RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 TAMM41Q96BW9 452 aa8.8□□□□□ -1
VPS52-216ENST00000471309 GIMAP5Q96F15 307 aa8.8□□□□□ -1
VPS52-216ENST00000471309 PEX11GQ96HA9 241 aa8.8□□□□□ -1
VPS52-216ENST00000471309 BTBD9Q96Q07 612 aa8.8□□□□□ -1
VPS52-216ENST00000471309 CIB1Q99828 191 aa8.8□□□□□ -1
VPS52-216ENST00000471309 NDC1Q9BTX1 674 aa8.8□□□□□ -1
VPS52-216ENST00000471309 DOHHQ9BU89 302 aa8.8□□□□□ -1
VPS52-216ENST00000471309 MFRPQ9BY79 579 aa8.8□□□□□ -1
VPS52-216ENST00000471309 IL1RAPQ9NPH3 570 aa8.8□□□□□ -1
VPS52-216ENST00000471309 DNAJB9Q9UBS3 223 aa8.8□□□□□ -1
VPS52-216ENST00000471309 ZNF639Q9UID6 485 aa8.8□□□□□ -1
VPS52-216ENST00000471309 SERTAD3Q9UJW9 196 aa8.8□□□□□ -1
VPS52-216ENST00000471309 RAB23Q9ULC3 237 aa8.8□□□□□ -1
VPS52-216ENST00000471309 ATXN7L1Q9ULK2 861 aaPredicted RBP8.8□□□□□ -1
VPS52-216ENST00000471309 C19orf53Q9UNZ5 99 aaPredicted RBP8.8□□□□□ -1
VPS52-216ENST00000471309 LRCH1Q9Y2L9 728 aa8.8□□□□□ -1
VPS52-216ENST00000471309 IGHV5-10-1A0A0J9YXX1 117 aa8.79□□□□□ -1
VPS52-216ENST00000471309 A0A1B0GX78 115 aa8.79□□□□□ -1
VPS52-216ENST00000471309 SAC3D1A6NKF1 404 aa8.79□□□□□ -1
VPS52-216ENST00000471309 DUXAA6NLW8 204 aa8.79□□□□□ -1
VPS52-216ENST00000471309 A8MU76 341 aa8.79□□□□□ -1
VPS52-216ENST00000471309 TMEM229AB2RXF0 380 aa8.79□□□□□ -1
VPS52-216ENST00000471309 D6RAR5 112 aa8.79□□□□□ -1
VPS52-216ENST00000471309 CLDN4O14493 209 aa8.79□□□□□ -1
VPS52-216ENST00000471309 DSCR3O14972 297 aa8.79□□□□□ -1
VPS52-216ENST00000471309 CASC3O15234 703 aaKnown RBP8.79□□□□□ -1
VPS52-216ENST00000471309 FLRT2O43155 660 aa8.79□□□□□ -1
VPS52-216ENST00000471309 RASAL1O95294 804 aa8.79□□□□□ -1
VPS52-216ENST00000471309 AGR2O95994 175 aa8.79□□□□□ -1
VPS52-216ENST00000471309 FABP3P05413 133 aa8.79□□□□□ -1
VPS52-216ENST00000471309 GP1BAP07359 652 aa8.79□□□□□ -1
VPS52-216ENST00000471309 OR12D1P0DN82 309 aa8.79□□□□□ -1
VPS52-216ENST00000471309 SOX18P35713 384 aa8.79□□□□□ -1
VPS52-216ENST00000471309 XCR1P46094 333 aa8.79□□□□□ -1
VPS52-216ENST00000471309 MAN2A2P49641 1150 aa8.79□□□□□ -1
VPS52-216ENST00000471309 CRISP3P54108 245 aa8.79□□□□□ -1
VPS52-216ENST00000471309 PRKAG1P54619 331 aa8.79□□□□□ -1
VPS52-216ENST00000471309 MRPS35P82673 323 aaKnown RBP8.79□□□□□ -1
VPS52-216ENST00000471309 MAT1AQ00266 395 aaKnown RBP8.79□□□□□ -1
VPS52-216ENST00000471309 ID2Q02363 134 aa8.79□□□□□ -1
VPS52-216ENST00000471309 MGAT2Q10469 447 aa8.79□□□□□ -1
VPS52-216ENST00000471309 SLC13A2Q13183 592 aa8.79□□□□□ -1
VPS52-216ENST00000471309 DSG2Q14126 1118 aa8.79□□□□□ -1
VPS52-216ENST00000471309 MAPK11Q15759 364 aa8.79□□□□□ -1
VPS52-216ENST00000471309 PRICKLE4Q2TBC4 344 aa8.79□□□□□ -1
VPS52-216ENST00000471309 EXOSC6Q5RKV6 272 aaKnown RBP8.79□□□□□ -1
VPS52-216ENST00000471309 PPP4R4Q6NUP7 873 aa8.79□□□□□ -1
VPS52-216ENST00000471309 CDC73Q6P1J9 531 aa8.79□□□□□ -1
VPS52-216ENST00000471309 DBX2Q6ZNG2 339 aa8.79□□□□□ -1
VPS52-216ENST00000471309 TTLL10Q6ZVT0 673 aa8.79□□□□□ -1
VPS52-216ENST00000471309 VTCN1Q7Z7D3 282 aa8.79□□□□□ -1
VPS52-216ENST00000471309 ZDHHC21Q8IVQ6 265 aa8.79□□□□□ -1
VPS52-216ENST00000471309 ST13P4Q8IZP2 240 aaPredicted RBP8.79□□□□□ -1
VPS52-216ENST00000471309 METTL27Q8N6F8 245 aaPredicted RBP8.79□□□□□ -1
VPS52-216ENST00000471309 OR5D16Q8NGK9 328 aa8.79□□□□□ -1
VPS52-216ENST00000471309 OR51Q1Q8NH59 317 aa8.79□□□□□ -1
VPS52-216ENST00000471309 RASSF5Q8WWW0 418 aa8.79□□□□□ -1
VPS52-216ENST00000471309 COL26A1Q96A83 441 aa8.79□□□□□ -1
VPS52-216ENST00000471309 CTHRC1Q96CG8 243 aa8.79□□□□□ -1
VPS52-216ENST00000471309 NAF1Q96HR8 494 aaKnown RBP8.79□□□□□ -1
VPS52-216ENST00000471309 VPS50Q96JG6 964 aa8.79□□□□□ -1
VPS52-216ENST00000471309 MAGED4Q96JG8 741 aa8.79□□□□□ -1
VPS52-216ENST00000471309 CCDC74BQ96LY2 380 aa8.79□□□□□ -1
VPS52-216ENST00000471309 ZNF570Q96NI8 536 aa8.79□□□□□ -1
VPS52-216ENST00000471309 OR1F2PQ96R84 312 aa8.79□□□□□ -1
VPS52-216ENST00000471309 OR7D2Q96RA2 312 aa8.79□□□□□ -1
VPS52-216ENST00000471309 GFM1Q96RP9 751 aaKnown RBP8.79□□□□□ -1
VPS52-216ENST00000471309 PELOQ9BRX2 385 aaKnown RBP8.79□□□□□ -1
VPS52-216ENST00000471309 ACTRT3Q9BYD9 372 aa8.79□□□□□ -1
VPS52-216ENST00000471309 RBCK1Q9BYM8 510 aa8.79□□□□□ -1
VPS52-216ENST00000471309 SMOC1Q9H4F8 434 aa8.79□□□□□ -1
VPS52-216ENST00000471309 COQ10BQ9H8M1 238 aa8.79□□□□□ -1
VPS52-216ENST00000471309 NTN4Q9HB63 628 aa8.79□□□□□ -1
VPS52-216ENST00000471309 BCL2L10Q9HD36 194 aa8.79□□□□□ -1
VPS52-216ENST00000471309 PRTFDC1Q9NRG1 225 aa8.79□□□□□ -1
VPS52-216ENST00000471309 SIDT1Q9NXL6 827 aaKnown RBP8.79□□□□□ -1
VPS52-216ENST00000471309 MAT2BQ9NZL9 334 aa8.79□□□□□ -1
VPS52-216ENST00000471309 TRPC4Q9UBN4 977 aa8.79□□□□□ -1
VPS52-216ENST00000471309 OAZ3Q9UMX2 235 aa8.79□□□□□ -1
VPS52-216ENST00000471309 SRPK3Q9UPE1 567 aa8.79□□□□□ -1
VPS52-216ENST00000471309 LIPT1Q9Y234 373 aa8.79□□□□□ -1
VPS52-216ENST00000471309 PADI2Q9Y2J8 665 aa8.79□□□□□ -1
VPS52-216ENST00000471309 TMEM184BQ9Y519 407 aaPredicted RBP8.79□□□□□ -1
VPS52-216ENST00000471309 R4GN57 208 aa8.79□□□□□ -1
VPS52-216ENST00000471309 PI4KAP42356 2102 aa8.78□□□□□ -1
VPS52-216ENST00000471309 SCN3AQ9NY46 2000 aa8.78□□□□□ -1
VPS52-216ENST00000471309 LNP1A1A4G5 178 aa8.78□□□□□ -1
VPS52-216ENST00000471309 PRAMEF27A3QJZ7 478 aa8.78□□□□□ -1
VPS52-216ENST00000471309 TGFBR3LH3BV60 316 aa8.78□□□□□ -1
VPS52-216ENST00000471309 M0QX08 132 aa8.78□□□□□ -1
VPS52-216ENST00000471309 NTN3O00634 580 aaPredicted RBP8.78□□□□□ -1
VPS52-216ENST00000471309 SOCS2O14508 198 aa8.78□□□□□ -1
VPS52-216ENST00000471309 ACOX3O15254 700 aa8.78□□□□□ -1
VPS52-216ENST00000471309 SLC28A2O43868 658 aa8.78□□□□□ -1
VPS52-216ENST00000471309 OR10H2O60403 315 aa8.78□□□□□ -1
VPS52-216ENST00000471309 DPM1O60762 260 aa8.78□□□□□ -1
VPS52-216ENST00000471309 COQ9O75208 318 aa8.78□□□□□ -1
VPS52-216ENST00000471309 PGM3O95394 542 aa8.78□□□□□ -1
VPS52-216ENST00000471309 HPRP00739 348 aa8.78□□□□□ -1
VPS52-216ENST00000471309 CST1P01037 141 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms