RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 CAMKMTQ7Z624 323 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 PTRH1Q86Y79 214 aaKnown RBP13.97□□□□□ -0.17
LMNA-213ENST00000473598 CARFQ8N187 725 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 DNAJC22Q8N4W6 341 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 ZNF655Q8N720 491 aaPredicted RBP13.97□□□□□ -0.17
LMNA-213ENST00000473598 AMER3Q8N944 861 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 TM4SF18Q96CE8 201 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 MAGED4Q96JG8 741 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 TRIM15Q9C019 465 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 C12orf4Q9NQ89 552 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 DIABLOQ9NR28 239 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 EGFL7Q9UHF1 273 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 ATP6V1HQ9UI12 483 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 MN1Q10571 1320 aaPredicted RBP13.97□□□□□ -0.17
LMNA-213ENST00000473598 IGHV5-51A0A0C4DH38 117 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 CPED1A4D0V7 1026 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 ISPDA4D126 451 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 HCRTR1O43613 425 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 TMPRSS11DO60235 418 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 IL3P08700 152 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 ZNF883P0CG24 379 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 SMIM10L1P0DMW3 83 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 HIST1H1TP22492 207 aaPredicted RBP13.97□□□□□ -0.17
LMNA-213ENST00000473598 ATP5A1P25705 553 aaKnown RBP13.97□□□□□ -0.17
LMNA-213ENST00000473598 RPL3P39023 403 aaKnown RBP13.97□□□□□ -0.17
LMNA-213ENST00000473598 EEFSECP57772 596 aaKnown RBP13.97□□□□□ -0.17
LMNA-213ENST00000473598 RAB8AP61006 207 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 TRA2BP62995 288 aaKnown RBP13.97□□□□□ -0.17
LMNA-213ENST00000473598 MC1RQ01726 317 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 LIPEQ05469 1076 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 OR4F3Q6IEY1 312 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 WDR74Q6RFH5 385 aaPredicted RBP13.97□□□□□ -0.17
LMNA-213ENST00000473598 MSANTD1Q6ZTZ1 278 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 R3HCC1LQ7Z5L2 792 aaKnown RBP13.97□□□□□ -0.17
LMNA-213ENST00000473598 ZCCHC7Q8N3Z6 543 aaKnown RBP13.97□□□□□ -0.17
LMNA-213ENST00000473598 OR8K5Q8NH50 307 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 UTP15Q8TED0 518 aaKnown RBP13.97□□□□□ -0.17
LMNA-213ENST00000473598 CANT1Q8WVQ1 401 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 LRTOMTQ8WZ04 291 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 GTF2H4Q92759 462 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 MTERF3Q96E29 417 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 SMIM10Q96HG1 83 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 CHRNA10Q9GZZ6 450 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 MUC13Q9H3R2 512 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 C8orf4Q9NR00 106 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 CCM2LQ9NUG4 571 aaPredicted RBP13.97□□□□□ -0.17
LMNA-213ENST00000473598 BTBD3Q9Y2F9 522 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 PCDHGA8Q9Y5G5 932 aa13.97□□□□□ -0.17
LMNA-213ENST00000473598 SNPHO15079 494 aa13.96□□□□□ -0.17
LMNA-213ENST00000473598 ARPC2O15144 300 aa13.96□□□□□ -0.17
LMNA-213ENST00000473598 KRT8P05787 483 aa13.96□□□□□ -0.17
LMNA-213ENST00000473598 FURINP09958 794 aa13.96□□□□□ -0.17
LMNA-213ENST00000473598 ZNF888P0CJ79 500 aaPredicted RBP13.96□□□□□ -0.17
LMNA-213ENST00000473598 CSF2RBP32927 897 aa13.96□□□□□ -0.17
LMNA-213ENST00000473598 CASP3P42574 277 aa13.96□□□□□ -0.17
LMNA-213ENST00000473598 NKX2-5P52952 324 aaPredicted RBP13.96□□□□□ -0.17
LMNA-213ENST00000473598 RAD23AP54725 363 aa13.96□□□□□ -0.17
LMNA-213ENST00000473598 VSX2P58304 361 aaPredicted RBP13.96□□□□□ -0.17
LMNA-213ENST00000473598 IFITM3Q01628 133 aa13.96□□□□□ -0.17
LMNA-213ENST00000473598 DNASE1L3Q13609 305 aa13.96□□□□□ -0.17
LMNA-213ENST00000473598 PDE7AQ13946 482 aa13.96□□□□□ -0.17
LMNA-213ENST00000473598 DUSP7Q16829 419 aa13.96□□□□□ -0.17
LMNA-213ENST00000473598 DEFB110Q30KQ9 67 aa13.96□□□□□ -0.17
LMNA-213ENST00000473598 CPTPQ5TA50 214 aa13.96□□□□□ -0.17
LMNA-213ENST00000473598 NDUFAF5Q5TEU4 345 aa13.96□□□□□ -0.17
LMNA-213ENST00000473598 USP53Q70EK8 1073 aa13.96□□□□□ -0.17
LMNA-213ENST00000473598 DGLUCYQ7Z3D6 616 aa13.96□□□□□ -0.17
LMNA-213ENST00000473598 BTLAQ7Z6A9 289 aa13.96□□□□□ -0.17
LMNA-213ENST00000473598 SLC22A16Q86VW1 577 aa13.96□□□□□ -0.17
LMNA-213ENST00000473598 SPPL2CQ8IUH8 684 aa13.96□□□□□ -0.17
LMNA-213ENST00000473598 MCATQ8IVS2 390 aaKnown RBP13.96□□□□□ -0.17
LMNA-213ENST00000473598 ACOT4Q8N9L9 421 aa13.96□□□□□ -0.17
LMNA-213ENST00000473598 NAT6Q93015 286 aa13.96□□□□□ -0.17
LMNA-213ENST00000473598 COQ8BQ96D53 544 aa13.96□□□□□ -0.17
LMNA-213ENST00000473598 CCDC3Q9BQI4 270 aa13.96□□□□□ -0.17
LMNA-213ENST00000473598 DUSP26Q9BV47 211 aa13.96□□□□□ -0.17
LMNA-213ENST00000473598 IL20Q9NYY1 176 aa13.96□□□□□ -0.17
LMNA-213ENST00000473598 ADAMTS20P59510 1910 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 SRPX2O60687 465 aaPredicted RBP13.95□□□□□ -0.18
LMNA-213ENST00000473598 SCELO95171 688 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 KCNH1O95259 989 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 LAMP1P11279 417 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 MLLT3P42568 568 aaPredicted RBP13.95□□□□□ -0.18
LMNA-213ENST00000473598 GABRA4P48169 554 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 HLCSP50747 726 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 WNT3P56703 355 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 TAGLNQ01995 201 aaKnown RBP13.95□□□□□ -0.18
LMNA-213ENST00000473598 SQSTM1Q13501 440 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 SLC9A5Q14940 896 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 HEPACAMQ14CZ8 416 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 PROX2Q3B8N5 592 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 ZBTB49Q6ZSB9 765 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 ABHD13Q7L211 337 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 CSNK1A1LQ8N752 337 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 LILRB1Q8NHL6 650 aaPredicted RBP13.95□□□□□ -0.18
LMNA-213ENST00000473598 KCTD14Q9BQ13 255 aaPredicted RBP13.95□□□□□ -0.18
LMNA-213ENST00000473598 NLNQ9BYT8 704 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 SLA2Q9H6Q3 261 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 PDE7BQ9NP56 450 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 SERHLQ9NQF3 203 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms