RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 ZNF227Q86WZ6 799 aa18.84■□□□□ 0.61
SKA3-205ENST00000465471 ADCY4Q8NFM4 1077 aa18.84■□□□□ 0.61
SKA3-205ENST00000465471 GFM2Q969S9 779 aaKnown RBP18.84■□□□□ 0.61
SKA3-205ENST00000465471 MAELQ96JY0 434 aaKnown RBP18.84■□□□□ 0.61
SKA3-205ENST00000465471 SIGLEC12Q96PQ1 595 aa18.84■□□□□ 0.61
SKA3-205ENST00000465471 UTP23Q9BRU9 249 aaKnown RBP18.84■□□□□ 0.61
SKA3-205ENST00000465471 WWTR1Q9GZV5 400 aa18.84■□□□□ 0.61
SKA3-205ENST00000465471 OR10A5Q9H207 317 aa18.84■□□□□ 0.61
SKA3-205ENST00000465471 LIN28AQ9H9Z2 209 aaKnown RBP18.84■□□□□ 0.61
SKA3-205ENST00000465471 NOP53Q9NZM5 478 aaKnown RBP18.84■□□□□ 0.61
SKA3-205ENST00000465471 ATP6V1HQ9UI12 483 aa18.84■□□□□ 0.61
SKA3-205ENST00000465471 PCDHGB6Q9Y5F9 930 aa18.84■□□□□ 0.61
SKA3-205ENST00000465471 TRPC5OSA6NMA1 111 aa18.83■□□□□ 0.6
SKA3-205ENST00000465471 SCAMP2O15127 329 aaKnown RBP18.83■□□□□ 0.6
SKA3-205ENST00000465471 AKAP10O43572 662 aa18.83■□□□□ 0.6
SKA3-205ENST00000465471 OR2J2O76002 312 aa18.83■□□□□ 0.6
SKA3-205ENST00000465471 NEURL1O76050 574 aa18.83■□□□□ 0.6
SKA3-205ENST00000465471 LRATO95237 230 aa18.83■□□□□ 0.6
SKA3-205ENST00000465471 MPIP34949 423 aa18.83■□□□□ 0.6
SKA3-205ENST00000465471 HLCSP50747 726 aa18.83■□□□□ 0.6
SKA3-205ENST00000465471 RPUSD3Q6P087 351 aaKnown RBP18.83■□□□□ 0.6
SKA3-205ENST00000465471 RIMKLAQ8IXN7 391 aa18.83■□□□□ 0.6
SKA3-205ENST00000465471 FAM9CQ8IZT9 166 aa18.83■□□□□ 0.6
SKA3-205ENST00000465471 OR9A2Q8NGT5 310 aa18.83■□□□□ 0.6
SKA3-205ENST00000465471 DYDC1Q8WWB3 177 aa18.83■□□□□ 0.6
SKA3-205ENST00000465471 AMDHD1Q96NU7 426 aa18.83■□□□□ 0.6
SKA3-205ENST00000465471 BBS4Q96RK4 519 aa18.83■□□□□ 0.6
SKA3-205ENST00000465471 RASL10BQ96S79 203 aa18.83■□□□□ 0.6
SKA3-205ENST00000465471 BRINP2Q9C0B6 783 aa18.83■□□□□ 0.6
SKA3-205ENST00000465471 SLCO1B3Q9NPD5 702 aa18.83■□□□□ 0.6
SKA3-205ENST00000465471 MED4Q9NPJ6 270 aa18.83■□□□□ 0.6
SKA3-205ENST00000465471 RYDENQ9NUL5 291 aaKnown RBP18.83■□□□□ 0.6
SKA3-205ENST00000465471 ANKRD10Q9NXR5 420 aa18.83■□□□□ 0.6
SKA3-205ENST00000465471 LUZP4Q9P127 313 aa18.83■□□□□ 0.6
SKA3-205ENST00000465471 EIF3LQ9Y262 564 aaKnown RBP18.83■□□□□ 0.6
SKA3-205ENST00000465471 WWP2O00308 870 aa18.82■□□□□ 0.6
SKA3-205ENST00000465471 PLOD3O60568 738 aa18.82■□□□□ 0.6
SKA3-205ENST00000465471 ZNF354AO60765 605 aaPredicted RBP18.82■□□□□ 0.6
SKA3-205ENST00000465471 PRAMEF2O60811 474 aa18.82■□□□□ 0.6
SKA3-205ENST00000465471 SLITRK5O94991 958 aa18.82■□□□□ 0.6
SKA3-205ENST00000465471 NADKO95544 446 aaPredicted RBP18.82■□□□□ 0.6
SKA3-205ENST00000465471 IFI6P09912 130 aa18.82■□□□□ 0.6
SKA3-205ENST00000465471 KITP10721 976 aa18.82■□□□□ 0.6
SKA3-205ENST00000465471 G6PDP11413 515 aa18.82■□□□□ 0.6
SKA3-205ENST00000465471 PCSK2P16519 638 aa18.82■□□□□ 0.6
SKA3-205ENST00000465471 LBPP18428 481 aa18.82■□□□□ 0.6
SKA3-205ENST00000465471 NTSP30990 170 aa18.82■□□□□ 0.6
SKA3-205ENST00000465471 ST13P50502 369 aaKnown RBP18.82■□□□□ 0.6
SKA3-205ENST00000465471 SSR4P51571 173 aa18.82■□□□□ 0.6
SKA3-205ENST00000465471 DIO3P55073 304 aa18.82■□□□□ 0.6
SKA3-205ENST00000465471 MRPS35P82673 323 aaKnown RBP18.82■□□□□ 0.6
SKA3-205ENST00000465471 OR1C1Q15619 314 aa18.82■□□□□ 0.6
SKA3-205ENST00000465471 TRMT12Q53H54 448 aaKnown RBP18.82■□□□□ 0.6
SKA3-205ENST00000465471 PIGGQ5H8A4 983 aa18.82■□□□□ 0.6
SKA3-205ENST00000465471 FHL5Q5TD97 284 aa18.82■□□□□ 0.6
SKA3-205ENST00000465471 ANKRD26P1Q6NSI1 321 aa18.82■□□□□ 0.6
SKA3-205ENST00000465471 SLC29A4Q7RTT9 530 aa18.82■□□□□ 0.6
SKA3-205ENST00000465471 R3HCC1LQ7Z5L2 792 aaKnown RBP18.82■□□□□ 0.6
SKA3-205ENST00000465471 SIMC1Q8NDZ2 872 aa18.82■□□□□ 0.6
SKA3-205ENST00000465471 C16orf52Q8NHV5 167 aa18.82■□□□□ 0.6
SKA3-205ENST00000465471 PPCDCQ96CD2 204 aa18.82■□□□□ 0.6
SKA3-205ENST00000465471 SCMH1Q96GD3 660 aa18.82■□□□□ 0.6
SKA3-205ENST00000465471 MAGEB18Q96M61 343 aa18.82■□□□□ 0.6
SKA3-205ENST00000465471 GLIPR2Q9H4G4 154 aa18.82■□□□□ 0.6
SKA3-205ENST00000465471 PDPK1O15530 556 aa18.81■□□□□ 0.6
SKA3-205ENST00000465471 PRPS1L1P21108 318 aa18.81■□□□□ 0.6
SKA3-205ENST00000465471 GPX3P22352 226 aa18.81■□□□□ 0.6
SKA3-205ENST00000465471 HPCAL1P37235 193 aa18.81■□□□□ 0.6
SKA3-205ENST00000465471 RPL3P39023 403 aaKnown RBP18.81■□□□□ 0.6
SKA3-205ENST00000465471 CYB561P49447 251 aa18.81■□□□□ 0.6
SKA3-205ENST00000465471 NCBP2P52298 156 aaKnown RBP eCLIP18.81■□□□□ 0.6
SKA3-205ENST00000465471 EXOSC7Q15024 291 aaKnown RBP18.81■□□□□ 0.6
SKA3-205ENST00000465471 LYPD8Q6UX82 237 aa18.81■□□□□ 0.6
SKA3-205ENST00000465471 PRICKLE2Q7Z3G6 844 aa18.81■□□□□ 0.6
SKA3-205ENST00000465471 GPALPP1Q8IXQ4 340 aa18.81■□□□□ 0.6
SKA3-205ENST00000465471 C17orf47Q8NEP4 570 aa18.81■□□□□ 0.6
SKA3-205ENST00000465471 OR7G2Q8NG99 324 aa18.81■□□□□ 0.6
SKA3-205ENST00000465471 ADIPOR1Q96A54 375 aa18.81■□□□□ 0.6
SKA3-205ENST00000465471 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.81■□□□□ 0.6
SKA3-205ENST00000465471 WDR55Q9H6Y2 383 aaPredicted RBP18.81■□□□□ 0.6
SKA3-205ENST00000465471 LRFN1Q9P244 771 aa18.81■□□□□ 0.6
SKA3-205ENST00000465471 DTX4Q9Y2E6 619 aa18.81■□□□□ 0.6
SKA3-205ENST00000465471 PRRC2CQ9Y520 2896 aaKnown RBP18.81■□□□□ 0.6
SKA3-205ENST00000465471 A0A087WV62 115 aa18.8■□□□□ 0.6
SKA3-205ENST00000465471 PLOD2O00469 737 aa18.8■□□□□ 0.6
SKA3-205ENST00000465471 ANKRD28O15084 1053 aa18.8■□□□□ 0.6
SKA3-205ENST00000465471 SLC28A2O43868 658 aa18.8■□□□□ 0.6
SKA3-205ENST00000465471 ALDOCP09972 364 aaKnown RBP18.8■□□□□ 0.6
SKA3-205ENST00000465471 EPHA3P29320 983 aa18.8■□□□□ 0.6
SKA3-205ENST00000465471 EMDP50402 254 aa18.8■□□□□ 0.6
SKA3-205ENST00000465471 CLDN8P56748 225 aa18.8■□□□□ 0.6
SKA3-205ENST00000465471 INAQ16352 499 aa18.8■□□□□ 0.6
SKA3-205ENST00000465471 SLC9B1Q4ZJI4 515 aa18.8■□□□□ 0.6
SKA3-205ENST00000465471 SPINK14Q6IE38 97 aa18.8■□□□□ 0.6
SKA3-205ENST00000465471 CAMKMTQ7Z624 323 aa18.8■□□□□ 0.6
SKA3-205ENST00000465471 SLC15A4Q8N697 577 aa18.8■□□□□ 0.6
SKA3-205ENST00000465471 KRTCAP2Q8N6L1 136 aa18.8■□□□□ 0.6
SKA3-205ENST00000465471 OR7A2PQ8NGA2 310 aa18.8■□□□□ 0.6
SKA3-205ENST00000465471 OR52R1Q8NGF1 315 aa18.8■□□□□ 0.6
SKA3-205ENST00000465471 KAT2AQ92830 837 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms