RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 CRHR1P34998 444 aa20.05■□□□□ 0.8
LIME1-203ENST00000465591 ALDH9A1P49189 494 aa20.05■□□□□ 0.8
LIME1-203ENST00000465591 NAGLUP54802 743 aa20.05■□□□□ 0.8
LIME1-203ENST00000465591 VSNL1P62760 191 aa20.05■□□□□ 0.8
LIME1-203ENST00000465591 TRA2BP62995 288 aaKnown RBP20.05■□□□□ 0.8
LIME1-203ENST00000465591 LTB4RQ15722 352 aa20.05■□□□□ 0.8
LIME1-203ENST00000465591 EMC4Q5J8M3 183 aa20.05■□□□□ 0.8
LIME1-203ENST00000465591 SLC22A10Q63ZE4 541 aa20.05■□□□□ 0.8
LIME1-203ENST00000465591 SLC22A16Q86VW1 577 aa20.05■□□□□ 0.8
LIME1-203ENST00000465591 C4orf33Q8N1A6 199 aa20.05■□□□□ 0.8
LIME1-203ENST00000465591 FAM13CQ8NE31 585 aa20.05■□□□□ 0.8
LIME1-203ENST00000465591 ADCY4Q8NFM4 1077 aa20.05■□□□□ 0.8
LIME1-203ENST00000465591 OR5M3Q8NGP4 307 aa20.05■□□□□ 0.8
LIME1-203ENST00000465591 KLHL29Q96CT2 875 aa20.05■□□□□ 0.8
LIME1-203ENST00000465591 C11orf24Q96F05 449 aaPredicted RBP20.05■□□□□ 0.8
LIME1-203ENST00000465591 CNOT11Q9UKZ1 510 aaKnown RBP20.05■□□□□ 0.8
LIME1-203ENST00000465591 ENTPD4Q9Y227 616 aa20.05■□□□□ 0.8
LIME1-203ENST00000465591 STK38LQ9Y2H1 464 aa20.05■□□□□ 0.8
LIME1-203ENST00000465591 ABCA12Q86UK0 2595 aa20.05■□□□□ 0.8
LIME1-203ENST00000465591 E9PLN8 166 aa20.04■□□□□ 0.8
LIME1-203ENST00000465591 ACOT7O00154 380 aa20.04■□□□□ 0.8
LIME1-203ENST00000465591 PCDH7O60245 1069 aa20.04■□□□□ 0.8
LIME1-203ENST00000465591 IL3P08700 152 aa20.04■□□□□ 0.8
LIME1-203ENST00000465591 KRT4P19013 534 aa20.04■□□□□ 0.8
LIME1-203ENST00000465591 EXOSC7Q15024 291 aaKnown RBP20.04■□□□□ 0.8
LIME1-203ENST00000465591 NTRK2Q16620 822 aa20.04■□□□□ 0.8
LIME1-203ENST00000465591 HYAL4Q2M3T9 481 aa20.04■□□□□ 0.8
LIME1-203ENST00000465591 ARHGAP11AQ6P4F7 1023 aa20.04■□□□□ 0.8
LIME1-203ENST00000465591 FRMD7Q6ZUT3 714 aa20.04■□□□□ 0.8
LIME1-203ENST00000465591 CNPY4Q8N129 248 aa20.04■□□□□ 0.8
LIME1-203ENST00000465591 FBXW8Q8N3Y1 598 aa20.04■□□□□ 0.8
LIME1-203ENST00000465591 RPRMLQ8N4K4 120 aa20.04■□□□□ 0.8
LIME1-203ENST00000465591 MARVELD2Q8N4S9 558 aa20.04■□□□□ 0.8
LIME1-203ENST00000465591 GBP7Q8N8V2 638 aaPredicted RBP20.04■□□□□ 0.8
LIME1-203ENST00000465591 CCDC126Q96EE4 140 aa20.04■□□□□ 0.8
LIME1-203ENST00000465591 VKORC1Q9BQB6 163 aa20.04■□□□□ 0.8
LIME1-203ENST00000465591 EBPLQ9BY08 206 aa20.04■□□□□ 0.8
LIME1-203ENST00000465591 BRINP2Q9C0B6 783 aa20.04■□□□□ 0.8
LIME1-203ENST00000465591 PPCSQ9HAB8 311 aa20.04■□□□□ 0.8
LIME1-203ENST00000465591 ZNF639Q9UID6 485 aa20.04■□□□□ 0.8
LIME1-203ENST00000465591 GRID1Q9ULK0 1009 aa20.04■□□□□ 0.8
LIME1-203ENST00000465591 DLGAP4Q9Y2H0 992 aa20.04■□□□□ 0.8
LIME1-203ENST00000465591 KLF2Q9Y5W3 355 aaPredicted RBP20.04■□□□□ 0.8
LIME1-203ENST00000465591 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.04■□□□□ 0.8
LIME1-203ENST00000465591 LRRC3CA6NJW4 275 aa20.03■□□□□ 0.8
LIME1-203ENST00000465591 CDH16O75309 829 aa20.03■□□□□ 0.8
LIME1-203ENST00000465591 CBX7O95931 251 aa20.03■□□□□ 0.8
LIME1-203ENST00000465591 ATP1B1P05026 303 aa20.03■□□□□ 0.8
LIME1-203ENST00000465591 RFPL3SP0C7P2 107 aa20.03■□□□□ 0.8
LIME1-203ENST00000465591 CSNK2A2P19784 350 aaPredicted RBP20.03■□□□□ 0.8
LIME1-203ENST00000465591 GPX3P22352 226 aa20.03■□□□□ 0.8
LIME1-203ENST00000465591 HTR1EP28566 365 aa20.03■□□□□ 0.8
LIME1-203ENST00000465591 SERPINB3P29508 390 aa20.03■□□□□ 0.8
LIME1-203ENST00000465591 CCT5P48643 541 aa20.03■□□□□ 0.8
LIME1-203ENST00000465591 FBXW4P57775 412 aa20.03■□□□□ 0.8
LIME1-203ENST00000465591 DNAJB13P59910 316 aa20.03■□□□□ 0.8
LIME1-203ENST00000465591 SLC18A2Q05940 514 aa20.03■□□□□ 0.8
LIME1-203ENST00000465591 BTKQ06187 659 aa20.03■□□□□ 0.8
LIME1-203ENST00000465591 MAP4K2Q12851 820 aa20.03■□□□□ 0.8
LIME1-203ENST00000465591 CCDC153Q494R4 210 aa20.03■□□□□ 0.8
LIME1-203ENST00000465591 BICRALQ6AI39 1079 aa20.03■□□□□ 0.8
LIME1-203ENST00000465591 XKRXQ6PP77 449 aa20.03■□□□□ 0.8
LIME1-203ENST00000465591 RGS9BPQ6ZS82 235 aa20.03■□□□□ 0.8
LIME1-203ENST00000465591 PRR22Q8IZ63 422 aa20.03■□□□□ 0.8
LIME1-203ENST00000465591 VWA5B2Q8N398 1253 aa20.03■□□□□ 0.8
LIME1-203ENST00000465591 FAM109AQ8N4B1 249 aa20.03■□□□□ 0.8
LIME1-203ENST00000465591 PHF10Q8WUB8 498 aaKnown RBP20.03■□□□□ 0.8
LIME1-203ENST00000465591 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.03■□□□□ 0.85e-8■■■■■ 65.3
LIME1-203ENST00000465591 TP53INP1Q96A56 240 aa20.03■□□□□ 0.8
LIME1-203ENST00000465591 FAIM2Q9BWQ8 316 aa20.03■□□□□ 0.8
LIME1-203ENST00000465591 SHCBP1LQ9BZQ2 653 aa20.03■□□□□ 0.8
LIME1-203ENST00000465591 TNFRSF10DQ9UBN6 386 aa20.03■□□□□ 0.8
LIME1-203ENST00000465591 ATP6AP2A0A1C7CYW4 349 aa20.02■□□□□ 0.8
LIME1-203ENST00000465591 SERTM1A2A2V5 107 aa20.02■□□□□ 0.8
LIME1-203ENST00000465591 GOLGA6L10A6NI86 522 aa20.02■□□□□ 0.8
LIME1-203ENST00000465591 COPEO14579 308 aa20.02■□□□□ 0.8
LIME1-203ENST00000465591 ATP6AP2O75787 350 aa20.02■□□□□ 0.8
LIME1-203ENST00000465591 IGHG3P01860 377 aa20.02■□□□□ 0.8
LIME1-203ENST00000465591 PRF1P14222 555 aa20.02■□□□□ 0.8
LIME1-203ENST00000465591 CPA3P15088 417 aa20.02■□□□□ 0.8
LIME1-203ENST00000465591 TIA1P31483 386 aaKnown RBP eCLIP20.02■□□□□ 0.8
LIME1-203ENST00000465591 SMSP52788 366 aa20.02■□□□□ 0.8
LIME1-203ENST00000465591 MRPS35P82673 323 aaKnown RBP20.02■□□□□ 0.8
LIME1-203ENST00000465591 ACSM2AQ08AH3 577 aa20.02■□□□□ 0.8
LIME1-203ENST00000465591 NNATQ16517 81 aa20.02■□□□□ 0.8
LIME1-203ENST00000465591 ZNF630Q2M218 657 aaPredicted RBP20.02■□□□□ 0.8
LIME1-203ENST00000465591 TRMT12Q53H54 448 aaKnown RBP20.02■□□□□ 0.8
LIME1-203ENST00000465591 ACSM2BQ68CK6 577 aa20.02■□□□□ 0.8
LIME1-203ENST00000465591 TRILQ7L0X0 811 aa20.02■□□□□ 0.8
LIME1-203ENST00000465591 TAGAPQ8N103 731 aa20.02■□□□□ 0.8
LIME1-203ENST00000465591 OR7G1Q8NGA0 311 aa20.02■□□□□ 0.8
LIME1-203ENST00000465591 C16orf78Q8WTQ4 265 aa20.02■□□□□ 0.8
LIME1-203ENST00000465591 CTHRC1Q96CG8 243 aa20.02■□□□□ 0.8
LIME1-203ENST00000465591 NXF5Q9H1B4 397 aaKnown RBP20.02■□□□□ 0.8
LIME1-203ENST00000465591 OXSMQ9NWU1 459 aa20.02■□□□□ 0.8
LIME1-203ENST00000465591 UTS2RQ9UKP6 389 aa20.02■□□□□ 0.8
LIME1-203ENST00000465591 NPFFR2Q9Y5X5 522 aa20.02■□□□□ 0.8
LIME1-203ENST00000465591 GNG14A0A1W2PPG7 69 aa20.01■□□□□ 0.79
LIME1-203ENST00000465591 TLDC2A0PJX2 215 aa20.01■□□□□ 0.79
LIME1-203ENST00000465591 NPIPA2E9PIF3 369 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms