RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 SLC19A2O60779 497 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 OAZ2O95190 189 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 ZNF8P17098 575 aaPredicted RBP17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 B4GALNT1Q00973 533 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 BCL2L1Q07817 233 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 DSC1Q08554 894 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 FAM110CQ1W6H9 321 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 RPS26P11Q5JNZ5 115 aaPredicted RBP17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 SHFQ7M4L6 423 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 MS4A15Q8N5U1 240 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 HSD17B8Q92506 261 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 RFT1Q96AA3 541 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 OTUB1Q96FW1 271 aaPredicted RBP17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 WBP1Q96G27 269 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 UROC1Q96N76 676 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 ARHGAP9Q9BRR9 750 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 RSPO3Q9BXY4 272 aaPredicted RBP17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 GSX2Q9BZM3 304 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 TBC1D17Q9HA65 648 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 NOD1Q9Y239 953 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 KPNA5O15131 536 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 SH3BP5O60239 455 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 UGDHO60701 494 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 TIA1P31483 386 aaKnown RBP eCLIP17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 DCDC1P59894 354 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 NTRK2Q16620 822 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 MPEG1Q2M385 716 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 GPR33Q49SQ1 333 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 SPIN4Q56A73 249 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 SLC25A30Q5SVS4 291 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 CXorf57Q6NSI4 855 aaKnown RBP17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 ACSM5Q6NUN0 579 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 KIAA0907Q7Z7F0 614 aaPredicted RBP17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 ST8SIA4Q92187 359 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 SLC9A6Q92581 669 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 FGF11Q92914 225 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 RNFT2Q96EX2 444 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 LINC00052Q96N35 136 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 TM6SF2Q9BZW4 377 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 RETREG1Q9H6L5 497 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 SGK2Q9HBY8 427 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 LYARQ9NX58 379 aaKnown RBP17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 GULP1Q9UBP9 304 aa17.63■□□□□ 0.41
ECHDC1-214ENST00000474289 LOC105369274A0A096LPK9 316 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 C2orf92A0A1B0GVN3 265 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 GABRPO00591 440 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 GBAP04062 536 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 IFNA16P05015 189 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 ACSM4P0C7M7 580 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 LIMS3P0CW19 117 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 LIMS4P0CW20 117 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 CFL1P23528 166 aaKnown RBP17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 SPAM1P38567 509 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 THPOP40225 353 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 SLC11A2P49281 568 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 ACLYP53396 1101 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 MC1RQ01726 317 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 CHMP1BQ7LBR1 199 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 RBM45Q8IUH3 476 aaKnown RBP17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 OR4N4Q8N0Y3 316 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 SLC7A13Q8TCU3 470 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 NXPE2Q96DL1 559 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 MS4A3Q96HJ5 214 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 PTPN18Q99952 460 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 REEP4Q9H6H4 257 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 ATP6V1HQ9UI12 483 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 SLC45A1Q9Y2W3 748 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 MAB21L2Q9Y586 359 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 CACNG2Q9Y698 323 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 RNF215Q9Y6U7 377 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 H1F0P07305 194 aaKnown RBP17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 ACP2P11117 423 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 ZP3P21754 424 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 DNASE1P24855 282 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 HNF1BP35680 557 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 DGKGP49619 791 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 RAB40BQ12829 278 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 MAP2K5Q13163 448 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 GINS1Q14691 196 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 ZMYND11Q15326 602 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 CDKN3Q16667 212 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 DUSP6Q16828 381 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 NDUFAF5Q5TEU4 345 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 GPR32P1Q8NGA4 272 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 OR10Z1Q8NGY1 313 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 NLNQ9BYT8 704 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 BRF2Q9HAW0 419 aa17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 FGF20Q9NP95 211 aaPredicted RBP17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 IMP3Q9NV31 184 aaKnown RBP17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 PRG3Q9Y2Y8 225 aaPredicted RBP17.62■□□□□ 0.41
ECHDC1-214ENST00000474289 TEX13CA0A0J9YWL9 993 aa17.61■□□□□ 0.41
ECHDC1-214ENST00000474289 PCP4L1A6NKN8 68 aa17.61■□□□□ 0.41
ECHDC1-214ENST00000474289 H0YIV9 168 aa17.61■□□□□ 0.41
ECHDC1-214ENST00000474289 SOAT1P35610 550 aa17.61■□□□□ 0.41
ECHDC1-214ENST00000474289 RAB8AP61006 207 aa17.61■□□□□ 0.41
ECHDC1-214ENST00000474289 SEMG2Q02383 582 aa17.61■□□□□ 0.41
ECHDC1-214ENST00000474289 CRYZQ08257 329 aaKnown RBP17.61■□□□□ 0.41
ECHDC1-214ENST00000474289 C2orf80Q0P641 193 aa17.61■□□□□ 0.41
ECHDC1-214ENST00000474289 MORN1Q5T089 497 aa17.61■□□□□ 0.41
ECHDC1-214ENST00000474289 DEF8Q6ZN54 512 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms