RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 HYAL4Q2M3T9 481 aa10.31□□□□□ -0.76
CKS1B-206ENST00000474215 PRICKLE4Q2TBC4 344 aa10.31□□□□□ -0.76
CKS1B-206ENST00000474215 SPDYAQ5MJ70 313 aa10.31□□□□□ -0.76
CKS1B-206ENST00000474215 WDR93Q6P2C0 686 aa10.31□□□□□ -0.76
CKS1B-206ENST00000474215 ARHGAP11AQ6P4F7 1023 aa10.31□□□□□ -0.76
CKS1B-206ENST00000474215 XKRXQ6PP77 449 aa10.31□□□□□ -0.76
CKS1B-206ENST00000474215 FAM111BQ6SJ93 734 aa10.31□□□□□ -0.76
CKS1B-206ENST00000474215 TRIM46Q7Z4K8 759 aa10.31□□□□□ -0.76
CKS1B-206ENST00000474215 VWA5B2Q8N398 1253 aa10.31□□□□□ -0.76
CKS1B-206ENST00000474215 RIBC1Q8N443 379 aaPredicted RBP10.31□□□□□ -0.76
CKS1B-206ENST00000474215 ZNF808Q8N4W9 903 aaPredicted RBP10.31□□□□□ -0.76
CKS1B-206ENST00000474215 ZNF441Q8N8Z8 693 aa10.31□□□□□ -0.76
CKS1B-206ENST00000474215 FAM13CQ8NE31 585 aa10.31□□□□□ -0.76
CKS1B-206ENST00000474215 FAM57AQ8TBR7 257 aa10.31□□□□□ -0.76
CKS1B-206ENST00000474215 AENQ8WTP8 325 aaKnown RBP10.31□□□□□ -0.76
CKS1B-206ENST00000474215 KLHL29Q96CT2 875 aa10.31□□□□□ -0.76
CKS1B-206ENST00000474215 C11orf24Q96F05 449 aaPredicted RBP10.31□□□□□ -0.76
CKS1B-206ENST00000474215 CNRIP1Q96F85 164 aaPredicted RBP10.31□□□□□ -0.76
CKS1B-206ENST00000474215 ZNF681Q96N22 645 aa10.31□□□□□ -0.76
CKS1B-206ENST00000474215 PHF12Q96QT6 1004 aa10.31□□□□□ -0.76
CKS1B-206ENST00000474215 ROPN1BQ9BZX4 212 aaPredicted RBP10.31□□□□□ -0.76
CKS1B-206ENST00000474215 ZDHHC11Q9H8X9 412 aa10.31□□□□□ -0.76
CKS1B-206ENST00000474215 ROPN1Q9HAT0 212 aaPredicted RBP10.31□□□□□ -0.76
CKS1B-206ENST00000474215 IL1RL2Q9HB29 575 aa10.31□□□□□ -0.76
CKS1B-206ENST00000474215 SIRT5Q9NXA8 310 aa10.31□□□□□ -0.76
CKS1B-206ENST00000474215 TUBA8Q9NY65 449 aaPredicted RBP10.31□□□□□ -0.76
CKS1B-206ENST00000474215 HEY2Q9UBP5 337 aa10.31□□□□□ -0.76
CKS1B-206ENST00000474215 UTS2RQ9UKP6 389 aa10.31□□□□□ -0.76
CKS1B-206ENST00000474215 PLLPQ9Y342 182 aa10.31□□□□□ -0.76
CKS1B-206ENST00000474215 NPFFR2Q9Y5X5 522 aa10.31□□□□□ -0.76
CKS1B-206ENST00000474215 CHCHD2Q9Y6H1 151 aaPredicted RBP10.31□□□□□ -0.76
CKS1B-206ENST00000474215 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.31□□□□□ -0.76
CKS1B-206ENST00000474215 CAPN14A8MX76 684 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 E9PLN8 166 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 ADAM10O14672 748 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 CRCPO75575 148 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 IL3P08700 152 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 ANXA4P09525 319 aaPredicted RBP10.3□□□□□ -0.76
CKS1B-206ENST00000474215 AGAP20933 346 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 TIA1P31483 386 aaKnown RBP eCLIP10.3□□□□□ -0.762e-18■■□□□ 13.7
CKS1B-206ENST00000474215 GSTM5P46439 218 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 NRG3P56975 720 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 KCNJ2P63252 427 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 ADORA2A-AS1P86434 159 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 DUSP2Q05923 314 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 IFFO1Q0D2I5 559 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 SLC10A1Q14973 349 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 HEPACAMQ14CZ8 416 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 NTRK2Q16620 822 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 TRMT12Q53H54 448 aaKnown RBP10.3□□□□□ -0.76
CKS1B-206ENST00000474215 LIPMQ5VYY2 423 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 SP5Q6BEB4 398 aaPredicted RBP10.3□□□□□ -0.76
CKS1B-206ENST00000474215 ZNF787Q6DD87 383 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 FAM180BQ6P0A1 224 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 EMBQ6PCB8 327 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 TMEM64Q6YI46 380 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 C3P1Q6ZMU1 363 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 TRABD2AQ86V40 505 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 C10orf107Q8IVU9 208 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 SAMD14Q8IZD0 417 aaPredicted RBP10.3□□□□□ -0.76
CKS1B-206ENST00000474215 SLC34A3Q8N130 599 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 EID3Q8N140 333 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 LRRC25Q8N386 305 aaPredicted RBP10.3□□□□□ -0.76
CKS1B-206ENST00000474215 FBXW8Q8N3Y1 598 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 FAM109AQ8N4B1 249 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 TMEM251Q8N6I4 163 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 BANPQ8N9N5 519 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 C17orf47Q8NEP4 570 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 ADCY4Q8NFM4 1077 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 OR10G3Q8NGC4 313 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 OR5M3Q8NGP4 307 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 C16orf78Q8WTQ4 265 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 ADIPOR1Q96A54 375 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 CTHRC1Q96CG8 243 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 VKORC1Q9BQB6 163 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 SHCBP1LQ9BZQ2 653 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 BRINP2Q9C0B6 783 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 IQCGQ9H095 443 aaKnown RBP10.3□□□□□ -0.76
CKS1B-206ENST00000474215 TNFRSF12AQ9NP84 129 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 MKS1Q9NXB0 559 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 MAT2BQ9NZL9 334 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 BCAP29Q9UHQ4 241 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 LGALS13Q9UHV8 139 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 ZNF639Q9UID6 485 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 MID2Q9UJV3 735 aa10.3□□□□□ -0.76
CKS1B-206ENST00000474215 ANKRD33BA6NCL7 494 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 TP53I11O14683 189 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 TRIM13O60858 407 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 IGHG3P01860 377 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 TPOP07202 933 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 UROSP10746 265 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 GPX3P22352 226 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 SOX18P35713 384 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 MAGEA5P43359 124 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 TMED10P49755 219 aaKnown RBP10.29□□□□□ -0.76
CKS1B-206ENST00000474215 PCLAFQ15004 111 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 EXOSC7Q15024 291 aaKnown RBP10.29□□□□□ -0.76
CKS1B-206ENST00000474215 IMPG1Q17R60 797 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 PRAMEF20Q5VT98 475 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 SRRM1Q8IYB3 904 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms