RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 GABPB1Q06547 395 aaPredicted RBP3.4□□□□□ -1.87
PRPF3-204ENST00000470824 SPP2Q13103 211 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 KLF5Q13887 457 aaPredicted RBP3.4□□□□□ -1.87
PRPF3-204ENST00000470824 PDIA5Q14554 519 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 CEBPEQ15744 281 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 CLPPQ16740 277 aaPredicted RBP3.4□□□□□ -1.87
PRPF3-204ENST00000470824 KNOP1Q1ED39 458 aaKnown RBP3.4□□□□□ -1.87
PRPF3-204ENST00000470824 SHROOM1Q2M3G4 852 aaPredicted RBP3.4□□□□□ -1.87
PRPF3-204ENST00000470824 MS4A18Q3C1V0 323 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 AGKQ53H12 422 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 HSP90AA5PQ58FG0 334 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 GDPGP1Q6ZNW5 385 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 SYVN1Q86TM6 617 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 MLKLQ8NB16 471 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 C11orf45Q8TAV5 145 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 FBXO25Q8TCJ0 367 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 DQX1Q8TE96 717 aaKnown RBP3.4□□□□□ -1.87
PRPF3-204ENST00000470824 C11orf52Q96A22 123 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 ANKRD27Q96NW4 1050 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 DEFB118Q96PH6 123 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 TNFRSF13CQ96RJ3 184 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 OPRPNQ99935 248 aaPredicted RBP3.4□□□□□ -1.87
PRPF3-204ENST00000470824 FAM124BQ9H5Z6 455 aaPredicted RBP3.4□□□□□ -1.87
PRPF3-204ENST00000470824 SLC25A19Q9HC21 320 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 IL20RAQ9UHF4 553 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 BCAP29Q9UHQ4 241 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 AURKCQ9UQB9 309 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 NIP7Q9Y221 180 aaKnown RBP eCLIP3.4□□□□□ -1.87
PRPF3-204ENST00000470824 RNF17Q9BXT8 1623 aaKnown RBP3.4□□□□□ -1.87
PRPF3-204ENST00000470824 ATP8B3O60423 1300 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 ZMYM6O95789 1325 aa3.4□□□□□ -1.87
PRPF3-204ENST00000470824 ADGBQ8N7X0 1667 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 SYNMO15061 1565 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 SAMD9LQ8IVG5 1584 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 NEURL4Q96JN8 1562 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 INO80Q9ULG1 1556 aaPredicted RBP3.39□□□□□ -1.87
PRPF3-204ENST00000470824 PLCH2O75038 1416 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 PTPRUQ92729 1446 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 STRCP1A6NGW2 1772 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 LOC390937A0A1W2PQ73 354 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 FBP2O00757 339 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 ZG16O60844 167 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 AKR7A3O95154 331 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 GSTA1P08263 222 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 GP9P14770 177 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 SELEP16581 610 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 FUT1P19526 365 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 UGT1A4P22310 534 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 MATKP42679 507 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 NPY2RP49146 381 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 TKTL1P51854 596 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 RPS4XP62701 263 aaKnown RBP3.39□□□□□ -1.87
PRPF3-204ENST00000470824 RPS27AP62979 156 aaKnown RBP3.39□□□□□ -1.87
PRPF3-204ENST00000470824 CALCOCO2Q13137 446 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 FASTKQ14296 549 aaKnown RBP3.39□□□□□ -1.87
PRPF3-204ENST00000470824 HAGHQ16775 308 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 DNAJC21Q5F1R6 531 aaKnown RBP3.39□□□□□ -1.87
PRPF3-204ENST00000470824 LDLRAP1Q5SW96 308 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 TEX35Q5T0J7 233 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 ADAM5Q6NVV9 412 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 STEAP1BQ6NZ63 245 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 MCM10Q7L590 875 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 GPR142Q7Z601 462 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 KCNMB4Q86W47 210 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 WDSUB1Q8N9V3 476 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 GTF3AQ92664 365 aaKnown RBP3.39□□□□□ -1.87
PRPF3-204ENST00000470824 POM121L2Q96KW2 1035 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 CAPNS2Q96L46 248 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 ACCSQ96QU6 501 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 STRADBQ9C0K7 418 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 PARLQ9H300 379 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 THYN1Q9P016 225 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 TUBGCP4Q9UGJ1 667 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 SLC6A5Q9Y345 797 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 DNMT1P26358 1616 aaKnown RBP3.39□□□□□ -1.87
PRPF3-204ENST00000470824 CNTNAP2Q9UHC6 1331 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 SYCP2Q9BX26 1530 aa3.39□□□□□ -1.87
PRPF3-204ENST00000470824 PLXNC1O60486 1568 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 IGHV4-30-2A0A087WSY4 118 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 MEX3AA1L020 520 aaKnown RBP3.38□□□□□ -1.87
PRPF3-204ENST00000470824 IGLON5A6NGN9 336 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 CFLARO15519 480 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 ZNF749O43361 778 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 BUB1O43683 1085 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 IDH3BO43837 385 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 RNF224P0DH78 156 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 HPDP32754 393 aaPredicted RBP3.38□□□□□ -1.87
PRPF3-204ENST00000470824 SLC1A6P48664 564 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 MTTPP55157 894 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 SRPXP78539 464 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 FKBP3Q00688 224 aaKnown RBP3.38□□□□□ -1.87
PRPF3-204ENST00000470824 SCGB2A2Q13296 93 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 ZNF146Q15072 292 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 HKDC1Q2TB90 917 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 LIPKQ5VXJ0 399 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 RHBDD2Q6NTF9 364 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 BANPQ8N9N5 519 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 AQP11Q8NBQ7 271 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 MINDY2Q8NBR6 621 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 RELL2Q8NC24 303 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms