RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 MYRIPQ8NFW9 859 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 TNIP2Q8NFZ5 429 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 UHMK1Q8TAS1 419 aaKnown RBP12.17□□□□□ -0.46
CPSF4-210ENST00000469897 SLC44A1Q8WWI5 657 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 IFT81Q8WYA0 676 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 RILPQ96NA2 401 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 CDC42EP4Q9H3Q1 356 aaKnown RBP12.17□□□□□ -0.46
CPSF4-210ENST00000469897 ELOVL6Q9H5J4 265 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 SLC24A3Q9HC58 644 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 CES1P1Q9UKY3 287 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 SLC6A5Q9Y345 797 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 L3MBTL1Q9Y468 752 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 PCDHGB3Q9Y5G1 929 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 TACC2O95359 2948 aa12.17□□□□□ -0.46
CPSF4-210ENST00000469897 C2orf72A6NCS6 295 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 HSPB2A8KAH6 182 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 POC1B-GALNT4F8VUJ3 575 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 STX16-NPEPL1H3BU86 382 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 STX16O14662 325 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 ERAL1O75616 437 aaKnown RBP12.16□□□□□ -0.46
CPSF4-210ENST00000469897 URI1O94763 535 aaPredicted RBP12.16□□□□□ -0.46
CPSF4-210ENST00000469897 EPPINO95925 133 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 PDYNP01213 254 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 ABCB1P08183 1280 aaPredicted RBP12.16□□□□□ -0.46
CPSF4-210ENST00000469897 DNAJA1P31689 397 aaKnown RBP12.16□□□□□ -0.46
CPSF4-210ENST00000469897 UQCRC1P31930 480 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 DEKP35659 375 aaKnown RBP12.16□□□□□ -0.46
CPSF4-210ENST00000469897 KIR2DL3P43628 341 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 ART1P52961 327 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 MAPK12P53778 367 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 NRG3P56975 720 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 RIPPLY3P57055 190 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 CKAP4Q07065 602 aaKnown RBP12.16□□□□□ -0.46
CPSF4-210ENST00000469897 MGAT2Q10469 447 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 TRAF3Q13114 568 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 TOMM20Q15388 145 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 HSPB2Q16082 182 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 EIPR1Q53HC9 387 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 FNDC7Q5VTL7 733 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 DESI1Q6ICB0 168 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 FAM180BQ6P0A1 224 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 PAGE2Q7Z2X7 111 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 RELL1Q8IUW5 271 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 NAXEQ8NCW5 288 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 SIMC1Q8NDZ2 872 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 OR7G1Q8NGA0 311 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 TRPC4APQ8TEL6 797 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 TM4SF18Q96CE8 201 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 ZNF597Q96LX8 424 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 SECISBP2Q96T21 854 aaKnown RBP12.16□□□□□ -0.46
CPSF4-210ENST00000469897 FUT8Q9BYC5 575 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 BRINP2Q9C0B6 783 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 NXF5Q9H1B4 397 aaKnown RBP12.16□□□□□ -0.46
CPSF4-210ENST00000469897 EPB41L4BQ9H329 900 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 RYDENQ9NUL5 291 aaKnown RBP12.16□□□□□ -0.46
CPSF4-210ENST00000469897 DNAJB12Q9NXW2 375 aaKnown RBP12.16□□□□□ -0.46
CPSF4-210ENST00000469897 XPR1Q9UBH6 696 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 MTRF1LQ9UGC7 380 aaKnown RBP12.16□□□□□ -0.46
CPSF4-210ENST00000469897 BCAP29Q9UHQ4 241 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 DMGDHQ9UI17 866 aaKnown RBP12.16□□□□□ -0.46
CPSF4-210ENST00000469897 ADAM29Q9UKF5 820 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 SLC12A4Q9UP95 1085 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 DTX4Q9Y2E6 619 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 PCDHA9Q9Y5H5 950 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 IKBKGQ9Y6K9 419 aa12.16□□□□□ -0.46
CPSF4-210ENST00000469897 C1orf226A1L170 272 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 GNB5O14775 395 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 GUCY1B2O75343 617 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 CTAG2O75638 210 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 KRT38O76015 456 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 HPNP05981 417 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 SBK3P0C264 359 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 COL6A2P12110 1019 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 BMP5P22003 454 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 ABCD3P28288 659 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 MAGEA12P43365 314 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 MASP1P48740 699 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 CDK9P50750 372 aaKnown RBP12.15□□□□□ -0.46
CPSF4-210ENST00000469897 AGFG1P52594 562 aaKnown RBP12.15□□□□□ -0.46
CPSF4-210ENST00000469897 IST1P53990 364 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 CRYZQ08257 329 aaKnown RBP12.15□□□□□ -0.46
CPSF4-210ENST00000469897 GALNT1Q10472 559 aaPredicted RBP12.15□□□□□ -0.46
CPSF4-210ENST00000469897 MAP4K2Q12851 820 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 EXOSC7Q15024 291 aaKnown RBP12.15□□□□□ -0.46
CPSF4-210ENST00000469897 NNATQ16517 81 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 TSNAXIP1Q2TAA8 658 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 PRICKLE4Q2TBC4 344 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 ACSF3Q4G176 576 aaPredicted RBP12.15□□□□□ -0.46
CPSF4-210ENST00000469897 WIPI1Q5MNZ9 446 aaPredicted RBP12.15□□□□□ -0.46
CPSF4-210ENST00000469897 TEX35Q5T0J7 233 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 C6orf163Q5TEZ5 329 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 VASNQ6EMK4 673 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 SLC48A1Q6P1K1 146 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 COMMD6Q7Z4G1 85 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 TMEM151AQ8N4L1 468 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 ADCY4Q8NFM4 1077 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 SELENOMQ8WWX9 145 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 ISL2Q96A47 359 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 PAFAH2Q99487 392 aa12.15□□□□□ -0.46
CPSF4-210ENST00000469897 MRPL57Q9BQC6 102 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms