RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 VASNQ6EMK4 673 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 FAM180BQ6P0A1 224 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 FAM111BQ6SJ93 734 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 GOLGA7Q7Z5G4 137 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 TAGAPQ8N103 731 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 ZNF615Q8N8J6 731 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 FAM222BQ8WU58 562 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 ZNF597Q96LX8 424 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 NAPGQ99747 312 aaPredicted RBP11.21□□□□□ -0.61
HDAC3-204ENST00000469207 PRDM14Q9GZV8 571 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 OR10A5Q9H207 317 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 IPPKQ9H8X2 491 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 CXorf21Q9HAI6 301 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.21□□□□□ -0.61
HDAC3-204ENST00000469207 WHRNQ9P202 907 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 ZNF629Q9UEG4 869 aaPredicted RBP11.21□□□□□ -0.61
HDAC3-204ENST00000469207 ADGRE2Q9UHX3 823 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 ACOT9Q9Y305 439 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 PCDHGA11Q9Y5H2 935 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 A0A1W2PPR1 153 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 ANKRD33BA6NCL7 494 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 TUBAL3A6NHL2 446 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 OR6C76A6NM76 312 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 H0YIV9 168 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 OR7A17O14581 309 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 TP53I11O14683 189 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 EIF3HO15372 352 aaKnown RBP eCLIP11.2□□□□□ -0.62
HDAC3-204ENST00000469207 NME6O75414 186 aaPredicted RBP11.2□□□□□ -0.62
HDAC3-204ENST00000469207 KLK1P06870 262 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 EPXP11678 715 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 GFAPP14136 432 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 CRABP2P29373 138 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 SERPINB1P30740 379 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 MAGEA4P43358 317 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 MASP1P48740 699 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 XKP51811 444 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 C2orf54Q08AI8 447 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 FUT7Q11130 342 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 TBL3Q12788 808 aaKnown RBP11.2□□□□□ -0.62
HDAC3-204ENST00000469207 GTF2H2Q13888 395 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 FBXW10Q5XX13 1052 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 HLA-DQA1Q5Y7H0 255 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 NSUN5P2Q63ZY6 315 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 GTF2H2CQ6P1K8 395 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 RPS27LQ71UM5 84 aaKnown RBP11.2□□□□□ -0.62
HDAC3-204ENST00000469207 MAATS1Q7Z4T9 603 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 PACS2Q86VP3 889 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 LACC1Q8IV20 430 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 DND1Q8IYX4 353 aaKnown RBP11.2□□□□□ -0.62
HDAC3-204ENST00000469207 PLD6Q8N2A8 252 aaKnown RBP11.2□□□□□ -0.62
HDAC3-204ENST00000469207 C9orf106Q8NAJ2 232 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 OR52B6Q8NGF0 335 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 SLC44A1Q8WWI5 657 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 ABTB1Q969K4 478 aaPredicted RBP11.2□□□□□ -0.62
HDAC3-204ENST00000469207 TP53INP1Q96A56 240 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 GPR78Q96P69 363 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 NODALQ96S42 347 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 CENPKQ9BS16 269 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 NXF5Q9H1B4 397 aaKnown RBP11.2□□□□□ -0.62
HDAC3-204ENST00000469207 PLEKHF2Q9H8W4 249 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 LYARQ9NX58 379 aaKnown RBP11.2□□□□□ -0.62
HDAC3-204ENST00000469207 EHD3Q9NZN3 535 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 CPSF2Q9P2I0 782 aaKnown RBP11.2□□□□□ -0.62
HDAC3-204ENST00000469207 C15orf41Q9Y2V0 281 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 TSC22D4Q9Y3Q8 395 aa11.2□□□□□ -0.62
HDAC3-204ENST00000469207 DNHD1Q96M86 4753 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 A0A1B0GTL3 188 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 EEF1E1-BLOC1S5C9J1V9 151 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 EEF1E1O43324 174 aaKnown RBP11.19□□□□□ -0.62
HDAC3-204ENST00000469207 SNX4O95219 450 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 ATE1O95260 518 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 ABCB1P08183 1280 aaPredicted RBP11.19□□□□□ -0.62
HDAC3-204ENST00000469207 NT5EP21589 574 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 CTSSP25774 331 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 PIK3R1P27986 724 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 PTPN6P29350 595 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 GALNSP34059 522 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 PTGDSP41222 190 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 SRYQ05066 204 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 DUSP2Q05923 314 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 MGAT2Q10469 447 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 ILF2Q12905 390 aaKnown RBP11.19□□□□□ -0.62
HDAC3-204ENST00000469207 CUL3Q13618 768 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 EXOSC7Q15024 291 aaKnown RBP11.19□□□□□ -0.62
HDAC3-204ENST00000469207 FBXL19-AS1Q494R0 122 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 SGO1Q5FBB7 561 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 ZDHHC24Q6UX98 284 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 PAMR1Q6UXH9 720 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 LUZP2Q86TE4 346 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 NUDT13Q86X67 352 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 GALNT12Q8IXK2 581 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 VWA5B2Q8N398 1253 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 C7orf57Q8NEG2 295 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 FAM83FQ8NEG4 500 aaPredicted RBP11.19□□□□□ -0.62
HDAC3-204ENST00000469207 SPATA4Q8NEY3 305 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 OR4K14Q8NGD5 310 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 RDH11Q8TC12 318 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 FBXO25Q8TCJ0 367 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 NTNG2Q96CW9 530 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 NSUN5Q96P11 429 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms