RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 TMED10P49755 219 aaKnown RBP17.58■□□□□ 0.4
COL7A1-207ENST00000467985 PKNOX1P55347 436 aa17.58■□□□□ 0.4
COL7A1-207ENST00000467985 NRG3P56975 720 aa17.58■□□□□ 0.4
COL7A1-207ENST00000467985 KCNJ2P63252 427 aa17.58■□□□□ 0.4
COL7A1-207ENST00000467985 SLC10A1Q14973 349 aa17.58■□□□□ 0.4
COL7A1-207ENST00000467985 NTRK2Q16620 822 aa17.58■□□□□ 0.4
COL7A1-207ENST00000467985 TBCELQ5QJ74 424 aa17.58■□□□□ 0.4
COL7A1-207ENST00000467985 TRILQ7L0X0 811 aa17.58■□□□□ 0.4
COL7A1-207ENST00000467985 MCEMP1Q8IX19 187 aa17.58■□□□□ 0.4
COL7A1-207ENST00000467985 CA5BP1Q8WTZ4 195 aa17.58■□□□□ 0.4
COL7A1-207ENST00000467985 OR10A5Q9H207 317 aa17.58■□□□□ 0.4
COL7A1-207ENST00000467985 EPB41L4BQ9H329 900 aa17.58■□□□□ 0.4
COL7A1-207ENST00000467985 ZFP64Q9NPA5 681 aa17.58■□□□□ 0.4
COL7A1-207ENST00000467985 CES1P1Q9UKY3 287 aa17.58■□□□□ 0.4
COL7A1-207ENST00000467985 CHCHD2Q9Y6H1 151 aaPredicted RBP17.58■□□□□ 0.4
COL7A1-207ENST00000467985 EML6Q6ZMW3 1958 aa17.58■□□□□ 0.4
COL7A1-207ENST00000467985 DNAJC13O75165 2243 aa17.57■□□□□ 0.4
COL7A1-207ENST00000467985 SMIM23A6NLE4 172 aa17.57■□□□□ 0.4
COL7A1-207ENST00000467985 GOLGA8RI6L899 631 aa17.57■□□□□ 0.4
COL7A1-207ENST00000467985 HCN1O60741 890 aa17.57■□□□□ 0.4
COL7A1-207ENST00000467985 ATP1B1P05026 303 aa17.57■□□□□ 0.4
COL7A1-207ENST00000467985 CSNK2A2P19784 350 aaPredicted RBP17.57■□□□□ 0.4
COL7A1-207ENST00000467985 NT5EP21589 574 aa17.57■□□□□ 0.4
COL7A1-207ENST00000467985 HMOX2P30519 316 aa17.57■□□□□ 0.4
COL7A1-207ENST00000467985 NAA20P61599 178 aa17.57■□□□□ 0.4
COL7A1-207ENST00000467985 ACAD11Q709F0 780 aa17.57■□□□□ 0.4
COL7A1-207ENST00000467985 C1orf52Q8N6N3 182 aaKnown RBP17.57■□□□□ 0.4
COL7A1-207ENST00000467985 ZNF615Q8N8J6 731 aa17.57■□□□□ 0.4
COL7A1-207ENST00000467985 OR10G3Q8NGC4 313 aa17.57■□□□□ 0.4
COL7A1-207ENST00000467985 MZB1Q8WU39 189 aa17.57■□□□□ 0.4
COL7A1-207ENST00000467985 ASB5Q8WWX0 329 aa17.57■□□□□ 0.4
COL7A1-207ENST00000467985 TM4SF18Q96CE8 201 aa17.57■□□□□ 0.4
COL7A1-207ENST00000467985 SMC6Q96SB8 1091 aa17.57■□□□□ 0.4
COL7A1-207ENST00000467985 SECISBP2Q96T21 854 aaKnown RBP17.57■□□□□ 0.4
COL7A1-207ENST00000467985 QPCTLQ9NXS2 382 aa17.57■□□□□ 0.4
COL7A1-207ENST00000467985 TBK1Q9UHD2 729 aa17.57■□□□□ 0.4
COL7A1-207ENST00000467985 MCM8Q9UJA3 840 aa17.57■□□□□ 0.4
COL7A1-207ENST00000467985 CFL2Q9Y281 166 aa17.57■□□□□ 0.4
COL7A1-207ENST00000467985 ZNF780BQ9Y6R6 833 aa17.57■□□□□ 0.4
COL7A1-207ENST00000467985 PKDREJQ9NTG1 2253 aa17.57■□□□□ 0.4
COL7A1-207ENST00000467985 OTOGQ6ZRI0 2925 aa17.56■□□□□ 0.4
COL7A1-207ENST00000467985 ATP6AP2A0A1C7CYW4 349 aa17.56■□□□□ 0.4
COL7A1-207ENST00000467985 A0A1W2PS29 197 aa17.56■□□□□ 0.4
COL7A1-207ENST00000467985 ANKRD33BA6NCL7 494 aa17.56■□□□□ 0.4
COL7A1-207ENST00000467985 NPIPA2E9PIF3 369 aa17.56■□□□□ 0.4
COL7A1-207ENST00000467985 NPIPA3F8WFD2 350 aa17.56■□□□□ 0.4
COL7A1-207ENST00000467985 AQP7O14520 342 aa17.56■□□□□ 0.4
COL7A1-207ENST00000467985 ERAL1O75616 437 aaKnown RBP17.56■□□□□ 0.4
COL7A1-207ENST00000467985 ATP6AP2O75787 350 aa17.56■□□□□ 0.4
COL7A1-207ENST00000467985 MAN2A2P49641 1150 aa17.56■□□□□ 0.4
COL7A1-207ENST00000467985 NR0B1P51843 470 aaKnown RBP17.56■□□□□ 0.4
COL7A1-207ENST00000467985 RPP38P78345 283 aaKnown RBP17.56■□□□□ 0.4
COL7A1-207ENST00000467985 MAP4K2Q12851 820 aa17.56■□□□□ 0.4
COL7A1-207ENST00000467985 RPS6KA2Q15349 733 aa17.56■□□□□ 0.4
COL7A1-207ENST00000467985 SPIN4Q56A73 249 aa17.56■□□□□ 0.4
COL7A1-207ENST00000467985 EMC4Q5J8M3 183 aa17.56■□□□□ 0.4
COL7A1-207ENST00000467985 BEND6Q5SZJ8 279 aaPredicted RBP17.56■□□□□ 0.4
COL7A1-207ENST00000467985 NCCRP1Q6ZVX7 275 aaPredicted RBP17.56■□□□□ 0.4
COL7A1-207ENST00000467985 VWA5B2Q8N398 1253 aa17.56■□□□□ 0.4
COL7A1-207ENST00000467985 CHTF18Q8WVB6 975 aa17.56■□□□□ 0.4
COL7A1-207ENST00000467985 SARAFQ96BY9 339 aa17.56■□□□□ 0.4
COL7A1-207ENST00000467985 SDCCAG3Q96C92 435 aa17.56■□□□□ 0.4
COL7A1-207ENST00000467985 KLHL29Q96CT2 875 aa17.56■□□□□ 0.4
COL7A1-207ENST00000467985 HBEGFQ99075 208 aa17.56■□□□□ 0.4
COL7A1-207ENST00000467985 LDAHQ9H6V9 325 aa17.56■□□□□ 0.4
COL7A1-207ENST00000467985 B4GALT7Q9UBV7 327 aa17.56■□□□□ 0.4
COL7A1-207ENST00000467985 HRH3Q9Y5N1 445 aa17.56■□□□□ 0.4
COL7A1-207ENST00000467985 NPFFR2Q9Y5X5 522 aa17.56■□□□□ 0.4
COL7A1-207ENST00000467985 FIGNL2A6NMB9 653 aa17.55■□□□□ 0.4
COL7A1-207ENST00000467985 H3BQF6 201 aa17.55■□□□□ 0.4
COL7A1-207ENST00000467985 GLRA3O75311 464 aa17.55■□□□□ 0.4
COL7A1-207ENST00000467985 ESRRBO95718 433 aa17.55■□□□□ 0.4
COL7A1-207ENST00000467985 SHBGP04278 402 aa17.55■□□□□ 0.4
COL7A1-207ENST00000467985 NUDT17P0C025 328 aa17.55■□□□□ 0.4
COL7A1-207ENST00000467985 CT62P0C5K7 136 aa17.55■□□□□ 0.4
COL7A1-207ENST00000467985 MYL2P10916 166 aa17.55■□□□□ 0.4
COL7A1-207ENST00000467985 PRF1P14222 555 aa17.55■□□□□ 0.4
COL7A1-207ENST00000467985 DRD2P14416 443 aa17.55■□□□□ 0.4
COL7A1-207ENST00000467985 GXYLT1Q4G148 440 aa17.55■□□□□ 0.4
COL7A1-207ENST00000467985 TCHHL1Q5QJ38 904 aaPredicted RBP17.55■□□□□ 0.4
COL7A1-207ENST00000467985 PRAMEF20Q5VT98 475 aa17.55■□□□□ 0.4
COL7A1-207ENST00000467985 GDF7Q7Z4P5 450 aa17.55■□□□□ 0.4
COL7A1-207ENST00000467985 SAMD14Q8IZD0 417 aaPredicted RBP17.55■□□□□ 0.4
COL7A1-207ENST00000467985 LRRC25Q8N386 305 aaPredicted RBP17.55■□□□□ 0.4
COL7A1-207ENST00000467985 RND1Q92730 232 aa17.55■□□□□ 0.4
COL7A1-207ENST00000467985 ADIPOR1Q96A54 375 aa17.55■□□□□ 0.4
COL7A1-207ENST00000467985 DOHHQ9BU89 302 aa17.55■□□□□ 0.4
COL7A1-207ENST00000467985 ZNF703Q9H7S9 590 aaPredicted RBP17.55■□□□□ 0.4
COL7A1-207ENST00000467985 CNOT11Q9UKZ1 510 aaKnown RBP17.55■□□□□ 0.4
COL7A1-207ENST00000467985 TLDC2A0PJX2 215 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 SNX4O95219 450 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 H2AFXP16104 143 aaPredicted RBP17.54■□□□□ 0.4
COL7A1-207ENST00000467985 NAGAP17050 411 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 KRT15P19012 456 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 S1PR1P21453 382 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 ACVR2AP27037 513 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 CHRNB4P30926 498 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 FEN1P39748 380 aaKnown RBP17.54■□□□□ 0.4
COL7A1-207ENST00000467985 SLCO1A2P46721 670 aa17.54■□□□□ 0.4
COL7A1-207ENST00000467985 CCT5P48643 541 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms