RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 CADM1Q9BY67 442 aaKnown RBP6.25□□□□□ -1.41
VAMP3-202ENST00000470357 STRADBQ9C0K7 418 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 MUC13Q9H3R2 512 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 RAD21L1Q9H4I0 556 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 SYNDIG1Q9H7V2 258 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 LHX9Q9NQ69 397 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 FGF21Q9NSA1 209 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 ACSS1Q9NUB1 689 aaPredicted RBP6.25□□□□□ -1.41
VAMP3-202ENST00000470357 ZNF282Q9UDV7 671 aaPredicted RBP6.25□□□□□ -1.41
VAMP3-202ENST00000470357 DAPP1Q9UN19 280 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 VPS4AQ9UN37 437 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 ENTPD4Q9Y227 616 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 BTBD3Q9Y2F9 522 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 L3MBTL1Q9Y468 752 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 ASB4Q9Y574 426 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 PCDHB14Q9Y5E9 798 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 PCDHGB7Q9Y5F8 929 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 PCDHA9Q9Y5H5 950 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 ZNF780BQ9Y6R6 833 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 NUP210LQ5VU65 1888 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 PTPN13Q12923 2485 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 PIEZO2Q9H5I5 2752 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 BSNQ9UPA5 3926 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 A0A0G2JN53 185 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 IGHV5-10-1A0A0J9YXX1 117 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 A0A1W2PRB8 838 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 CLDN4O14493 209 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 NVLO15381 856 aaKnown RBP6.24□□□□□ -1.41
VAMP3-202ENST00000470357 PDPK1O15530 556 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 PROM1O43490 865 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 TLX3O43711 291 aaPredicted RBP6.24□□□□□ -1.41
VAMP3-202ENST00000470357 PRAMEF10O60809 474 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 RFPL3O75679 317 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 GBAP04062 536 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 LAMP1P11279 417 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 PIM1P11309 404 aaPredicted RBP6.24□□□□□ -1.41
VAMP3-202ENST00000470357 MYF5P13349 255 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 CSNK2A2P19784 350 aaPredicted RBP6.24□□□□□ -1.41
VAMP3-202ENST00000470357 ME2P23368 584 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 CCKBRP32239 447 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 MPIP34949 423 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 EIF2S3P41091 472 aaKnown RBP6.24□□□□□ -1.41
VAMP3-202ENST00000470357 ALDH9A1P49189 494 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 SEPHS1P49903 392 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 ANXA11P50995 505 aaKnown RBP6.24□□□□□ -1.41
VAMP3-202ENST00000470357 MAPK10P53779 464 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 LIM2P55344 173 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 RAB38P57729 211 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 EEFSECP57772 596 aaKnown RBP6.24□□□□□ -1.41
VAMP3-202ENST00000470357 TXNL4AP83876 142 aaKnown RBP6.24□□□□□ -1.41
VAMP3-202ENST00000470357 SLC25A3Q00325 362 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 CFHR1Q03591 330 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 BNIP2Q12982 314 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 DEFB110Q30KQ9 67 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 GLIPR1L2Q4G1C9 344 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 PHF19Q5T6S3 580 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 OR4F3Q6IEY1 312 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 C8orf82Q6P1X6 216 aaPredicted RBP6.24□□□□□ -1.41
VAMP3-202ENST00000470357 BHLHB9Q6PI77 547 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 SLC2A7Q6PXP3 512 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 ZNF793Q6ZN11 406 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 LURAP1LQ8IV03 231 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 SLITRK4Q8IW52 837 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 FBXW8Q8N3Y1 598 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 MFSD4AQ8N468 514 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 ARHGEF39Q8N4T4 335 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 GOT1L1Q8NHS2 421 aaPredicted RBP6.24□□□□□ -1.41
VAMP3-202ENST00000470357 OR5P2Q8WZ92 322 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 GTF2H4Q92759 462 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 TANKQ92844 425 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 NKD1Q969G9 470 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 MOAP1Q96BY2 351 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 ZNF501Q96CX3 271 aaPredicted RBP6.24□□□□□ -1.41
VAMP3-202ENST00000470357 EAF1Q96JC9 268 aaPredicted RBP6.24□□□□□ -1.41
VAMP3-202ENST00000470357 CCDC74BQ96LY2 380 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 ANKRD27Q96NW4 1050 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 OR1F2PQ96R84 312 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 BBS4Q96RK4 519 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 CDRT15Q96T59 188 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 CGREF1Q99674 301 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 MACROD1Q9BQ69 325 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 GPATCH1Q9BRR8 931 aaKnown RBP6.24□□□□□ -1.41
VAMP3-202ENST00000470357 PELOQ9BRX2 385 aaKnown RBP6.24□□□□□ -1.41
VAMP3-202ENST00000470357 SPATA9Q9BWV2 254 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 SORBS1Q9BX66 1292 aaKnown RBP6.24□□□□□ -1.41
VAMP3-202ENST00000470357 SLC7A5P2Q9GIP4 190 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 AICDAQ9GZX7 198 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 RPF2Q9H7B2 306 aaKnown RBP6.24□□□□□ -1.41
VAMP3-202ENST00000470357 SLC35C2Q9NQQ7 365 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 SEMA3GQ9NS98 782 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 CUTCQ9NTM9 273 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 TEX10Q9NXF1 929 aaPredicted RBP6.24□□□□□ -1.41
VAMP3-202ENST00000470357 TAS2R9Q9NYW1 312 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 ADA2Q9NZK5 511 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 ABCD2Q9UBJ2 740 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.24□□□□□ -1.41
VAMP3-202ENST00000470357 UTS2RQ9UKP6 389 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 FBXW2Q9UKT8 454 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 RARRES3Q9UL19 164 aa6.24□□□□□ -1.41
VAMP3-202ENST00000470357 CLCA2Q9UQC9 943 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms