237Q96Q45 408 aa3.32□□□□□ -1.88
SDHB-204ENST00000475049 SPXQ9BT56 116 aa3.32□□□□□ -1.88
SDHB-204ENST00000475049 TRIM6Q9C030 488 aaPredicted RBP3.32□□□□□ -1.88
SDHB-204ENST00000475049 TNMDQ9H2S6 317 aa3.32□□□□□ -1.88
SDHB-204ENST00000475049 DCTPP1Q9H773 170 aa3.32□□□□□ -1.88
SDHB-204ENST00000475049 KCNN3Q9UGI6 736 aa3.32□□□□□ -1.88
SDHB-204ENST00000475049 RPH3AQ9Y2J0 694 aaPredicted RBP3.32□□□□□ -1.88
SDHB-204ENST00000475049 SLC6A5Q9Y345 797 aa3.32□□□□□ -1.88
SDHB-204ENST00000475049 AFF2P51816 1311 aa3.32□□□□□ -1.88
SDHB-204ENST00000475049 PRG4Q92954 1404 aaPredicted RBP3.32□□□□□ -1.88
SDHB-204ENST00000475049 EPRSP07814 1512 aaKnown RBP3.32□□□□□ -1.88
SDHB-204ENST00000475049 ALKQ9UM73 1620 aa3.32□□□□□ -1.88
SDHB-204ENST00000475049 TTC37Q6PGP7 1564 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 CFAP73A6NFT4 308 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 RNF212BA8MTL3 300 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 TXNL1O43396 289 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 TSPAN2O60636 221 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 GALR3O60755 368 aaPredicted RBP3.31□□□□□ -1.88
SDHB-204ENST00000475049 IGHG1P01857 330 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 ALPPP05187 535 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 GSTA1P08263 222 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 ALPPL2P10696 532 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 KRT5P13647 590 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 SFNP31947 248 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 GSK3BP49841 420 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 CCL11P51671 97 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 SLC7A2P52569 658 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 NDST1P52848 882 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 SLC8A3P57103 927 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 NME3Q13232 169 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 CLPPQ16740 277 aaPredicted RBP3.31□□□□□ -1.88
SDHB-204ENST00000475049 CNPY1Q3B7I2 92 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 OR6B2Q6IFH4 312 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 FBXL22Q6P050 247 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 PLBD1Q6P4A8 553 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 WDR88Q6ZMY6 472 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 LUZP1Q86V48 1076 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 PHC2Q8IXK0 858 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 LMNTD2Q8IXW0 634 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 ZNRF1Q8ND25 227 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 OR4F5Q8NH21 305 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 FAM222BQ8WU58 562 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 TAF15Q92804 592 aaKnown RBP eCLIP3.31□□□□□ -1.88
SDHB-204ENST00000475049 PNPLA2Q96AD5 504 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 RBM18Q96H35 190 aaKnown RBP3.31□□□□□ -1.88
SDHB-204ENST00000475049 DEFB118Q96PH6 123 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 COQ7Q99807 217 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 RAB11FIP5Q9BXF6 653 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 PUS3Q9BZE2 481 aaKnown RBP3.31□□□□□ -1.88
SDHB-204ENST00000475049 RNF41Q9H4P4 317 aaPredicted RBP3.31□□□□□ -1.88
SDHB-204ENST00000475049 IL1RL2Q9HB29 575 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 DNPEPQ9ULA0 475 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 CCPG1Q9ULG6 757 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 PCNX3Q9H6A9 2034 aa3.31□□□□□ -1.88
SDHB-204ENST00000475049 CPS1P31327 1500 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 CFTRP13569 1480 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 RGS12O14924 1447 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 A0A0U1RRA0 63 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 LRP3O75074 770 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 FRAT2O75474 233 aaPredicted RBP3.3□□□□□ -1.88
SDHB-204ENST00000475049 MT-ATP6P00846 226 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 PGK2P07205 417 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 FCGR3AP08637 254 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 HOXD4P09016 255 aaPredicted RBP3.3□□□□□ -1.88
SDHB-204ENST00000475049 FOSL2P15408 326 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 TMOD1P28289 359 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 NPY2RP49146 381 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 COX10Q12887 443 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 HKDC1Q2TB90 917 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 LEMD1Q68G75 181 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 REP15Q6BDI9 236 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 ARMCX5Q6P1M9 558 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 ABRAXAS1Q6UWZ7 409 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 MFSD7Q6UXD7 560 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 MYPOPQ86VE0 399 aaPredicted RBP3.3□□□□□ -1.88
SDHB-204ENST00000475049 SLC22A16Q86VW1 577 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 LRRC49Q8IUZ0 686 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 PYROXD2Q8N2H3 581 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 LRRC17Q8N6Y2 441 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 MLKLQ8NB16 471 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 C17orf47Q8NEP4 570 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 BEST4Q8NFU0 473 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 TMEM37Q8WXS4 190 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 PHYHIPQ92561 330 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 TMEM45BQ96B21 275 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 SIRPDQ9H106 197 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 Q9HAA7 133 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 GNB4Q9HAV0 340 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.3□□□□□ -1.88
SDHB-204ENST00000475049 TUBGCP4Q9UGJ1 667 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 ODF2LQ9ULJ1 636 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 SPATA2Q9UM82 520 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 PLA2G4CQ9UP65 541 aa3.3□□□□□ -1.88
SDHB-204ENST00000475049 NUDCQ9Y266 331 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms