RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 FAM162AQ96A26 154 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 NSMCE2Q96MF7 247 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 CNPPD1Q9BV87 410 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 TRIM4Q9C037 500 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 SOX17Q9H6I2 414 aaPredicted RBP11.36□□□□□ -0.59
VPS16-206ENST00000466415 EPS8L2Q9H6S3 715 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 ADAP2Q9NPF8 381 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 EQTNQ9NQ60 294 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 PNO1Q9NRX1 252 aaKnown RBP11.36□□□□□ -0.59
VPS16-206ENST00000466415 THUMPD1Q9NXG2 353 aaKnown RBP11.36□□□□□ -0.59
VPS16-206ENST00000466415 MAT2BQ9NZL9 334 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 ACTR3BQ9P1U1 418 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 NXT1Q9UKK6 140 aaKnown RBP11.36□□□□□ -0.59
VPS16-206ENST00000466415 USP22Q9UPT9 525 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 SATB2Q9UPW6 733 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 ASCC3Q8N3C0 2202 aaKnown RBP11.36□□□□□ -0.59
VPS16-206ENST00000466415 VPS13AQ96RL7 3174 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 CACNA1HO95180 2353 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 IGLV3-12A0A075B6K2 115 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 A0A087WV62 115 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 OR2W5A6NFC9 320 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 C5orf58C9J3I9 102 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 TGFBR3LH3BV60 316 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 CXCR6O00574 342 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 SLC30A4O14863 429 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 DKK1O94907 266 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 C1QCP02747 245 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 ALBP02768 609 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 CCNYL3P0C7X3 344 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 NCK1P16333 377 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 GGT1P19440 569 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 ATP6V1B2P21281 511 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 PCGF2P35227 344 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 MAGEA8P43361 318 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 ERFP50548 548 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 PGDP52209 483 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 POLE2P56282 527 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 RPS26P62854 115 aaKnown RBP11.35□□□□□ -0.59
VPS16-206ENST00000466415 MS4A2Q01362 244 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 RBBP4Q09028 425 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 ZNF155Q12901 538 aaPredicted RBP11.35□□□□□ -0.59
VPS16-206ENST00000466415 TARDBPQ13148 414 aaKnown RBP eCLIP11.35□□□□□ -0.59
VPS16-206ENST00000466415 NSDHLQ15738 373 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 VMACQ2NL98 169 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 PRICKLE4Q2TBC4 344 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 GLYATQ6IB77 296 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 LCN8Q6JVE9 175 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 FAM111BQ6SJ93 734 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 C6orf15Q6UXA7 325 aaPredicted RBP11.35□□□□□ -0.59
VPS16-206ENST00000466415 CYP2R1Q6VVX0 501 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 SHISA6Q6ZSJ9 500 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 TMPRSS12Q86WS5 348 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 PTRH1Q86Y79 214 aaKnown RBP11.35□□□□□ -0.59
VPS16-206ENST00000466415 SLC30A8Q8IWU4 369 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 ZZZ3Q8IYH5 903 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 C10orf111Q8N326 155 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 OR2L13Q8N349 312 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 GALNT6Q8NCL4 622 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 SLC26A7Q8TE54 656 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 DOK4Q8TEW6 326 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 ZNF578Q96N58 590 aaPredicted RBP11.35□□□□□ -0.59
VPS16-206ENST00000466415 VN1R1Q9GZP7 353 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 OR51I1Q9H343 314 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 CXorf21Q9HAI6 301 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 SLC22A11Q9NSA0 550 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 ANGPT4Q9Y264 503 aa11.35□□□□□ -0.59
VPS16-206ENST00000466415 NUP210LQ5VU65 1888 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 A8MUA0 341 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 C17orf105B2RV13 164 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 UPK1AO00322 258 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 ACOT8O14734 319 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 PLOD3O60568 738 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 PRAMEF2O60811 474 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 ENTPD5O75356 428 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 ONECUT2O95948 504 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 HMGN2P05204 90 aaKnown RBP11.34□□□□□ -0.59
VPS16-206ENST00000466415 NUDT7P0C024 238 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 CT62P0C5K7 136 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 ARAFP10398 606 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 GALNSP34059 522 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 GZMMP51124 257 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 MVDP53602 400 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 EMP2P54851 167 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 MAP4K2Q12851 820 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 CCNIQ14094 377 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 SCARB2Q14108 478 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 GNA13Q14344 377 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 ZNF267Q14586 743 aaPredicted RBP11.34□□□□□ -0.59
VPS16-206ENST00000466415 ELAVL1Q15717 326 aaKnown RBP11.34□□□□□ -0.59
VPS16-206ENST00000466415 NKG7Q16617 165 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 ZNF630Q2M218 657 aaPredicted RBP11.34□□□□□ -0.59
VPS16-206ENST00000466415 LRRC23Q53EV4 343 aaPredicted RBP11.34□□□□□ -0.59
VPS16-206ENST00000466415 TRMT12Q53H54 448 aaKnown RBP11.34□□□□□ -0.59
VPS16-206ENST00000466415 MTX3Q5HYI7 312 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 ATAD3BQ5T9A4 648 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 INTS11Q5TA45 600 aaKnown RBP11.34□□□□□ -0.59
VPS16-206ENST00000466415 HORMAD2Q8N7B1 307 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 PLPP5Q8NEB5 264 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 OR52R1Q8NGF1 315 aa11.34□□□□□ -0.59
VPS16-206ENST00000466415 FBXO30Q8TB52 745 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms