RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 CYB561P49447 251 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 SSR4P51571 173 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 NR0B1P51843 470 aaKnown RBP10.8□□□□□ -0.68
CUX1-207ENST00000465461 DIO3P55073 304 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 PMP22Q01453 160 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 MAP4K2Q12851 820 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 EBPQ15125 230 aaKnown RBP10.8□□□□□ -0.68
CUX1-207ENST00000465461 CEBPEQ15744 281 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 NNATQ16517 81 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 ZNF766Q5HY98 468 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 C6orf163Q5TEZ5 329 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 IL20RBQ6UXL0 311 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 IKBIPQ70UQ0 350 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 ZNF551Q7Z340 670 aaPredicted RBP10.8□□□□□ -0.68
CUX1-207ENST00000465461 MAVSQ7Z434 540 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 MDGA2Q7Z553 956 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 LGI4Q8N135 537 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 ARMC10Q8N2F6 343 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 VWA5B2Q8N398 1253 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 TMEM156Q8N614 296 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 MDS2Q8NDY4 140 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 C7orf57Q8NEG2 295 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 OR7A2PQ8NGA2 310 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 OR5L2Q8NGL0 311 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 C16orf52Q8NHV5 167 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 RAB3IL1Q8TBN0 382 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 CPT1CQ8TCG5 803 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 LRRC8CQ8TDW0 803 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 DYDC1Q8WWB3 177 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 PPCDCQ96CD2 204 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 CTHRC1Q96CG8 243 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 ART5Q96L15 291 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 WWTR1Q9GZV5 400 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 RNF32Q9H0A6 362 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 GLIPR2Q9H4G4 154 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 REEP4Q9H6H4 257 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 MEAF6Q9HAF1 191 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 GIMAP4Q9NUV9 329 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 ASF1BQ9NVP2 202 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 EHD3Q9NZN3 535 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 ZNF639Q9UID6 485 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 YARS2Q9Y2Z4 477 aaKnown RBP10.8□□□□□ -0.68
CUX1-207ENST00000465461 BSNQ9UPA5 3926 aa10.8□□□□□ -0.68
CUX1-207ENST00000465461 SMG1Q96Q15 3661 aaKnown RBP10.8□□□□□ -0.68
CUX1-207ENST00000465461 TLN1Q9Y490 2541 aaKnown RBP10.8□□□□□ -0.68
CUX1-207ENST00000465461 TRAV17A0A0B4J275 112 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 C2orf92A0A1B0GVN3 265 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 KLF11O14901 512 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 PRAMEF2O60811 474 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 WISP2O76076 250 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 SNUPNO95149 360 aaKnown RBP10.79□□□□□ -0.68
CUX1-207ENST00000465461 NADKO95544 446 aaPredicted RBP10.79□□□□□ -0.68
CUX1-207ENST00000465461 SP1P08047 785 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 MAPK1P28482 360 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 EPHA3P29320 983 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 HLCSP50747 726 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 NME5P56597 212 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 EMX2Q04743 252 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 HSPB3Q12988 150 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 MAPKAPK3Q16644 382 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 SLC9B1Q4ZJI4 515 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 PIGGQ5H8A4 983 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 TMEM107Q6UX40 140 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 FAM47EQ6ZV65 393 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 LARP4Q71RC2 724 aaKnown RBP eCLIP10.79□□□□□ -0.68
CUX1-207ENST00000465461 SLC29A4Q7RTT9 530 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 GALNTL5Q7Z4T8 443 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 PRR22Q8IZ63 422 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 FAM9CQ8IZT9 166 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 OR7G2Q8NG99 324 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 OR8K3Q8NH51 312 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 NUBPLQ8TB37 319 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 ASB15Q8WXK1 588 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 ADIPOR1Q96A54 375 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 AMDHD1Q96NU7 426 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 TAAR6Q96RI8 345 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 ACBD3Q9H3P7 528 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 ERVK-11Q9UQG0 969 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 EIF3LQ9Y262 564 aaKnown RBP10.79□□□□□ -0.68
CUX1-207ENST00000465461 WBP11Q9Y2W2 641 aaKnown RBP10.79□□□□□ -0.68
CUX1-207ENST00000465461 CNTRLQ7Z7A1 2325 aa10.79□□□□□ -0.68
CUX1-207ENST00000465461 A8MVJ9 347 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 G3V3Y1 287 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 ZNF195O14628 629 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 SCAMP2O15127 329 aaKnown RBP10.78□□□□□ -0.68
CUX1-207ENST00000465461 HDAC3O15379 428 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 SLC25A12O75746 678 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 ALDOCP09972 364 aaKnown RBP10.78□□□□□ -0.68
CUX1-207ENST00000465461 LAMP1P11279 417 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 PRPS2P11908 318 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 LBPP18428 481 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 GPX3P22352 226 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 NTSP30990 170 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 MPIP34949 423 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 TRHRP34981 398 aaPredicted RBP10.78□□□□□ -0.68
CUX1-207ENST00000465461 MC3RP41968 323 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 ASMTP46597 345 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 GPR85P60893 370 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 PDE7AQ13946 482 aa10.78□□□□□ -0.68
CUX1-207ENST00000465461 FHL5Q5TD97 284 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms