RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 PRSS53Q2L4Q9 553 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 LRRC73Q5JTD7 316 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 FAM27D1Q5T7N8 215 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 CPTPQ5TA50 214 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 RAET1GQ6H3X3 334 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 HSDL2Q6YN16 418 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 ZNF782Q6ZMW2 699 aaPredicted RBP7.54□□□□□ -1.2
TPM3-215ENST00000469717 UBE2R2Q712K3 238 aaPredicted RBP7.54□□□□□ -1.2
TPM3-215ENST00000469717 GPAT4Q86UL3 456 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 MON1AQ86VX9 555 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 CACUL1Q86Y37 369 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 HJURPQ8NCD3 748 aaPredicted RBP7.54□□□□□ -1.2
TPM3-215ENST00000469717 PROKR2Q8NFJ6 384 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 OR6M1Q8NGM8 313 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 MRPS31Q92665 395 aaKnown RBP7.54□□□□□ -1.2
TPM3-215ENST00000469717 MARVELD3Q96A59 401 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 WBP1Q96G27 269 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 ART5Q96L15 291 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 RNF32Q9H0A6 362 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 PIGUQ9H490 435 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 MVB12BQ9H7P6 319 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 IL26Q9NPH9 171 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 TMEM161AQ9NX61 479 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 ING4Q9UNL4 249 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 KCNMB2Q9Y691 235 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 GNG14A0A1W2PPG7 69 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 DRGXA6NNA5 263 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 ZNF7P17097 686 aaPredicted RBP7.54□□□□□ -1.2
TPM3-215ENST00000469717 DRD5P21918 477 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 XKP51811 444 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 RAE1P78406 368 aaKnown RBP7.54□□□□□ -1.2
TPM3-215ENST00000469717 ACSM2AQ08AH3 577 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 BOP1Q14137 746 aaKnown RBP7.54□□□□□ -1.2
TPM3-215ENST00000469717 DOC2AQ14183 400 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 CHRNA6Q15825 494 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 ACSM2BQ68CK6 577 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 ATRAIDQ6UW56 229 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 CASP12Q6UXS9 341 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 DEF8Q6ZN54 512 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 GDPGP1Q6ZNW5 385 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 DDX53Q86TM3 631 aaKnown RBP7.54□□□□□ -1.2
TPM3-215ENST00000469717 TRIM69Q86WT6 500 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 MARCH9Q86YJ5 346 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 OR4D11Q8NGI4 311 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 P2RY13Q9BPV8 354 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 MAPKAP1Q9BPZ7 522 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 SLC35A5Q9BS91 424 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 CHIAQ9BZP6 476 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 FZD3Q9NPG1 666 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 NKIRAS2Q9NYR9 191 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 PIPSLA2A3N6 862 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 SCAMP2O15127 329 aaKnown RBP7.53□□□□□ -1.2
TPM3-215ENST00000469717 CKMP06732 381 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 ANXA4P09525 319 aaPredicted RBP7.53□□□□□ -1.2
TPM3-215ENST00000469717 CPEP16870 476 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 CELP19835 753 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 SLC6A1P30531 599 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 CCR7P32248 378 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 SOAT1P35610 550 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 CHI3L1P36222 383 aaPredicted RBP7.53□□□□□ -1.2
TPM3-215ENST00000469717 PURAQ00577 322 aaKnown RBP7.53□□□□□ -1.2
TPM3-215ENST00000469717 SRSF11Q05519 484 aaKnown RBP7.53□□□□□ -1.2
TPM3-215ENST00000469717 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.53□□□□□ -1.2
TPM3-215ENST00000469717 HEPACAMQ14CZ8 416 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 SF3A2Q15428 464 aaKnown RBP7.53□□□□□ -1.2
TPM3-215ENST00000469717 SYT14P1Q58G82 188 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 SERPINA13PQ6UXR4 307 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 TSPAN33Q86UF1 283 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 OR8J2Q8NGG1 315 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 AUTS2Q8WXX7 1259 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 FATE1Q969F0 183 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 FBXO32Q969P5 355 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 OTUB1Q96FW1 271 aaPredicted RBP7.53□□□□□ -1.2
TPM3-215ENST00000469717 GPA33Q99795 319 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 GHITMQ9H3K2 345 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 ZNF624Q9P2J8 865 aaPredicted RBP7.53□□□□□ -1.2
TPM3-215ENST00000469717 TRPM7Q96QT4 1865 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 PLXND1Q9Y4D7 1925 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 A0A1W2PPL8 197 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 HNRNPCL2B2RXH8 293 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 E7EQ34 232 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 TRIM3O75382 744 aaPredicted RBP7.53□□□□□ -1.2
TPM3-215ENST00000469717 GATBO75879 557 aaKnown RBP7.53□□□□□ -1.2
TPM3-215ENST00000469717 CD160O95971 181 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 HOXB6P17509 224 aaKnown RBP7.53□□□□□ -1.2
TPM3-215ENST00000469717 GSTM5P46439 218 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 GATMP50440 423 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 CDK6Q00534 326 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 NFATC2Q13469 925 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 KCNC3Q14003 757 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 MPEG1Q2M385 716 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 ZNF791Q3KP31 576 aaPredicted RBP7.53□□□□□ -1.2
TPM3-215ENST00000469717 PLA1AQ53H76 456 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 IDNKQ5T6J7 187 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 LRFN4Q6PJG9 635 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 TMEM107Q6UX40 140 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 RTL4Q6ZR62 310 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 C17orf107Q6ZR85 190 aa7.53□□□□□ -1.2
TPM3-215ENST00000469717 BCL7CQ8WUZ0 217 aaPredicted RBP7.53□□□□□ -1.2
TPM3-215ENST00000469717 PIGKQ92643 395 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms