RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 MAPKAPK3Q16644 382 aa16.52■□□□□ 0.23
MRPL28-208ENST00000469744 RABL3Q5HYI8 236 aa16.52■□□□□ 0.23
MRPL28-208ENST00000469744 MFSD4BQ5TF39 518 aa16.52■□□□□ 0.23
MRPL28-208ENST00000469744 ZADH2Q8N4Q0 377 aa16.52■□□□□ 0.23
MRPL28-208ENST00000469744 MARVELD2Q8N4S9 558 aa16.52■□□□□ 0.23
MRPL28-208ENST00000469744 CAMKVQ8NCB2 501 aa16.52■□□□□ 0.23
MRPL28-208ENST00000469744 WDR20Q8TBZ3 569 aa16.52■□□□□ 0.23
MRPL28-208ENST00000469744 GTF2H4Q92759 462 aa16.52■□□□□ 0.23
MRPL28-208ENST00000469744 POP5Q969H6 163 aaKnown RBP16.52■□□□□ 0.23
MRPL28-208ENST00000469744 TM4SF19Q96DZ7 209 aa16.52■□□□□ 0.23
MRPL28-208ENST00000469744 WDR34Q96EX3 536 aa16.52■□□□□ 0.23
MRPL28-208ENST00000469744 TGIF2Q9GZN2 237 aa16.52■□□□□ 0.23
MRPL28-208ENST00000469744 LHPPQ9H008 270 aa16.52■□□□□ 0.23
MRPL28-208ENST00000469744 NSG1A0A0A6YYJ2 146 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 OR2W5A6NFC9 320 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 NDUFS4O43181 175 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 RDH16O75452 317 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 BMP10O95393 424 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 NSA2O95478 260 aaKnown RBP16.51■□□□□ 0.23
MRPL28-208ENST00000469744 CELA2AP08217 269 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 SLC35G6P0C7Q6 338 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 DGKQP52824 942 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 FOLH1Q04609 750 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 SRSF1Q07955 248 aaKnown RBP eCLIP16.51■□□□□ 0.23
MRPL28-208ENST00000469744 PTGR1Q14914 329 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 DPY19L1Q2PZI1 675 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 AGAP7PQ5VUJ5 663 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 IGFL3Q6UXB1 125 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 LINC00696Q6ZRV3 163 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 ADGRG5Q8IZF4 528 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 PACRGLQ8N7B6 248 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 TRPV3Q8NET8 790 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 OR4K1Q8NGD4 311 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 OR51Q1Q8NH59 317 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 CANT1Q8WVQ1 401 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 SLC5A11Q8WWX8 675 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 VPS50Q96JG6 964 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 CCDC115Q96NT0 180 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 AGAP4Q96P64 663 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 RBCK1Q9BYM8 510 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 ANKHQ9HCJ1 492 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 SLAMF8Q9P0V8 285 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 GMPR2Q9P2T1 348 aaKnown RBP16.51■□□□□ 0.23
MRPL28-208ENST00000469744 VPS4AQ9UN37 437 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 PCDHGA11Q9Y5H2 935 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 ESPL1Q14674 2120 aa16.51■□□□□ 0.23
MRPL28-208ENST00000469744 IGHV1-45A0A0A0MS14 117 aa16.5■□□□□ 0.23
MRPL28-208ENST00000469744 TCRBV5S2A0A599 114 aa16.5■□□□□ 0.23
MRPL28-208ENST00000469744 H0YIG0 161 aa16.5■□□□□ 0.23
MRPL28-208ENST00000469744 KLHL18O94889 574 aa16.5■□□□□ 0.23
MRPL28-208ENST00000469744 B3GALT4O96024 378 aa16.5■□□□□ 0.23
MRPL28-208ENST00000469744 ZNF26P17031 533 aaPredicted RBP16.5■□□□□ 0.23
MRPL28-208ENST00000469744 CXCR2P25025 360 aa16.5■□□□□ 0.23
MRPL28-208ENST00000469744 XCR1P46094 333 aa16.5■□□□□ 0.23
MRPL28-208ENST00000469744 DOC2AQ14183 400 aa16.5■□□□□ 0.23
MRPL28-208ENST00000469744 FAM174BQ3ZCQ3 159 aa16.5■□□□□ 0.23
MRPL28-208ENST00000469744 MINDY4Q4G0A6 757 aa16.5■□□□□ 0.23
MRPL28-208ENST00000469744 XKR6Q5GH73 641 aa16.5■□□□□ 0.23
MRPL28-208ENST00000469744 LRIF1Q5T3J3 769 aa16.5■□□□□ 0.23
MRPL28-208ENST00000469744 TMEM154Q6P9G4 183 aa16.5■□□□□ 0.23
MRPL28-208ENST00000469744 NDUFAF7Q7L592 441 aa16.5■□□□□ 0.23
MRPL28-208ENST00000469744 TMPRSS11BQ86T26 416 aa16.5■□□□□ 0.23
MRPL28-208ENST00000469744 SPPL2CQ8IUH8 684 aa16.5■□□□□ 0.23
MRPL28-208ENST00000469744 CISD2Q8N5K1 135 aaKnown RBP16.5■□□□□ 0.23
MRPL28-208ENST00000469744 OR52E4Q8NGH9 312 aa16.5■□□□□ 0.23
MRPL28-208ENST00000469744 LRTOMTQ8WZ04 291 aa16.5■□□□□ 0.23
MRPL28-208ENST00000469744 TM9SF4Q92544 642 aa16.5■□□□□ 0.23
MRPL28-208ENST00000469744 MTFMTQ96DP5 389 aaKnown RBP16.5■□□□□ 0.23
MRPL28-208ENST00000469744 VN1R1Q9GZP7 353 aa16.5■□□□□ 0.23
MRPL28-208ENST00000469744 RMND5AQ9H871 391 aa16.5■□□□□ 0.23
MRPL28-208ENST00000469744 EGFL7Q9UHF1 273 aa16.5■□□□□ 0.23
MRPL28-208ENST00000469744 NAALAD2Q9Y3Q0 740 aa16.5■□□□□ 0.23
MRPL28-208ENST00000469744 DYRK1BQ9Y463 629 aa16.5■□□□□ 0.23
MRPL28-208ENST00000469744 KCNE2Q9Y6J6 123 aa16.5■□□□□ 0.23
MRPL28-208ENST00000469744 SPTAN1Q13813 2472 aaKnown RBP16.5■□□□□ 0.23
MRPL28-208ENST00000469744 USP9YO00507 2555 aaPredicted RBP16.5■□□□□ 0.23
MRPL28-208ENST00000469744 A0A096LPI6 279 aa16.49■□□□□ 0.23
MRPL28-208ENST00000469744 TRBV5-3A0A0A0MS03 114 aa16.49■□□□□ 0.23
MRPL28-208ENST00000469744 IGHV3-20A0A0C4DH32 117 aa16.49■□□□□ 0.23
MRPL28-208ENST00000469744 TRBC2A0A5B9 178 aa16.49■□□□□ 0.23
MRPL28-208ENST00000469744 LYNP07948 512 aa16.49■□□□□ 0.23
MRPL28-208ENST00000469744 SDC1P18827 310 aa16.49■□□□□ 0.23
MRPL28-208ENST00000469744 S100A3P33764 101 aa16.49■□□□□ 0.23
MRPL28-208ENST00000469744 RUNDC3AQ59EK9 446 aa16.49■□□□□ 0.23
MRPL28-208ENST00000469744 SPANXN4Q5MJ08 99 aa16.49■□□□□ 0.23
MRPL28-208ENST00000469744 TBCELQ5QJ74 424 aa16.49■□□□□ 0.23
MRPL28-208ENST00000469744 NOXRED1Q6NXP6 359 aa16.49■□□□□ 0.23
MRPL28-208ENST00000469744 LANCL3Q6ZV70 420 aa16.49■□□□□ 0.23
MRPL28-208ENST00000469744 RIMKLAQ8IXN7 391 aa16.49■□□□□ 0.23
MRPL28-208ENST00000469744 SIRT6Q8N6T7 355 aa16.49■□□□□ 0.23
MRPL28-208ENST00000469744 GALNT11Q8NCW6 608 aa16.49■□□□□ 0.23
MRPL28-208ENST00000469744 OR5T3Q8NGG3 340 aa16.49■□□□□ 0.23
MRPL28-208ENST00000469744 EME1Q96AY2 570 aa16.49■□□□□ 0.23
MRPL28-208ENST00000469744 REPS1Q96D71 796 aa16.49■□□□□ 0.23
MRPL28-208ENST00000469744 SNRNP40Q96DI7 357 aaKnown RBP16.49■□□□□ 0.23
MRPL28-208ENST00000469744 ITCHQ96J02 903 aa16.49■□□□□ 0.23
MRPL28-208ENST00000469744 OR52E6Q96RD3 313 aa16.49■□□□□ 0.23
MRPL28-208ENST00000469744 EHD1Q9H4M9 534 aa16.49■□□□□ 0.23
MRPL28-208ENST00000469744 YY1AP1Q9H869 796 aa16.49■□□□□ 0.23
MRPL28-208ENST00000469744 ASF1BQ9NVP2 202 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms