RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 A0A0G2JMM0 328 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 A0A1W2PPB8 328 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 A0A1W2PRS3 328 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 KIR3DP1A8MWS1 328 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 BIRC5O15392 142 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 ZWINTO95229 277 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 CBX7O95931 251 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 CRYABP02511 175 aaKnown RBP17.5■□□□□ 0.39
PTCD3-210ENST00000473829 SERPINE1P05121 402 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 DDCP20711 480 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 GSTM5P46439 218 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 GPR85P60893 370 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 RPL38P63173 70 aaKnown RBP17.5■□□□□ 0.39
PTCD3-210ENST00000473829 MRPS35P82673 323 aaKnown RBP17.5■□□□□ 0.39
PTCD3-210ENST00000473829 C2orf80Q0P641 193 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 MAP4K2Q12851 820 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 EXOSC7Q15024 291 aaKnown RBP17.5■□□□□ 0.39
PTCD3-210ENST00000473829 RFTN2Q52LD8 501 aaPredicted RBP17.5■□□□□ 0.39
PTCD3-210ENST00000473829 XKR7Q5GH72 579 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 RNFT1Q5M7Z0 435 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 SULF2Q8IWU5 870 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 GPALPP1Q8IXQ4 340 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 CCDC116Q8IYX3 515 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 ANKRD42Q8N9B4 389 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 PSD4Q8NDX1 1056 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 PRR7Q8TB68 274 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 CTHRC1Q96CG8 243 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 TLCD1Q96CP7 247 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 METTL2AQ96IZ6 378 aaKnown RBP17.5■□□□□ 0.39
PTCD3-210ENST00000473829 C3orf30Q96M34 536 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 TSPAN10Q9H1Z9 355 aaPredicted RBP17.5■□□□□ 0.39
PTCD3-210ENST00000473829 ANKRA2Q9H9E1 313 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 PFDN4Q9NQP4 134 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 SLC35C2Q9NQQ7 365 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 EHD3Q9NZN3 535 aa17.5■□□□□ 0.39
PTCD3-210ENST00000473829 KLF13Q9Y2Y9 288 aaPredicted RBP17.5■□□□□ 0.39
PTCD3-210ENST00000473829 TMEM120BA0PK00 339 aa17.49■□□□□ 0.39
PTCD3-210ENST00000473829 PEX1O43933 1283 aa17.49■□□□□ 0.39
PTCD3-210ENST00000473829 SEMA7AO75326 666 aa17.49■□□□□ 0.39
PTCD3-210ENST00000473829 SKAP2O75563 359 aaPredicted RBP17.49■□□□□ 0.39
PTCD3-210ENST00000473829 JUNP05412 331 aaKnown RBP17.49■□□□□ 0.39
PTCD3-210ENST00000473829 PCSK2P16519 638 aa17.49■□□□□ 0.39
PTCD3-210ENST00000473829 SDC1P18827 310 aa17.49■□□□□ 0.39
PTCD3-210ENST00000473829 BGNP21810 368 aa17.49■□□□□ 0.39
PTCD3-210ENST00000473829 RFC3P40938 356 aa17.49■□□□□ 0.39
PTCD3-210ENST00000473829 MEOX1P50221 254 aa17.49■□□□□ 0.39
PTCD3-210ENST00000473829 WDR4P57081 412 aaKnown RBP17.49■□□□□ 0.39
PTCD3-210ENST00000473829 KCNK10P57789 538 aa17.49■□□□□ 0.39
PTCD3-210ENST00000473829 CEBPEQ15744 281 aa17.49■□□□□ 0.39
PTCD3-210ENST00000473829 ZNF791Q3KP31 576 aaPredicted RBP17.49■□□□□ 0.39
PTCD3-210ENST00000473829 TRMT12Q53H54 448 aaKnown RBP17.49■□□□□ 0.39
PTCD3-210ENST00000473829 ZNF628Q5EBL2 1059 aa17.49■□□□□ 0.39
PTCD3-210ENST00000473829 C6orf163Q5TEZ5 329 aa17.49■□□□□ 0.39
PTCD3-210ENST00000473829 OPN5Q6U736 354 aa17.49■□□□□ 0.39
PTCD3-210ENST00000473829 TICAM1Q8IUC6 712 aa17.49■□□□□ 0.39
PTCD3-210ENST00000473829 OR9A2Q8NGT5 310 aa17.49■□□□□ 0.39
PTCD3-210ENST00000473829 C16orf52Q8NHV5 167 aa17.49■□□□□ 0.39
PTCD3-210ENST00000473829 PPP1R14CQ8TAE6 165 aa17.49■□□□□ 0.39
PTCD3-210ENST00000473829 ADIPOR1Q96A54 375 aa17.49■□□□□ 0.39
PTCD3-210ENST00000473829 TIMMDC1Q9NPL8 285 aa17.49■□□□□ 0.39
PTCD3-210ENST00000473829 POLEQ07864 2286 aa17.49■□□□□ 0.39
PTCD3-210ENST00000473829 LRRK2Q5S007 2527 aa17.48■□□□□ 0.39
PTCD3-210ENST00000473829 C2orf92A0A1B0GVN3 265 aa17.48■□□□□ 0.39
PTCD3-210ENST00000473829 PINLYPA6NC86 204 aa17.48■□□□□ 0.39
PTCD3-210ENST00000473829 G3V3Y1 287 aa17.48■□□□□ 0.39
PTCD3-210ENST00000473829 HSPA4LO95757 839 aa17.48■□□□□ 0.39
PTCD3-210ENST00000473829 CCL3P10147 92 aa17.48■□□□□ 0.39
PTCD3-210ENST00000473829 GPX3P22352 226 aa17.48■□□□□ 0.39
PTCD3-210ENST00000473829 NR0B1P51843 470 aaKnown RBP17.48■□□□□ 0.39
PTCD3-210ENST00000473829 ABCE1P61221 599 aaKnown RBP17.48■□□□□ 0.39
PTCD3-210ENST00000473829 MAGOHP61326 146 aaKnown RBP17.48■□□□□ 0.39
PTCD3-210ENST00000473829 GALNTL6Q49A17 601 aa17.48■□□□□ 0.39
PTCD3-210ENST00000473829 TMEM64Q6YI46 380 aa17.48■□□□□ 0.39
PTCD3-210ENST00000473829 RTL4Q6ZR62 310 aa17.48■□□□□ 0.39
PTCD3-210ENST00000473829 IKBIPQ70UQ0 350 aa17.48■□□□□ 0.39
PTCD3-210ENST00000473829 SIAH3Q8IW03 269 aa17.48■□□□□ 0.39
PTCD3-210ENST00000473829 FAM26EQ8N5C1 309 aa17.48■□□□□ 0.39
PTCD3-210ENST00000473829 ZNF781Q8N8C0 355 aa17.48■□□□□ 0.39
PTCD3-210ENST00000473829 FAM98AQ8NCA5 519 aaKnown RBP17.48■□□□□ 0.39
PTCD3-210ENST00000473829 OR7G1Q8NGA0 311 aa17.48■□□□□ 0.39
PTCD3-210ENST00000473829 SLC22A8Q8TCC7 542 aa17.48■□□□□ 0.39
PTCD3-210ENST00000473829 ZNF675Q8TD23 568 aa17.48■□□□□ 0.39
PTCD3-210ENST00000473829 GFM2Q969S9 779 aaKnown RBP17.48■□□□□ 0.39
PTCD3-210ENST00000473829 SORT1Q99523 831 aa17.48■□□□□ 0.39
PTCD3-210ENST00000473829 CCT7Q99832 543 aa17.48■□□□□ 0.39
PTCD3-210ENST00000473829 STMN4Q9H169 189 aaPredicted RBP17.48■□□□□ 0.39
PTCD3-210ENST00000473829 MIEF1Q9NQG6 463 aa17.48■□□□□ 0.39
PTCD3-210ENST00000473829 ENTPD4Q9Y227 616 aa17.48■□□□□ 0.39
PTCD3-210ENST00000473829 ATP6AP2A0A1C7CYW4 349 aa17.47■□□□□ 0.39
PTCD3-210ENST00000473829 TMEM114B3SHH9 223 aa17.47■□□□□ 0.39
PTCD3-210ENST00000473829 ATP6AP2O75787 350 aa17.47■□□□□ 0.39
PTCD3-210ENST00000473829 UNC5CO95185 931 aa17.47■□□□□ 0.39
PTCD3-210ENST00000473829 RNF224P0DH78 156 aa17.47■□□□□ 0.39
PTCD3-210ENST00000473829 ALDH6A1Q02252 535 aaKnown RBP17.47■□□□□ 0.39
PTCD3-210ENST00000473829 UBAP2LQ14157 1087 aaKnown RBP17.47■□□□□ 0.39
PTCD3-210ENST00000473829 ELOAQ14241 798 aaKnown RBP17.47■□□□□ 0.39
PTCD3-210ENST00000473829 ANKRD26P1Q6NSI1 321 aa17.47■□□□□ 0.39
PTCD3-210ENST00000473829 SLC15A4Q8N697 577 aa17.47■□□□□ 0.39
PTCD3-210ENST00000473829 GOLM1Q8NBJ4 401 aa17.47■□□□□ 0.39
PTCD3-210ENST00000473829 OR52R1Q8NGF1 315 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms