RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 LTB4RQ15722 352 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 MAPKAPK3Q16644 382 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 ST3GAL2Q16842 350 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 TIGD2Q4W5G0 525 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 COQ5Q5HYK3 327 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 ATP1A1-AS1Q5TC04 95 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 FHL5Q5TD97 284 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 JMJD6Q6NYC1 403 aaPredicted RBP14.15□□□□□ -0.14
NPHP4-205ENST00000466897 ZNF551Q7Z340 670 aaPredicted RBP14.15□□□□□ -0.14
NPHP4-205ENST00000466897 OR2L13Q8N349 312 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 CLEC1AQ8NC01 280 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 DNAJB8Q8NHS0 232 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 ELP5Q8TE02 316 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 MOAP1Q96BY2 351 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 ELP4Q96EB1 424 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 LRRC37BQ96QE4 947 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 SLC25A23Q9BV35 468 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 ZNF160Q9HCG1 818 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 SIRT3Q9NTG7 399 aaPredicted RBP14.15□□□□□ -0.14
NPHP4-205ENST00000466897 COPS7AQ9UBW8 275 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 PCDHGB4Q9UN71 923 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 MYOCOSA0A1B0GUC4 107 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 BBIP1A8MTZ0 92 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 A8MUA0 341 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 CAPN14A8MX76 684 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 NR5A2O00482 541 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 PRAMEF2O60811 474 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 PSMG1O95456 288 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 C6orf47O95873 294 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 CLPSP04118 112 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 GPC1P35052 558 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 CLCN2P51788 898 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 PGDP52209 483 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 SLC37A1P57057 533 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 HBA1P69905 142 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 ZNF267Q14586 743 aaPredicted RBP14.14□□□□□ -0.15
NPHP4-205ENST00000466897 TLR1Q15399 786 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 BTBD16Q32M84 506 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 KBTBD2Q8IY47 623 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 CLECL1Q8IZS7 167 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 ARMC10Q8N2F6 343 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 ZNF615Q8N8J6 731 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 ADCY4Q8NFM4 1077 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 OR7G2Q8NG99 324 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 SFXN5Q8TD22 340 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 ITCHQ96J02 903 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 PHF12Q96QT6 1004 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 CNPPD1Q9BV87 410 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 OR8D2Q9GZM6 311 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 ATP13A2Q9NQ11 1180 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 SERHLQ9NQF3 203 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 ARMCX1Q9P291 453 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 C19orf53Q9UNZ5 99 aaPredicted RBP14.14□□□□□ -0.15
NPHP4-205ENST00000466897 ERVK-19Q9WJR5 959 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 CFL2Q9Y281 166 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 KMT2BQ9UMN6 2715 aaPredicted RBP14.14□□□□□ -0.15
NPHP4-205ENST00000466897 EXPH5Q8NEV8 1989 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 PTPRQQ9UMZ3 2332 aa14.14□□□□□ -0.15
NPHP4-205ENST00000466897 ASPDHA6ND91 283 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 UPK1AO00322 258 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 COQ9O75208 318 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 CBX7O95931 251 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 ZCCHC18P0CG32 403 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 PRDX6P30041 224 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 MC3RP41968 323 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 TRPC1P48995 793 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 CDK9P50750 372 aaKnown RBP14.13□□□□□ -0.15
NPHP4-205ENST00000466897 MRPS35P82673 323 aaKnown RBP14.13□□□□□ -0.15
NPHP4-205ENST00000466897 PRR5P85299 388 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 CHAF1BQ13112 559 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 VPS26BQ4G0F5 336 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 TRMT12Q53H54 448 aaKnown RBP14.13□□□□□ -0.15
NPHP4-205ENST00000466897 H3F3CQ6NXT2 135 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 FAM111BQ6SJ93 734 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 TMEM107Q6UX40 140 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 RNF111Q6ZNA4 994 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 GK5Q6ZS86 529 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 DPP10Q8N608 796 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 TRIML2Q8N7C3 387 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 C17orf47Q8NEP4 570 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 OR4A15Q8NGL6 344 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 RP9Q8TA86 221 aaKnown RBP14.13□□□□□ -0.15
NPHP4-205ENST00000466897 NUBPLQ8TB37 319 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 GTF2H4Q92759 462 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 NCLNQ969V3 563 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 VPS33AQ96AX1 596 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 PANX1Q96RD7 426 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 TRIM4Q9C037 500 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 ING2Q9H160 280 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 OR10A5Q9H207 317 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 C3orf14Q9HBI5 128 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 CPNE5Q9HCH3 593 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 DDX18Q9NVP1 670 aaKnown RBP14.13□□□□□ -0.15
NPHP4-205ENST00000466897 PRODH2Q9UF12 536 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 LEF1Q9UJU2 399 aaPredicted RBP14.13□□□□□ -0.15
NPHP4-205ENST00000466897 ZNF223Q9UK11 482 aaPredicted RBP14.13□□□□□ -0.15
NPHP4-205ENST00000466897 ZMIZ1Q9ULJ6 1067 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 ERVK-11Q9UQG0 969 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 NDUFAF1Q9Y375 327 aa14.13□□□□□ -0.15
NPHP4-205ENST00000466897 KCNMB2Q9Y691 235 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms