RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM5-209	ENST00000468872	MS4A18	Q3C1V0	323 aa		4.17	□□□□□ -1.74
LSM5-209	ENST00000468872	AGK	Q53H12	422 aa		4.17	□□□□□ -1.74
LSM5-209	ENST00000468872	STEAP1B	Q6NZ63	245 aa		4.17	□□□□□ -1.74
LSM5-209	ENST00000468872	ZNF497	Q6ZNH5	498 aa		4.17	□□□□□ -1.74
LSM5-209	ENST00000468872	FAM131B	Q86XD5	332 aa		4.17	□□□□□ -1.74
LSM5-209	ENST00000468872	ZNRF1	Q8ND25	227 aa		4.17	□□□□□ -1.74
LSM5-209	ENST00000468872	RDH11	Q8TC12	318 aa		4.17	□□□□□ -1.74
LSM5-209	ENST00000468872	DQX1	Q8TE96	717 aa	Known RBP	4.17	□□□□□ -1.74
LSM5-209	ENST00000468872	PCNP	Q8WW12	178 aa	Known RBP	4.17	□□□□□ -1.74
LSM5-209	ENST00000468872	CAPNS2	Q96L46	248 aa		4.17	□□□□□ -1.74
LSM5-209	ENST00000468872	DEFB118	Q96PH6	123 aa		4.17	□□□□□ -1.74
LSM5-209	ENST00000468872	ACCS	Q96QU6	501 aa		4.17	□□□□□ -1.74
LSM5-209	ENST00000468872	KCNK16	Q96T55	309 aa		4.17	□□□□□ -1.74
LSM5-209	ENST00000468872	DEPP	Q9NTK1	212 aa		4.17	□□□□□ -1.74
LSM5-209	ENST00000468872	CNOT2	Q9NZN8	540 aa	Known RBP	4.17	□□□□□ -1.74
LSM5-209	ENST00000468872	THYN1	Q9P016	225 aa		4.17	□□□□□ -1.74
LSM5-209	ENST00000468872	ACTR3B	Q9P1U1	418 aa		4.17	□□□□□ -1.74
LSM5-209	ENST00000468872	LHX3	Q9UBR4	397 aa		4.17	□□□□□ -1.74
LSM5-209	ENST00000468872	PLA2G4C	Q9UP65	541 aa		4.17	□□□□□ -1.74
LSM5-209	ENST00000468872	ENTPD4	Q9Y227	616 aa		4.17	□□□□□ -1.74
LSM5-209	ENST00000468872	SLC6A5	Q9Y345	797 aa		4.17	□□□□□ -1.74
LSM5-209	ENST00000468872	ATG4B	Q9Y4P1	393 aa		4.17	□□□□□ -1.74
LSM5-209	ENST00000468872	FAM135B	Q49AJ0	1406 aa		4.17	□□□□□ -1.74
LSM5-209	ENST00000468872	WDR97	A6NE52	1622 aa		4.17	□□□□□ -1.74
LSM5-209	ENST00000468872	KDM5B	Q9UGL1	1544 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	SHANK3	Q9BYB0	1731 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	BLM	P54132	1417 aa	Predicted RBP	4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	PTPRU	Q92729	1446 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	NDUFAF8	A1L188	74 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	IGLON5	A6NGN9	336 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872		H7C423	109 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	RASGRF2	O14827	1237 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	ARPC1B	O15143	372 aa	Known RBP	4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	DCX	O43602	365 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	SSX5	O60225	188 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	TRIM49	P0CI25	452 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	TRIM49C	P0CI26	452 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	GHR	P10912	638 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	PTPN4	P29074	926 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	MAT2A	P31153	395 aa	Known RBP	4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	TRIM23	P36406	574 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	NPY2R	P49146	381 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	CDKL1	Q00532	357 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	LCE3C	Q5T5A8	94 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	LIPK	Q5VXJ0	399 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	FAM159A	Q6UWV7	190 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	TMEM26	Q6ZUK4	368 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	LINC00518	Q8N0U6	118 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	COLGALT1	Q8NBJ5	622 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	OR56B1	Q8NGI3	324 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	OR1K1	Q8NGR3	316 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	OR4F5	Q8NH21	305 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	LRRC15	Q8TF66	581 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	PHYHIP	Q92561	330 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	C14orf79	Q96F83	325 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	AGAP3	Q96P47	875 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872	ATG10	Q9H0Y0	220 aa		4.16	□□□□□ -1.74
LSM5-209	ENST00000468872		A0A0C4DFX4	3053 aa		4.15	□□□□□ -1.74
LSM5-209	ENST00000468872	IGLV4-3	A0A075B6K6	122 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	IGKV3D-20	A0A0C4DH25	116 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	TRGV8	A0A0C4DH27	118 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872		A0A1B0GVY2	172 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	DUSP11	O75319	330 aa	Known RBP	4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	IGHG1	P01857	330 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	FUT1	P19526	365 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	ZNF10	P21506	573 aa	Predicted RBP	4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	PPP2R1A	P30153	589 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	CHRNA3	P32297	505 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	SLC6A8	P48029	635 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	ZNF131	P52739	623 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	NDST1	P52848	882 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	SLC26A5	P58743	744 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	GMFB	P60983	142 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	SRPX	P78539	464 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	BTG3	Q14201	252 aa	Predicted RBP	4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	CEBPE	Q15744	281 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	DDI2	Q5TDH0	399 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	WDR25	Q64LD2	544 aa	Predicted RBP	4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	ASRGL1	Q7L266	308 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	GPR142	Q7Z601	462 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	AMZ2	Q86W34	360 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	RNF148	Q8N7C7	305 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	BANP	Q8N9N5	519 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	MINDY2	Q8NBR6	621 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	ICA1L	Q8NDH6	482 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	MIPOL1	Q8TD10	442 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	CHPT1	Q8WUD6	406 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	TMEM37	Q8WXS4	190 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	SLC45A3	Q96JT2	553 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	ZNF599	Q96NL3	588 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	IWS1	Q96ST2	819 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	NLN	Q9BYT8	704 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	LIME1	Q9H400	295 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	TMEM231	Q9H6L2	316 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	NT5DC2	Q9H857	520 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	MOB1A	Q9H8S9	216 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	NGB	Q9NPG2	151 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	MIOX	Q9UGB7	285 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	ZNF175	Q9Y473	711 aa		4.15	□□□□□ -1.75
LSM5-209	ENST00000468872	MTF2	Q9Y483	593 aa	Predicted RBP	4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms