RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 ZANQ9Y493 2812 aa12.8□□□□□ -0.36
CCDC78-209ENST00000474647 ANKRD33BA6NCL7 494 aa12.79□□□□□ -0.36
CCDC78-209ENST00000474647 MBD3L4A6NDZ8 208 aaPredicted RBP12.79□□□□□ -0.36
CCDC78-209ENST00000474647 MBD3L3A6NE82 208 aaPredicted RBP12.79□□□□□ -0.36
CCDC78-209ENST00000474647 FAM187AA6NFU0 413 aa12.79□□□□□ -0.36
CCDC78-209ENST00000474647 MBD3L5A6NJ08 208 aaPredicted RBP12.79□□□□□ -0.36
CCDC78-209ENST00000474647 EFCAB8A8MWE9 144 aa12.79□□□□□ -0.36
CCDC78-209ENST00000474647 E7ESA3 106 aa12.79□□□□□ -0.36
CCDC78-209ENST00000474647 K7EPI3 171 aa12.79□□□□□ -0.36
CCDC78-209ENST00000474647 RAD51CO43502 376 aa12.79□□□□□ -0.36
CCDC78-209ENST00000474647 ERN1O75460 977 aaKnown RBP12.79□□□□□ -0.36
CCDC78-209ENST00000474647 EEDO75530 441 aaKnown RBP12.79□□□□□ -0.36
CCDC78-209ENST00000474647 TMIGD3P0DMS9 266 aaPredicted RBP12.79□□□□□ -0.36
CCDC78-209ENST00000474647 EPB42P16452 691 aa12.79□□□□□ -0.36
CCDC78-209ENST00000474647 BMP7P18075 431 aa12.79□□□□□ -0.36
CCDC78-209ENST00000474647 SSTR1P30872 391 aa12.79□□□□□ -0.36
CCDC78-209ENST00000474647 HOXC12P31275 282 aa12.79□□□□□ -0.36
CCDC78-209ENST00000474647 NRG3P56975 720 aa12.79□□□□□ -0.36
CCDC78-209ENST00000474647 RPS13P62277 151 aaKnown RBP12.79□□□□□ -0.36
CCDC78-209ENST00000474647 NKX6-1P78426 367 aaPredicted RBP12.79□□□□□ -0.36
CCDC78-209ENST00000474647 PHEXP78562 749 aa12.79□□□□□ -0.36
CCDC78-209ENST00000474647 ILF2Q12905 390 aaKnown RBP12.79□□□□□ -0.36
CCDC78-209ENST00000474647 E2F2Q14209 437 aa12.79□□□□□ -0.36
CCDC78-209ENST00000474647 SLMAPQ14BN4 828 aa12.79□□□□□ -0.36
CCDC78-209ENST00000474647 C8orf74Q6P047 294 aa12.79□□□□□ -0.36
CCDC78-209ENST00000474647 RAPH1Q70E73 1250 aa12.79□□□□□ -0.36
CCDC78-209ENST00000474647 LUZP2Q86TE4 346 aa12.79□□□□□ -0.36
CCDC78-209ENST00000474647 C9orf106Q8NAJ2 232 aa12.79□□□□□ -0.36
CCDC78-209ENST00000474647 MBD3L2Q8NHZ7 208 aaPredicted RBP12.79□□□□□ -0.36
CCDC78-209ENST00000474647 SPPL2AQ8TCT8 520 aa12.79□□□□□ -0.36
CCDC78-209ENST00000474647 PYROXD1Q8WU10 500 aa12.79□□□□□ -0.36
CCDC78-209ENST00000474647 ABTB1Q969K4 478 aaPredicted RBP12.79□□□□□ -0.36
CCDC78-209ENST00000474647 GPR22Q99680 433 aa12.79□□□□□ -0.36
CCDC78-209ENST00000474647 CPNE1Q99829 537 aa12.79□□□□□ -0.36
CCDC78-209ENST00000474647 RBM24Q9BX46 236 aaKnown RBP12.79□□□□□ -0.36
CCDC78-209ENST00000474647 UBQLN3Q9H347 655 aa12.79□□□□□ -0.36
CCDC78-209ENST00000474647 ZNF395Q9H8N7 513 aaPredicted RBP12.79□□□□□ -0.36
CCDC78-209ENST00000474647 LYARQ9NX58 379 aaKnown RBP12.79□□□□□ -0.36
CCDC78-209ENST00000474647 ADGRE2Q9UHX3 823 aa12.79□□□□□ -0.36
CCDC78-209ENST00000474647 RAI1Q7Z5J4 1906 aaPredicted RBP12.79□□□□□ -0.36
CCDC78-209ENST00000474647 PCNX3Q9H6A9 2034 aa12.79□□□□□ -0.36
CCDC78-209ENST00000474647 A0A1W2PS29 197 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 CD8B2A6NJW9 211 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 TMPRSS11DO60235 418 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 SNX4O95219 450 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 AIFM1O95831 613 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 CYP4B1P13584 511 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 KRT15P19012 456 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 RPP38P78345 283 aaKnown RBP12.78□□□□□ -0.36
CCDC78-209ENST00000474647 SETDB1Q15047 1291 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 NNATQ16517 81 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 C6orf163Q5TEZ5 329 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 FNDC7Q5VTL7 733 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 ANGPTL8Q6UXH0 198 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 CMC1Q7Z7K0 106 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 YRDCQ86U90 279 aaKnown RBP12.78□□□□□ -0.36
CCDC78-209ENST00000474647 CTAGE3PQ8IX95 158 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 GALNT12Q8IXK2 581 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 TEX9Q8N6V9 391 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 LRRN4CLQ8ND94 238 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 FAM83FQ8NEG4 500 aaPredicted RBP12.78□□□□□ -0.36
CCDC78-209ENST00000474647 STAG3L4Q8TBR4 150 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 UBTD2Q8WUN7 234 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 UCN3Q969E3 161 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 WDYHV1Q96HA8 205 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 UBXN10Q96LJ8 280 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 ANGPTL4Q9BY76 406 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 METTL7AQ9H8H3 244 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 RYDENQ9NUL5 291 aaKnown RBP12.78□□□□□ -0.36
CCDC78-209ENST00000474647 BEX4Q9NWD9 120 aaPredicted RBP12.78□□□□□ -0.36
CCDC78-209ENST00000474647 GALNT8Q9NY28 637 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 ASB4Q9Y574 426 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 RTTNQ86VV8 2226 aa12.78□□□□□ -0.36
CCDC78-209ENST00000474647 FN1P02751 2386 aaKnown RBP12.78□□□□□ -0.36
CCDC78-209ENST00000474647 A0A0A6YYD5 115 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 A0A1W2PR48 441 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 SH3D21A4FU49 640 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 H0Y3Z8 333 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 TP73O15350 636 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 KERAO60938 352 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 GOSR1O95249 250 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 SLU7O95391 586 aaKnown RBP12.77□□□□□ -0.37
CCDC78-209ENST00000474647 GBAP04062 536 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 HRGP04196 525 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 CT62P0C5K7 136 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 FAM58BPP0C7Q3 252 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 SLC35E2BP0CK96 405 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 SLC35E2P0CK97 266 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 CD53P19397 219 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 PIK3R1P27986 724 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 GCKP35557 465 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 GP5P40197 560 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 PIK3CBP42338 1070 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 CASP3P42574 277 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 NAGLUP54802 743 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 PCDH1Q08174 1060 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 FOXF2Q12947 444 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 ZKSCAN8Q15776 578 aaPredicted RBP12.77□□□□□ -0.37
CCDC78-209ENST00000474647 KBTBD12Q3ZCT8 623 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 GLE1Q53GS7 698 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms