RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 KCNK13Q9HB14 408 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 MMP25Q9NPA2 562 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 TBC1D23Q9NUY8 699 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 INTS10Q9NVR2 710 aaKnown RBP5.05□□□□□ -1.6
PTCD3-207ENST00000467273 QPCTLQ9NXS2 382 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 TRPC4Q9UBN4 977 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 MYO6Q9UM54 1294 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 MAU2Q9Y6X3 613 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 SCN2AQ99250 2005 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 MEGF8Q7Z7M0 2845 aa5.05□□□□□ -1.6
PTCD3-207ENST00000467273 C5orf60A6NFR6 353 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 GABRR3A8MPY1 467 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 TXNDC9O14530 226 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 BCKDKO14874 412 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 WDR1O75083 606 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 AP2A2O94973 939 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 CHEK2O96017 543 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 ANXA5P08758 320 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 ERVK-10P10266 1014 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 IL11P20809 199 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 MCM3P25205 808 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 PTPN3P26045 913 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 MGAT1P26572 445 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 PDHA2P29803 388 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 PEBP1P30086 187 aaKnown RBP5.04□□□□□ -1.6
PTCD3-207ENST00000467273 PKLRP30613 574 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 SKIV2L2P42285 1042 aaKnown RBP5.04□□□□□ -1.6
PTCD3-207ENST00000467273 ASMTP46597 345 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 CYB561P49447 251 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 NR1H2P55055 460 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 VSX2P58304 361 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-207ENST00000467273 SORDQ00796 357 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 KLHL30Q0D2K2 578 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 FASTKQ14296 549 aaKnown RBP5.04□□□□□ -1.6
PTCD3-207ENST00000467273 PRTGQ2VWP7 1150 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 CMPK2Q5EBM0 449 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 SIRPB2Q5JXA9 342 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 HMBOX1Q6NT76 420 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 B3GNT6Q6ZMB0 384 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 MTERF4Q7Z6M4 381 aaKnown RBP5.04□□□□□ -1.6
PTCD3-207ENST00000467273 SLC13A5Q86YT5 568 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-207ENST00000467273 CRLF3Q8IUI8 442 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 PRSS58Q8IYP2 241 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 CCDC170Q8IYT3 715 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 OR8H3Q8N146 312 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 ZNF527Q8NB42 609 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 ZFP62Q8NB50 900 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-207ENST00000467273 NEK11Q8NG66 645 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 SUN5Q8TC36 379 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 SMPDL3BQ92485 455 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 RNASE6Q93091 150 aaKnown RBP5.04□□□□□ -1.6
PTCD3-207ENST00000467273 MARS2Q96GW9 593 aaKnown RBP5.04□□□□□ -1.6
PTCD3-207ENST00000467273 NEU1Q99519 415 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 TTYH2Q9BSA4 534 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 CNPPD1Q9BV87 410 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 HES7Q9BYE0 225 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 TRIM7Q9C029 511 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 GLOD4Q9HC38 313 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 VSX1Q9NZR4 365 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-207ENST00000467273 GRHPRQ9UBQ7 328 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 FAM153AQ9UHL3 310 aa5.04□□□□□ -1.6
PTCD3-207ENST00000467273 KRTAP23-1A1A580 65 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 HSPB2A8KAH6 182 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 KIF2AO00139 706 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-207ENST00000467273 AP3B1O00203 1094 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 CLDN4O14493 209 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 EPHB6O15197 1021 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 SMPD2O60906 423 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 CTSVO60911 334 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 FTH1P02794 183 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 TPBGLP0DKB5 382 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 GABRA1P14867 456 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 TCF4P15884 667 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 ITGALP20701 1170 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 GCSHP23434 173 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 ALDH9A1P49189 494 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 ASCL1P50553 236 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 XIAPP98170 497 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 NHLH2Q02577 135 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 RELAQ04206 551 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 GBE1Q04446 702 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 SLC10A2Q12908 348 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-207ENST00000467273 PTK6Q13882 451 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 FAM53BQ14153 422 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 PDK1Q15118 436 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 PPP1R7Q15435 360 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 TAF1AQ15573 450 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-207ENST00000467273 SLC1A5Q15758 541 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 HSPB2Q16082 182 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 GXYLT1Q4G148 440 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 TEX44Q53QW1 395 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 RIPPLY2Q5TAB7 128 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 AP1ARQ63HQ0 302 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 HEPHL1Q6MZM0 1159 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 PGBD2Q6P3X8 592 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 PLEKHM3Q6ZWE6 761 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 IRF2BP2Q7Z5L9 587 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 SNX20Q7Z614 316 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 CIARTQ8N365 385 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-207ENST00000467273 RPRMLQ8N4K4 120 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms