RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 RDH11Q8TC12 318 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 FBXO25Q8TCJ0 367 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 U2AF1L4Q8WU68 220 aaKnown RBP1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 TMEM37Q8WXS4 190 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 TMEM45BQ96B21 275 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 C14orf79Q96F83 325 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 WBP1Q96G27 269 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 C16orf58Q96GQ5 468 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 COG3Q96JB2 828 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 ANKRD27Q96NW4 1050 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 SOSTQ9BQB4 213 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 XPO4Q9C0E2 1151 aaKnown RBP1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 ATG10Q9H0Y0 220 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 SIRPDQ9H106 197 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 ADNPQ9H2P0 1102 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 FAM124BQ9H5Z6 455 aaPredicted RBP1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 HPS4Q9NQG7 708 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 HOMER3Q9NSC5 361 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 CNOT2Q9NZN8 540 aaKnown RBP1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 ZNF581Q9P0T4 197 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 ERVK-18Q9QC07 812 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 MIOXQ9UGB7 285 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 CIDEBQ9UHD4 219 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 MOSPD1Q9UJG1 213 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 EMCNQ9ULC0 261 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 PIN4Q9Y237 131 aaKnown RBP1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 SLC6A5Q9Y345 797 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 MOB4Q9Y3A3 225 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 FBXO7Q9Y3I1 522 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 RPGRIP1LQ68CZ1 1315 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 TDRD15B5MCY1 1934 aaKnown RBP1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 NPIPA5A0A0B4J1W7 369 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 TEX48A0A1B0GUV7 120 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 SYCE3A1L190 88 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 FOXI3A8MTJ6 420 aaPredicted RBP1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 SHISA9B4DS77 424 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 NPIPA5E9PKD4 350 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 BCL2L11O43521 198 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 BUB1O43683 1085 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 PRPSAP2O60256 369 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 GALR3O60755 368 aaPredicted RBP1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 ATP6V1G1O75348 118 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 VENTXO95231 258 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 MT-ND1P03886 318 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 HOXB7P09629 217 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 OR9G9P0C7N8 305 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 ZCCHC18P0CG32 403 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 MBL2P11226 248 aaPredicted RBP1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 ETS1P14921 441 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 EZRP15311 586 aaKnown RBP1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 FUT1P19526 365 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 CCNA2P20248 432 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 ZNF10P21506 573 aaPredicted RBP1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 IGFBP5P24593 272 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 DNAJB1P25685 340 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 SFNP31947 248 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 ATP6V1E1P36543 226 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 ELK3P41970 407 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 PTGER3P43115 390 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 NPY2RP49146 381 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 ATXN3P54252 364 aaPredicted RBP1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 PEX3P56589 373 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 NLRP11P59045 1033 aaKnown RBP1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 BPIFB3P59826 476 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 MS4A2Q01362 244 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 GALK2Q01415 458 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 IL1RL1Q01638 556 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 ZNF85Q03923 595 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 COX10Q12887 443 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 CYLC2Q14093 348 aaPredicted RBP1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 PDIA5Q14554 519 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 EMC2Q15006 297 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 TRADDQ15628 312 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 ZKSCAN8Q15776 578 aaPredicted RBP1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 AGKQ53H12 422 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 NHLRC3Q5JS37 347 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 TOR1AIP1Q5JTV8 583 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 AGAP7PQ5VUJ5 663 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 TAF3Q5VWG9 929 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 OR6B2Q6IFH4 312 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 ARMCX5Q6P1M9 558 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 LEG1Q6P5S2 330 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 CNSTQ6PJW8 725 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 WDR88Q6ZMY6 472 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 DPY19L2P2Q6ZN68 376 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 STOX1Q6ZVD7 989 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 PAQR9Q6ZVX9 377 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 MOB2Q70IA6 237 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 ASRGL1Q7L266 308 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 BNIPLQ7Z465 357 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 TAF8Q7Z7C8 310 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 RANBP3LQ86VV4 465 aaPredicted RBP1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 CATSPER3Q86XQ3 398 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 LRRC17Q8N6Y2 441 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 POM121L12Q8N7R1 296 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 FAM71CQ8NEG0 241 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 NEK11Q8NG66 645 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 FAM222BQ8WU58 562 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 DLX4Q92988 240 aaPredicted RBP1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 CCDC47Q96A33 483 aaKnown RBP1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms