RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 OR2B6P58173 313 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 GAB4Q2WGN9 574 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 PLPP4Q5VZY2 271 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 KIAA1161Q6NSJ0 714 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 TMEM64Q6YI46 380 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 NRARPQ7Z6K4 114 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 LAX1Q8IWV1 398 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 CELF5Q8N6W0 485 aaKnown RBP12.89□□□□□ -0.35
BRCA1-209ENST00000470026 AMER3Q8N944 861 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 OR4K5Q8NGD3 323 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 CREB3L4Q8TEY5 395 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 UCN3Q969E3 161 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 TP53INP1Q96A56 240 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 ZNF582Q96NG8 517 aaPredicted RBP12.89□□□□□ -0.35
BRCA1-209ENST00000470026 AMDHD1Q96NU7 426 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 MED18Q9BUE0 208 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 AICDAQ9GZX7 198 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 TVP23BQ9NYZ1 205 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.89□□□□□ -0.35
BRCA1-209ENST00000470026 PRKAB1Q9Y478 270 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 FEZF1A0PJY2 475 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 A8MU76 341 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 H7BY64 318 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 M0R3H8 397 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 WWP2O00308 870 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 MYL12BO14950 172 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 TLX2O43763 284 aaPredicted RBP12.89□□□□□ -0.35
BRCA1-209ENST00000470026 CLEC3AO75596 197 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 ADH1CP00326 375 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 TNNI3P19429 210 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 PSMB5P28074 263 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 CSNK1G2P78368 415 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 FUT5Q11128 374 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 BAK1Q16611 211 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 CCDC92Q53HC0 331 aaPredicted RBP12.89□□□□□ -0.35
BRCA1-209ENST00000470026 ACSM5Q6NUN0 579 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 PRR23CQ6ZRP0 262 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 LRRTM4Q86VH4 590 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 IQCF1Q8N6M8 205 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 OR9Q1Q8NGQ5 310 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 PRRC1Q96M27 445 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 PRAP1Q96NZ9 151 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 GPA33Q99795 319 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 TMEM245Q9H330 911 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 NEK6Q9HC98 313 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 SNTG1Q9NSN8 517 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 TXNL4BQ9NX01 149 aaKnown RBP12.89□□□□□ -0.35
BRCA1-209ENST00000470026 SF3B6Q9Y3B4 125 aaKnown RBP12.89□□□□□ -0.35
BRCA1-209ENST00000470026 CMAHPQ9Y471 501 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 CCNKO75909 580 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 MSL3P1P0C860 447 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 TRAPPC2P0DI81 140 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 TRAPPC2BP0DI82 140 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 ACRP10323 421 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 ETV5P41161 510 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 NR4A2P43354 598 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 ETV1P50549 477 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 GINS1Q14691 196 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 SF3B4Q15427 424 aaKnown RBP eCLIP12.88□□□□□ -0.35
BRCA1-209ENST00000470026 NDUFA5Q16718 116 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 DUSP6Q16828 381 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 FNDC3BQ53EP0 1204 aaKnown RBP12.88□□□□□ -0.35
BRCA1-209ENST00000470026 PRAMEF8Q5VWM4 474 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 PRAMEF7Q5VXH5 474 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 LIPKQ5VXJ0 399 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 OR4C11Q6IEV9 310 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 CACTIN-AS1Q8N1I8 211 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 LINC01555Q8NAE3 123 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 OR5D16Q8NGK9 328 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 RSPRY1Q96DX4 576 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 SPATA5L1Q9BVQ7 753 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 FNDC11Q9BVV2 318 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 HDAC8Q9BY41 377 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 MIXL1Q9H2W2 232 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 SLC35C2Q9NQQ7 365 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 PLEKHB1Q9UF11 243 aaPredicted RBP12.88□□□□□ -0.35
BRCA1-209ENST00000470026 FBXW2Q9UKT8 454 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 SLC9A8Q9Y2E8 581 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 TMEM129A0AVI4 362 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 PLD2O14939 933 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 CASC3O15234 703 aaKnown RBP12.88□□□□□ -0.35
BRCA1-209ENST00000470026 SH3BP5O60239 455 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 LCMT2O60294 686 aaKnown RBP12.88□□□□□ -0.35
BRCA1-209ENST00000470026 EPHX1P07099 455 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 NR2F1P10589 423 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 IL7P13232 177 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 GSTM3P21266 225 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 PPP2R1BP30154 601 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 KHKP50053 298 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 UBE3AQ05086 875 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 TPBGQ13641 420 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 ZIC1Q15915 447 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 ZMAT1Q5H9K5 638 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 NXNL2Q5VZ03 156 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 GRASPQ7Z6J2 395 aaPredicted RBP12.88□□□□□ -0.35
BRCA1-209ENST00000470026 OR8H2Q8N162 312 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 OR6T1Q8NGN1 323 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 SFXN5Q8TD22 340 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 CXorf40AQ8TE69 158 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 XAGE5Q8WWM1 108 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms