RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 MYBPC1Q00872 1141 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 CD300CQ08708 224 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 FCHO2Q0JRZ9 810 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 SMC1AQ14683 1233 aaKnown RBP3.33□□□□□ -1.88
CLK1-208ENST00000464454 SIX1Q15475 284 aaPredicted RBP3.33□□□□□ -1.88
CLK1-208ENST00000464454 HKDC1Q2TB90 917 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 IL23RQ5VWK5 629 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 FAM159AQ6UWV7 190 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 GPRIN3Q6ZVF9 776 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 ADGRD2Q7Z7M1 963 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 ABHD12Q8N2K0 398 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 C4orf32Q8N8J7 132 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 MLKLQ8NB16 471 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 ANKRD20A12PQ8NF67 263 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 OR4F5Q8NH21 305 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 PHYHIPQ92561 330 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 C14orf79Q96F83 325 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 ZNF597Q96LX8 424 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 DEFB118Q96PH6 123 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 ACCSQ96QU6 501 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 PSMB7Q99436 277 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 LRRCC1Q9C099 1032 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 HEXA-AS1Q9H8Q6 139 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 JPT2Q9H910 190 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 Q9HAA7 133 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 ELL3Q9HB65 397 aaPredicted RBP3.33□□□□□ -1.88
CLK1-208ENST00000464454 CNOT2Q9NZN8 540 aaKnown RBP3.33□□□□□ -1.88
CLK1-208ENST00000464454 CLIP2Q9UDT6 1046 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.33□□□□□ -1.88
CLK1-208ENST00000464454 FBXO7Q9Y3I1 522 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 ZNF175Q9Y473 711 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 MTF2Q9Y483 593 aaPredicted RBP3.33□□□□□ -1.88
CLK1-208ENST00000464454 CSAG2Q9Y5P2 127 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 FAM205AQ6ZU69 1335 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 SALL1Q9NSC2 1324 aa3.33□□□□□ -1.88
CLK1-208ENST00000464454 FER1L5A0AVI2 2057 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 TXNL1O43396 289 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 IGHV3-13P01766 116 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 OR9G9P0C7N8 305 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 RALAP11233 206 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 GP9P14770 177 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 FOSL2P15408 326 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 LMO2P25791 158 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 PPP2R1BP30154 601 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 AKT2P31751 481 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 HSPA1LP34931 641 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 MAGEA4P43358 317 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 PGFP49763 221 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 BPIFB3P59826 476 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 ACY1Q03154 408 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 INAQ16352 499 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 AGKQ53H12 422 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 TCHHL1Q5QJ38 904 aaPredicted RBP3.32□□□□□ -1.88
CLK1-208ENST00000464454 ZNF343Q6P1L6 599 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 TMEM26Q6ZUK4 368 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 CCDC71Q8IV32 467 aaPredicted RBP3.32□□□□□ -1.88
CLK1-208ENST00000464454 Q8N377 158 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 ZNRF1Q8ND25 227 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 C17orf47Q8NEP4 570 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 BEST4Q8NFU0 473 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 SAMD8Q96LT4 415 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 KCNK16Q96T55 309 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 C19orf43Q9BQ61 176 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 RAB17Q9H0T7 212 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 LIME1Q9H400 295 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 TMEM231Q9H6L2 316 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 SEC14L4Q9UDX3 406 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 CIDEBQ9UHD4 219 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 SPATA2Q9UM82 520 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 PLA2G4CQ9UP65 541 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 SLC9A8Q9Y2E8 581 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 KLHDC2Q9Y2U9 406 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 CPQQ9Y646 472 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 ZMYM6O95789 1325 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 PCNX3Q9H6A9 2034 aa3.32□□□□□ -1.88
CLK1-208ENST00000464454 SYNJ2O15056 1496 aa3.31□□□□□ -1.88
CLK1-208ENST00000464454 BUB1O43683 1085 aa3.31□□□□□ -1.88
CLK1-208ENST00000464454 RPA1P27694 616 aa3.31□□□□□ -1.88
CLK1-208ENST00000464454 PRDX6P30041 224 aa3.31□□□□□ -1.88
CLK1-208ENST00000464454 PRELPP51888 382 aa3.31□□□□□ -1.88
CLK1-208ENST00000464454 SLC26A5P58743 744 aa3.31□□□□□ -1.88
CLK1-208ENST00000464454 DSCR10P59022 87 aa3.31□□□□□ -1.88
CLK1-208ENST00000464454 GMFBP60983 142 aa3.31□□□□□ -1.88
CLK1-208ENST00000464454 SNX1Q13596 522 aa3.31□□□□□ -1.88
CLK1-208ENST00000464454 KARSQ15046 597 aaKnown RBP3.31□□□□□ -1.88
CLK1-208ENST00000464454 ZNF528Q3MIS6 628 aa3.31□□□□□ -1.88
CLK1-208ENST00000464454 UNC50Q53HI1 259 aa3.31□□□□□ -1.88
CLK1-208ENST00000464454 C9orf66Q5T8R8 295 aa3.31□□□□□ -1.88
CLK1-208ENST00000464454 WDR25Q64LD2 544 aaPredicted RBP3.31□□□□□ -1.88
CLK1-208ENST00000464454 EMBQ6PCB8 327 aa3.31□□□□□ -1.88
CLK1-208ENST00000464454 DPY19L2P2Q6ZN68 376 aa3.31□□□□□ -1.88
CLK1-208ENST00000464454 TMUB2Q71RG4 321 aa3.31□□□□□ -1.88
CLK1-208ENST00000464454 LUZP1Q86V48 1076 aa3.31□□□□□ -1.88
CLK1-208ENST00000464454 ERC1Q8IUD2 1116 aa3.31□□□□□ -1.88
CLK1-208ENST00000464454 PYROXD2Q8N2H3 581 aa3.31□□□□□ -1.88
CLK1-208ENST00000464454 RNF148Q8N7C7 305 aa3.31□□□□□ -1.88
CLK1-208ENST00000464454 FAM71CQ8NEG0 241 aa3.31□□□□□ -1.88
CLK1-208ENST00000464454 MRPL38Q96DV4 380 aaKnown RBP3.31□□□□□ -1.88
CLK1-208ENST00000464454 SOSTQ9BQB4 213 aa3.31□□□□□ -1.88
CLK1-208ENST00000464454 NDUFAF3Q9BU61 184 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms