RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 ATAD3AQ9NVI7 634 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 SNX6Q9UNH7 406 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 B9D1Q9UPM9 204 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 MRPS7Q9Y2R9 242 aaKnown RBP3.55□□□□□ -1.84
SMC4-208ENST00000467468 SLC6A5Q9Y345 797 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 MAB21L2Q9Y586 359 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 RNF215Q9Y6U7 377 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 OR5H15A6NDH6 313 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 NTN3O00634 580 aaPredicted RBP3.54□□□□□ -1.84
SMC4-208ENST00000467468 XPO1O14980 1071 aaKnown RBP3.54□□□□□ -1.84
SMC4-208ENST00000467468 MAGEB3O15480 346 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 MTRF1O75570 445 aaKnown RBP3.54□□□□□ -1.84
SMC4-208ENST00000467468 RPLP0P05388 317 aaKnown RBP3.54□□□□□ -1.84
SMC4-208ENST00000467468 CD48P09326 243 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 CEBPBP17676 345 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 GLRA2P23416 452 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 CHRNB4P30926 498 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 TRIM23P36406 574 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 MTIF2P46199 727 aaKnown RBP3.54□□□□□ -1.84
SMC4-208ENST00000467468 ACADVLP49748 655 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 VEGFCP49767 419 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 SGSHP51688 502 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 ABCE1P61221 599 aaKnown RBP3.54□□□□□ -1.84
SMC4-208ENST00000467468 RPL27P61353 136 aaKnown RBP3.54□□□□□ -1.84
SMC4-208ENST00000467468 PPIAP62937 165 aaKnown RBP3.54□□□□□ -1.84
SMC4-208ENST00000467468 HERVK_113P63132 956 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 ERVK-8P63133 956 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 HMGN5P82970 282 aaKnown RBP3.54□□□□□ -1.84
SMC4-208ENST00000467468 SPIBQ01892 262 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 NFATC2Q13469 925 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 SHROOM1Q2M3G4 852 aaPredicted RBP3.54□□□□□ -1.84
SMC4-208ENST00000467468 PARP6Q2NL67 630 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 ZNF699Q32M78 642 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 POM121L1PQ3SYA9 428 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 USH1GQ495M9 461 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 LRRC23Q53EV4 343 aaPredicted RBP3.54□□□□□ -1.84
SMC4-208ENST00000467468 ZNF311Q5JNZ3 666 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 FFAR4Q5NUL3 377 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 CENPPQ6IPU0 288 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 STEAP1BQ6NZ63 245 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 FBXL22Q6P050 247 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 CBLN3Q6UW01 205 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 CHMP1BQ7LBR1 199 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 PTAR1Q7Z6K3 402 aaPredicted RBP3.54□□□□□ -1.84
SMC4-208ENST00000467468 GPBP1Q86WP2 473 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 CATSPERDQ86XM0 798 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 CBWD2Q8IUF1 395 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 LINC00518Q8N0U6 118 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 ARFGAP2Q8N6H7 521 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 WBP1Q96G27 269 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 VPS35Q96QK1 796 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 TSPAN18Q96SJ8 248 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 KRT12Q99456 494 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 ZSCAN5AQ9BUG6 496 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 ERVK-6Q9BXR3 956 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 LRRCC1Q9C099 1032 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 SLC25A19Q9HC21 320 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 DCAF16Q9NXF7 216 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 KLK11Q9UBX7 282 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 ATP6V1HQ9UI12 483 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 LNPEPQ9UIQ6 1025 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 RNF115Q9Y4L5 304 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 ZHX2Q9Y6X8 837 aa3.54□□□□□ -1.84
SMC4-208ENST00000467468 PARD3Q8TEW0 1356 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 IQCMA0A1B0GVH7 501 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 LOC390937A0A1W2PQ73 354 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 NPIPB9F8W1W9 429 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 TNFSF12O43508 249 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 ZNF821O75541 412 aaPredicted RBP3.53□□□□□ -1.84
SMC4-208ENST00000467468 RHOBTB1O94844 696 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 FHP07954 510 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 IQCF3P0C7M6 154 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 CLUP10909 449 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 PDHBP11177 359 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 PPP2R1AP30153 589 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 MAP2K2P36507 400 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 TSFMP43897 325 aaKnown RBP3.53□□□□□ -1.84
SMC4-208ENST00000467468 METAP1P53582 386 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 NAPAP54920 295 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 IL24Q13007 206 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 ITPK1Q13572 414 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 GCKRQ14397 625 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 TRIP10Q15642 601 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 PDK4Q16654 411 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 TPD52L1Q16890 204 aaPredicted RBP3.53□□□□□ -1.84
SMC4-208ENST00000467468 HKDC1Q2TB90 917 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 MAJINQ3KP22 176 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 DCAF4L1Q3SXM0 396 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 CFAP157Q5JU67 520 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 RHBDD2Q6NTF9 364 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 NEPROQ6NW34 567 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 LHFPL4Q7Z7J7 247 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 RANBP3LQ86VV4 465 aaPredicted RBP3.53□□□□□ -1.84
SMC4-208ENST00000467468 FAM131BQ86XD5 332 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 RELL2Q8NC24 303 aaPredicted RBP3.53□□□□□ -1.84
SMC4-208ENST00000467468 STEAP2Q8NFT2 490 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 TMEM190Q8WZ59 177 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 PNPLA2Q96AD5 504 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 C4orf36Q96KX1 117 aa3.53□□□□□ -1.84
SMC4-208ENST00000467468 VSTM2LQ96N03 204 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms