RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 MUC22E2RYF6 1773 aaPredicted RBP17.3■□□□□ 0.36
SYNE4-204ENST00000465425 A0A075B6Q4 140 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 IGKV1-8A0A0C4DH67 115 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 ANTXRLA6NF34 631 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 WASHC1A8K0Z3 465 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 MID1O15344 667 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 LATO43561 262 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 PRKRAO75569 313 aaKnown RBP17.3■□□□□ 0.36
SYNE4-204ENST00000465425 KCNK2O95069 426 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 STATHP02808 62 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 DRD3P35462 400 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 TIE1P35590 1138 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 PCYT1AP49585 367 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 ALDH6A1Q02252 535 aaKnown RBP17.3■□□□□ 0.36
SYNE4-204ENST00000465425 CARTPTQ16568 116 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 TMEM35AQ53FP2 167 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 DESI1Q6ICB0 168 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 KIAA1161Q6NSJ0 714 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 WASH2PQ6VEQ5 465 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 ZNF793Q6ZN11 406 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 WDR53Q7Z5U6 358 aaPredicted RBP17.3■□□□□ 0.36
SYNE4-204ENST00000465425 IQCHQ86VS3 1027 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 COMTD1Q86VU5 262 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 PROKR2Q8NFJ6 384 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 TXNDC15Q96J42 360 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 FUZQ9BT04 418 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 C3orf14Q9HBI5 128 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 STUB1Q9UNE7 303 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 NUP210Q8TEM1 1887 aaPredicted RBP17.3■□□□□ 0.36
SYNE4-204ENST00000465425 MN1Q10571 1320 aaPredicted RBP17.29■□□□□ 0.36
SYNE4-204ENST00000465425 LINC01553A4QN01 128 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 GPR89AB7ZAQ6 455 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 ERI3O43414 337 aaKnown RBP17.29■□□□□ 0.36
SYNE4-204ENST00000465425 POU2F2P09086 479 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 GPR89BP0CG08 455 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 MMP11P24347 488 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 TAS2R38P59533 333 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 LASP1Q14847 261 aaKnown RBP17.29■□□□□ 0.36
SYNE4-204ENST00000465425 GPR19Q15760 415 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 MLF2Q15773 248 aaPredicted RBP17.29■□□□□ 0.36
SYNE4-204ENST00000465425 OLIG3Q7RTU3 272 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 HMGN2P46Q86SG4 172 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 NANOGP1Q8N7R0 232 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 OR6T1Q8NGN1 323 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 OR2A1Q8NGT9 310 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 SLC6A18Q96N87 628 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 CCDC32Q9BV29 185 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 TEX101Q9BY14 249 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 POLDIP3Q9BY77 421 aaKnown RBP17.29■□□□□ 0.36
SYNE4-204ENST00000465425 SMURF1Q9HCE7 757 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 MRPS30Q9NP92 439 aaKnown RBP17.29■□□□□ 0.36
SYNE4-204ENST00000465425 THAP10Q9P2Z0 257 aaPredicted RBP17.29■□□□□ 0.36
SYNE4-204ENST00000465425 HCN2Q9UL51 889 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 MAN2B1O00754 1011 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 PRKYO43930 277 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 ENDOUP21128 410 aaKnown RBP17.29■□□□□ 0.36
SYNE4-204ENST00000465425 RPS19P39019 145 aaKnown RBP17.29■□□□□ 0.36
SYNE4-204ENST00000465425 RORCP51449 518 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 RUNX1T1Q06455 604 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 SLAMF1Q13291 335 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 GINS1Q14691 196 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 GPAT3Q53EU6 434 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 ZER1Q7Z7L7 766 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 IL17RCQ8NAC3 791 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 TP53I13Q8NBR0 393 aaPredicted RBP17.29■□□□□ 0.36
SYNE4-204ENST00000465425 SUN3Q8TAQ9 357 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 CAMK1GQ96NX5 476 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 KLHL31Q9H511 634 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 CTPS2Q9NRF8 586 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 NDUFB11Q9NX14 153 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 ERVK13-1Q9NX77 482 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 SSR3Q9UNL2 185 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 KCNK6Q9Y257 313 aa17.29■□□□□ 0.36
SYNE4-204ENST00000465425 ASNA1O43681 348 aa17.28■□□□□ 0.36
SYNE4-204ENST00000465425 GUCY1B2O75343 617 aa17.28■□□□□ 0.36
SYNE4-204ENST00000465425 HBQ1P09105 142 aa17.28■□□□□ 0.36
SYNE4-204ENST00000465425 ALPPL2P10696 532 aa17.28■□□□□ 0.36
SYNE4-204ENST00000465425 PTGER1P34995 402 aa17.28■□□□□ 0.36
SYNE4-204ENST00000465425 MLLT11Q13015 90 aaPredicted RBP17.28■□□□□ 0.36
SYNE4-204ENST00000465425 SELENBP1Q13228 472 aa17.28■□□□□ 0.36
SYNE4-204ENST00000465425 AGBL4Q5VU57 503 aa17.28■□□□□ 0.36
SYNE4-204ENST00000465425 LIPKQ5VXJ0 399 aa17.28■□□□□ 0.36
SYNE4-204ENST00000465425 CCBE1Q6UXH8 406 aaPredicted RBP17.28■□□□□ 0.36
SYNE4-204ENST00000465425 CD300LDQ6UXZ3 194 aa17.28■□□□□ 0.36
SYNE4-204ENST00000465425 FAM26EQ8N5C1 309 aa17.28■□□□□ 0.36
SYNE4-204ENST00000465425 OR8K5Q8NH50 307 aa17.28■□□□□ 0.36
SYNE4-204ENST00000465425 LRR1Q96L50 414 aa17.28■□□□□ 0.36
SYNE4-204ENST00000465425 PRRC1Q96M27 445 aa17.28■□□□□ 0.36
SYNE4-204ENST00000465425 MACROD1Q9BQ69 325 aa17.28■□□□□ 0.36
SYNE4-204ENST00000465425 RAB11FIP5Q9BXF6 653 aa17.28■□□□□ 0.36
SYNE4-204ENST00000465425 BCL2L10Q9HD36 194 aa17.28■□□□□ 0.36
SYNE4-204ENST00000465425 ENTPD4Q9Y227 616 aa17.28■□□□□ 0.36
SYNE4-204ENST00000465425 TRPM6Q9BX84 2022 aa17.28■□□□□ 0.36
SYNE4-204ENST00000465425 RAB36O95755 333 aa17.27■□□□□ 0.36
SYNE4-204ENST00000465425 LGI1O95970 557 aa17.27■□□□□ 0.36
SYNE4-204ENST00000465425 PAK4O96013 591 aaPredicted RBP17.27■□□□□ 0.36
SYNE4-204ENST00000465425 TP53P04637 393 aaPredicted RBP17.27■□□□□ 0.36
SYNE4-204ENST00000465425 HMGN2P05204 90 aaKnown RBP17.27■□□□□ 0.36
SYNE4-204ENST00000465425 CHRM4P08173 479 aa17.27■□□□□ 0.36
SYNE4-204ENST00000465425 SPNP16150 400 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms