RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 ITPR2Q14571 2701 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 POLEQ07864 2286 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 IGKV3D-11A0A0A0MRZ8 115 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 GLOD5A6NK44 160 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 ENO4A6NNW6 628 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 SCAMP2O15127 329 aaKnown RBP16.27■□□□□ 0.2
CPSF4-209ENST00000465132 DNAJB6O75190 326 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 JRKO75564 520 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 FAM107AO95990 144 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 IL6P05231 212 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 MAOAP21397 527 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 TACR1P25103 407 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 ADSLP30566 484 aaPredicted RBP16.27■□□□□ 0.2
CPSF4-209ENST00000465132 STT3AP46977 705 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 DIO3P55073 304 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 IGLV3-21P80748 117 aaPredicted RBP16.27■□□□□ 0.2
CPSF4-209ENST00000465132 Q0VFX4 171 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 PTGR1Q14914 329 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 TLR1Q15399 786 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 ELAVL1Q15717 326 aaKnown RBP16.27■□□□□ 0.2
CPSF4-209ENST00000465132 EXT1Q16394 746 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 ANXA8L1Q5VT79 327 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 NDUFAF7Q7L592 441 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 CPEB2Q7Z5Q1 589 aaKnown RBP16.27■□□□□ 0.2
CPSF4-209ENST00000465132 CLNKQ7Z7G1 428 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 LAPTM4BQ86VI4 370 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 TICAM1Q8IUC6 712 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 LRRC25Q8N386 305 aaPredicted RBP16.27■□□□□ 0.2
CPSF4-209ENST00000465132 ANKS4BQ8N8V4 417 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 OR14A16Q8NHC5 309 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 ZBED6CLQ96FA7 236 aaPredicted RBP16.27■□□□□ 0.2
CPSF4-209ENST00000465132 THOC3Q96J01 351 aaKnown RBP16.27■□□□□ 0.2
CPSF4-209ENST00000465132 BHLHE41Q9C0J9 482 aaPredicted RBP16.27■□□□□ 0.2
CPSF4-209ENST00000465132 EPS8L2Q9H6S3 715 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 KCNK13Q9HB14 408 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 SDR39U1Q9NRG7 319 aaPredicted RBP16.27■□□□□ 0.2
CPSF4-209ENST00000465132 SH3BP4Q9P0V3 963 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 PCDHGB4Q9UN71 923 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 GPR45Q9Y5Y3 372 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 SCN2AQ99250 2005 aa16.27■□□□□ 0.2
CPSF4-209ENST00000465132 CREBBPQ92793 2442 aa16.27■□□□□ 0.19
CPSF4-209ENST00000465132 LOC102723996A0A087X1L8 192 aa16.26■□□□□ 0.19
CPSF4-209ENST00000465132 A0A1W2PQ72 361 aa16.26■□□□□ 0.19
CPSF4-209ENST00000465132 PGRMC2O15173 223 aa16.26■□□□□ 0.19
CPSF4-209ENST00000465132 SLC22A2O15244 555 aa16.26■□□□□ 0.19
CPSF4-209ENST00000465132 PDPK1O15530 556 aa16.26■□□□□ 0.19
CPSF4-209ENST00000465132 AKAP10O43572 662 aa16.26■□□□□ 0.19
CPSF4-209ENST00000465132 SNX3O60493 162 aa16.26■□□□□ 0.19
CPSF4-209ENST00000465132 LDB3O75112 727 aa16.26■□□□□ 0.19
CPSF4-209ENST00000465132 EDN3P14138 238 aa16.26■□□□□ 0.19
CPSF4-209ENST00000465132 CPMP14384 443 aa16.26■□□□□ 0.19
CPSF4-209ENST00000465132 DRD4P21917 467 aa16.26■□□□□ 0.19
CPSF4-209ENST00000465132 BTG2P78543 158 aa16.26■□□□□ 0.19
CPSF4-209ENST00000465132 PDE7AQ13946 482 aa16.26■□□□□ 0.19
CPSF4-209ENST00000465132 FAM219BQ5XKK7 198 aa16.26■□□□□ 0.19
CPSF4-209ENST00000465132 ISLR2Q6UXK2 745 aa16.26■□□□□ 0.19
CPSF4-209ENST00000465132 CAMKMTQ7Z624 323 aa16.26■□□□□ 0.19
CPSF4-209ENST00000465132 ANKRD37Q7Z713 158 aa16.26■□□□□ 0.19
CPSF4-209ENST00000465132 CLHC1Q8NHS4 586 aa16.26■□□□□ 0.19
CPSF4-209ENST00000465132 FAR1Q8WVX9 515 aa16.26■□□□□ 0.19
CPSF4-209ENST00000465132 EXOSC8Q96B26 276 aaKnown RBP16.26■□□□□ 0.19
CPSF4-209ENST00000465132 ERP27Q96DN0 273 aa16.26■□□□□ 0.19
CPSF4-209ENST00000465132 EGLN2Q96KS0 407 aa16.26■□□□□ 0.19
CPSF4-209ENST00000465132 MESP1Q9BRJ9 268 aa16.26■□□□□ 0.19
CPSF4-209ENST00000465132 ACSS1Q9NUB1 689 aaPredicted RBP16.26■□□□□ 0.19
CPSF4-209ENST00000465132 RYDENQ9NUL5 291 aaKnown RBP16.26■□□□□ 0.19
CPSF4-209ENST00000465132 CES1P1Q9UKY3 287 aa16.26■□□□□ 0.19
CPSF4-209ENST00000465132 OSGIN2Q9Y236 505 aa16.26■□□□□ 0.19
CPSF4-209ENST00000465132 NSG1A0A0A6YYJ2 146 aa16.25■□□□□ 0.19
CPSF4-209ENST00000465132 LRRTM2O43300 516 aa16.25■□□□□ 0.19
CPSF4-209ENST00000465132 FGF17O60258 216 aa16.25■□□□□ 0.19
CPSF4-209ENST00000465132 BCAS2O75934 225 aaPredicted RBP16.25■□□□□ 0.19
CPSF4-209ENST00000465132 LRATO95237 230 aa16.25■□□□□ 0.19
CPSF4-209ENST00000465132 HPP00738 406 aa16.25■□□□□ 0.19
CPSF4-209ENST00000465132 ATP1B1P05026 303 aa16.25■□□□□ 0.19
CPSF4-209ENST00000465132 IFI6P09912 130 aa16.25■□□□□ 0.19
CPSF4-209ENST00000465132 ALDOCP09972 364 aaKnown RBP16.25■□□□□ 0.19
CPSF4-209ENST00000465132 KIR3DL1P43629 444 aa16.25■□□□□ 0.19
CPSF4-209ENST00000465132 PER3P56645 1201 aa16.25■□□□□ 0.19
CPSF4-209ENST00000465132 MFAP5Q13361 173 aa16.25■□□□□ 0.19
CPSF4-209ENST00000465132 MAPRE2Q15555 327 aa16.25■□□□□ 0.19
CPSF4-209ENST00000465132 SFT2D3Q587I9 215 aa16.25■□□□□ 0.19
CPSF4-209ENST00000465132 LINC00696Q6ZRV3 163 aa16.25■□□□□ 0.19
CPSF4-209ENST00000465132 MORN4Q8NDC4 146 aa16.25■□□□□ 0.19
CPSF4-209ENST00000465132 GFM2Q969S9 779 aaKnown RBP16.25■□□□□ 0.19
CPSF4-209ENST00000465132 ANKRD9Q96BM1 317 aaPredicted RBP16.25■□□□□ 0.19
CPSF4-209ENST00000465132 COQ8BQ96D53 544 aa16.25■□□□□ 0.19
CPSF4-209ENST00000465132 LMF1Q96S06 567 aa16.25■□□□□ 0.19
CPSF4-209ENST00000465132 CCT8L2Q96SF2 557 aa16.25■□□□□ 0.19
CPSF4-209ENST00000465132 ZNF700Q9H0M5 742 aa16.25■□□□□ 0.19
CPSF4-209ENST00000465132 NECTIN3Q9NQS3 549 aa16.25■□□□□ 0.19
CPSF4-209ENST00000465132 PNO1Q9NRX1 252 aaKnown RBP16.25■□□□□ 0.19
CPSF4-209ENST00000465132 HEY2Q9UBP5 337 aa16.25■□□□□ 0.19
CPSF4-209ENST00000465132 COPS7AQ9UBW8 275 aa16.25■□□□□ 0.19
CPSF4-209ENST00000465132 ARL2BPQ9Y2Y0 163 aa16.25■□□□□ 0.19
CPSF4-209ENST00000465132 CENPEQ02224 2701 aa16.25■□□□□ 0.19
CPSF4-209ENST00000465132 GABRR3A8MPY1 467 aa16.24■□□□□ 0.19
CPSF4-209ENST00000465132 DCTN3O75935 186 aa16.24■□□□□ 0.19
CPSF4-209ENST00000465132 S100A3P33764 101 aa16.24■□□□□ 0.19
CPSF4-209ENST00000465132 HNRNPFP52597 415 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms