RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 DIRAS3O95661 229 aa12.68□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 ABOP16442 354 aa12.68□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 GJA5P36382 358 aa12.68□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 HNRNPA0Q13151 305 aaKnown RBP12.68□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 SERINC3Q13530 473 aa12.68□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 VGLL2Q8N8G2 317 aa12.68□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 RAB2BQ8WUD1 216 aa12.68□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 C2orf42Q9NWW7 574 aa12.68□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 F5H5K5 113 aa12.68□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 MAPK3P27361 379 aaPredicted RBP12.68□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 FABP6P51161 128 aa12.68□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CRYZQ08257 329 aaKnown RBP12.68□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 LRRN1Q6UXK5 716 aa12.68□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 LHFPL3Q86UP9 236 aa12.68□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 EGFL6Q8IUX8 553 aa12.68□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CMIPQ8IY22 773 aa12.68□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 KCNN1Q92952 543 aa12.68□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 HSH2DQ96JZ2 352 aa12.68□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 C7orf26Q96N11 449 aa12.68□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CGREF1Q99674 301 aa12.68□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 G6PC3Q9BUM1 346 aa12.68□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 SLC39A1Q9NY26 324 aa12.68□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 RNF215Q9Y6U7 377 aa12.68□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 VWDEQ8N2E2 1590 aa12.68□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 TRBV2A0A0J9YWF9 115 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CD9P21926 228 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 SOX3P41225 446 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 EPHA4P54764 986 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 NFE2L1Q14494 772 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 HYAL4Q2M3T9 481 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CYBRD1Q53TN4 286 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 C6orf132Q5T0Z8 1188 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 FBXL8Q96CD0 374 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 THOC3Q96J01 351 aaKnown RBP12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 ACTR6Q9GZN1 396 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 PRODH2Q9UF12 536 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 TSTD3H0UI37 97 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 IFNA1P01562 189 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 DHRS4L1P0CG22 281 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 TMEM225BP0DP42 221 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 SLC18A2Q05940 514 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 KIAA0930Q6ICG6 404 aaPredicted RBP12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 YTHDF3Q7Z739 585 aaKnown RBP12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 NPAS3Q8IXF0 933 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 C10orf82Q8WW14 230 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 AURKBQ96GD4 344 aaPredicted RBP12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 OR5B2Q96R09 309 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 HEPACAM2A8MVW5 462 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 FTCDNL1E5RQL4 147 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CREG1O75629 220 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 GPR4P46093 362 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 HTD2P86397 168 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 SKA3Q8IX90 412 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CSNK1A1LQ8N752 337 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 ZNF454Q8N9F8 522 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 OR56A3Q8NH54 315 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 FAM83CQ9BQN1 747 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 ACSL5Q9ULC5 683 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 SCN9AQ15858 1988 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CADP27708 2225 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 RAD1O60671 282 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 NFATC4Q14934 902 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 GRIN2CQ14957 1233 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CDH20Q9HBT6 801 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 SLAMF7Q9NQ25 335 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 HSPB11Q9Y547 144 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CHD3Q12873 2000 aaKnown RBP12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 TSPAN6O43657 245 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 SHMT2P34897 504 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 PRMT2P55345 433 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 DAG1Q14118 895 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CLEC1AQ8NC01 280 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 IL17FQ96PD4 163 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 LMF1Q96S06 567 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 LIN7CQ9NUP9 197 aaKnown RBP12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 TMEM184CQ9NVA4 438 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 MYO7BQ6PIF6 2116 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 FAM171A2A8MVW0 826 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 F5H0A9 414 aaPredicted RBP12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 TGM6O95932 706 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 BMP1P13497 986 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 OR52W1Q6IF63 320 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 TMEM80Q96HE8 168 aa12.67□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 PLSCR5A0PG75 271 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 LRRC10BA6NIK2 292 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CXorf49A8MYA2 514 aaPredicted RBP12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 SEC14L6B5MCN3 397 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 DPH3Q96FX2 82 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 DNAJB4Q9UDY4 337 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 SCML2Q9UQR0 700 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 KCNC1P48547 511 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 ZNF805Q5CZA5 627 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 GLT8D1Q68CQ7 371 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 TMEM151AQ8N4L1 468 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 RETREG1Q9H6L5 497 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 RARRES3Q9UL19 164 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 HHEXQ03014 270 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 FGL1Q08830 312 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms