RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 CES1P1Q9UKY3 287 aa22.45■■□□□ 1.18
PTCH1-210ENST00000468211 DTX4Q9Y2E6 619 aa22.45■■□□□ 1.18
PTCH1-210ENST00000468211 URI1O94763 535 aaPredicted RBP22.44■■□□□ 1.18
PTCH1-210ENST00000468211 RPS17P08708 135 aaKnown RBP22.44■■□□□ 1.18
PTCH1-210ENST00000468211 NT5EP21589 574 aa22.44■■□□□ 1.18
PTCH1-210ENST00000468211 GDF1P27539 372 aa22.44■■□□□ 1.18
PTCH1-210ENST00000468211 ECHS1P30084 290 aa22.44■■□□□ 1.18
PTCH1-210ENST00000468211 WNT3P56703 355 aa22.44■■□□□ 1.18
PTCH1-210ENST00000468211 CCNYL2Q5T2Q4 361 aa22.44■■□□□ 1.18
PTCH1-210ENST00000468211 LETMD1Q6P1Q0 360 aa22.44■■□□□ 1.18
PTCH1-210ENST00000468211 MILR1Q7Z6M3 343 aa22.44■■□□□ 1.18
PTCH1-210ENST00000468211 METTL4Q8N3J2 472 aa22.44■■□□□ 1.18
PTCH1-210ENST00000468211 SIMC1Q8NDZ2 872 aa22.44■■□□□ 1.18
PTCH1-210ENST00000468211 SPPL2AQ8TCT8 520 aa22.44■■□□□ 1.18
PTCH1-210ENST00000468211 DCAKDQ8WVC6 231 aa22.44■■□□□ 1.18
PTCH1-210ENST00000468211 NRGNQ92686 78 aa22.44■■□□□ 1.18
PTCH1-210ENST00000468211 ZNF597Q96LX8 424 aa22.44■■□□□ 1.18
PTCH1-210ENST00000468211 RILPQ96NA2 401 aa22.44■■□□□ 1.18
PTCH1-210ENST00000468211 MTRF1LQ9UGC7 380 aaKnown RBP22.44■■□□□ 1.18
PTCH1-210ENST00000468211 ADAM29Q9UKF5 820 aa22.44■■□□□ 1.18
PTCH1-210ENST00000468211 TMCO1Q9UM00 188 aa22.44■■□□□ 1.18
PTCH1-210ENST00000468211 C2CD3Q4AC94 2353 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 AKAP6Q13023 2319 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 TRIM49D1C9J1S8 452 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 POC1B-GALNT4F8VUJ3 575 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 SMIM24O75264 130 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 GABRA1P14867 456 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 SOX18P35713 384 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 CDH13P55290 713 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 DUSP2Q05923 314 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 MGAT2Q10469 447 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 GALNT1Q10472 559 aaPredicted RBP22.43■■□□□ 1.18
PTCH1-210ENST00000468211 IFT88Q13099 833 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 DUSP8Q13202 625 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 GGTA1PQ4G0N0 100 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 RIPPLY2Q5TAB7 128 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 HLA-DQA1Q5Y7H0 255 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 TMEM198Q66K66 360 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 DESI1Q6ICB0 168 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 FAM111BQ6SJ93 734 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 COMMD6Q7Z4G1 85 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 WDR53Q7Z5U6 358 aaPredicted RBP22.43■■□□□ 1.18
PTCH1-210ENST00000468211 CLYBLQ8N0X4 340 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 MMGT1Q8N4V1 131 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 ZNF483Q8TF39 744 aaPredicted RBP22.43■■□□□ 1.18
PTCH1-210ENST00000468211 IFT81Q8WYA0 676 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 C16orf45Q96MC5 204 aaPredicted RBP22.43■■□□□ 1.18
PTCH1-210ENST00000468211 ANGPTL4Q9BY76 406 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 NXF5Q9H1B4 397 aaKnown RBP22.43■■□□□ 1.18
PTCH1-210ENST00000468211 ZNF225Q9UK10 706 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 SLC12A4Q9UP95 1085 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 L3MBTL1Q9Y468 752 aa22.43■■□□□ 1.18
PTCH1-210ENST00000468211 HRNRQ86YZ3 2850 aaPredicted RBP22.42■■□□□ 1.18
PTCH1-210ENST00000468211 TP53I11O14683 189 aa22.42■■□□□ 1.18
PTCH1-210ENST00000468211 PDYNP01213 254 aa22.42■■□□□ 1.18
PTCH1-210ENST00000468211 PORP16435 677 aaPredicted RBP22.42■■□□□ 1.18
PTCH1-210ENST00000468211 GPX3P22352 226 aa22.42■■□□□ 1.18
PTCH1-210ENST00000468211 SERPINB9P50453 376 aa22.42■■□□□ 1.18
PTCH1-210ENST00000468211 MAPK12P53778 367 aa22.42■■□□□ 1.18
PTCH1-210ENST00000468211 CRYZQ08257 329 aaKnown RBP22.42■■□□□ 1.18
PTCH1-210ENST00000468211 MYBPHQ13203 477 aa22.42■■□□□ 1.18
PTCH1-210ENST00000468211 TSNAXIP1Q2TAA8 658 aa22.42■■□□□ 1.18
PTCH1-210ENST00000468211 SPNS3Q6ZMD2 512 aa22.42■■□□□ 1.18
PTCH1-210ENST00000468211 TMEM200AQ86VY9 491 aa22.42■■□□□ 1.18
PTCH1-210ENST00000468211 LIX1Q8N485 282 aa22.42■■□□□ 1.18
PTCH1-210ENST00000468211 NAXEQ8NCW5 288 aa22.42■■□□□ 1.18
PTCH1-210ENST00000468211 NTNG2Q96CW9 530 aa22.42■■□□□ 1.18
PTCH1-210ENST00000468211 GNRHR2Q96P88 292 aa22.42■■□□□ 1.18
PTCH1-210ENST00000468211 UBQLN3Q9H347 655 aa22.42■■□□□ 1.18
PTCH1-210ENST00000468211 ELOVL6Q9H5J4 265 aa22.42■■□□□ 1.18
PTCH1-210ENST00000468211 RYDENQ9NUL5 291 aaKnown RBP22.42■■□□□ 1.18
PTCH1-210ENST00000468211 AHSPQ9NZD4 102 aa22.42■■□□□ 1.18
PTCH1-210ENST00000468211 B4GALT7Q9UBV7 327 aa22.42■■□□□ 1.18
PTCH1-210ENST00000468211 PCDHA9Q9Y5H5 950 aa22.42■■□□□ 1.18
PTCH1-210ENST00000468211 C15orf38-AP3S2A0A0A6YYH1 394 aa22.41■■□□□ 1.18
PTCH1-210ENST00000468211 A8MT66 165 aa22.41■■□□□ 1.18
PTCH1-210ENST00000468211 COL6A2P12110 1019 aa22.41■■□□□ 1.18
PTCH1-210ENST00000468211 FEN1P39748 380 aaKnown RBP22.41■■□□□ 1.18
PTCH1-210ENST00000468211 CASP3P42574 277 aa22.41■■□□□ 1.18
PTCH1-210ENST00000468211 EXOSC7Q15024 291 aaKnown RBP22.41■■□□□ 1.18
PTCH1-210ENST00000468211 NNATQ16517 81 aa22.41■■□□□ 1.18
PTCH1-210ENST00000468211 WHAMMP3Q1A5X7 153 aa22.41■■□□□ 1.18
PTCH1-210ENST00000468211 PRICKLE4Q2TBC4 344 aa22.41■■□□□ 1.18
PTCH1-210ENST00000468211 SLC25A35Q3KQZ1 300 aa22.41■■□□□ 1.18
PTCH1-210ENST00000468211 TBCELQ5QJ74 424 aa22.41■■□□□ 1.18
PTCH1-210ENST00000468211 FAM180BQ6P0A1 224 aa22.41■■□□□ 1.18
PTCH1-210ENST00000468211 SLC48A1Q6P1K1 146 aa22.41■■□□□ 1.18
PTCH1-210ENST00000468211 PAGE2Q7Z2X7 111 aa22.41■■□□□ 1.18
PTCH1-210ENST00000468211 RELL2Q8NC24 303 aaPredicted RBP22.41■■□□□ 1.18
PTCH1-210ENST00000468211 TNIP2Q8NFZ5 429 aa22.41■■□□□ 1.18
PTCH1-210ENST00000468211 TM4SF18Q96CE8 201 aa22.41■■□□□ 1.18
PTCH1-210ENST00000468211 HBEGFQ99075 208 aa22.41■■□□□ 1.18
PTCH1-210ENST00000468211 FMO2Q99518 471 aa22.41■■□□□ 1.18
PTCH1-210ENST00000468211 TIMP4Q99727 224 aa22.41■■□□□ 1.18
PTCH1-210ENST00000468211 MRPL57Q9BQC6 102 aaKnown RBP22.41■■□□□ 1.18
PTCH1-210ENST00000468211 MRPL46Q9H2W6 279 aaKnown RBP22.41■■□□□ 1.18
PTCH1-210ENST00000468211 MAT2BQ9NZL9 334 aa22.41■■□□□ 1.18
PTCH1-210ENST00000468211 PCDHGB3Q9Y5G1 929 aa22.41■■□□□ 1.18
PTCH1-210ENST00000468211 IKBKGQ9Y6K9 419 aa22.41■■□□□ 1.18
PTCH1-210ENST00000468211 SETD2Q9BYW2 2564 aaPredicted RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms