RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 DOHHQ9BU89 302 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 MRPL1Q9BYD6 325 aaKnown RBP13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 EXO5Q9H790 373 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 BRF2Q9HAW0 419 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 NMRK1Q9NWW6 199 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 KCNN3Q9UGI6 736 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 NPFFR2Q9Y5X5 522 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 NINQ8N4C6 2090 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 A0A087WUV0 522 aaPredicted RBP13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 C1orf226A1L170 272 aa13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 TRIM49D1C9J1S8 452 aa13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 SNX4O95219 450 aa13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 SNRPAP09012 282 aaKnown RBP13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 PORP16435 677 aaPredicted RBP13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 ECHS1P30084 290 aa13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 MAPK12P53778 367 aa13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 NRG3P56975 720 aa13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 RPP38P78345 283 aaKnown RBP13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 SLC25A35Q3KQZ1 300 aa13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 RIPPLY2Q5TAB7 128 aa13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 C6orf163Q5TEZ5 329 aa13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 TMEM198Q66K66 360 aa13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 CLYBLQ8N0X4 340 aa13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 TMEM151AQ8N4L1 468 aa13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 NOA1Q8NC60 698 aaKnown RBP13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 SPPL2AQ8TCT8 520 aa13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 DIO2Q92813 273 aa13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 ADIPOR1Q96A54 375 aa13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 ZNF597Q96LX8 424 aa13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 ANGPTL4Q9BY76 406 aa13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 OR10A5Q9H207 317 aa13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 SPRR3Q9UBC9 169 aa13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 TNFRSF10DQ9UBN6 386 aa13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 CES1P1Q9UKY3 287 aa13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 SNX6Q9UNH7 406 aa13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 CFL2Q9Y281 166 aa13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 PCDHA9Q9Y5H5 950 aa13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 MTORP42345 2549 aa13.19□□□□□ -0.3
SNRNP40-203ENST00000463988 A0A0G2JNJ9 132 aa13.18□□□□□ -0.3
SNRNP40-203ENST00000463988 A0A1W2PS29 197 aa13.18□□□□□ -0.3
SNRNP40-203ENST00000463988 GOLGA6L10A6NI86 522 aa13.18□□□□□ -0.3
SNRNP40-203ENST00000463988 POC1B-GALNT4F8VUJ3 575 aa13.18□□□□□ -0.3
SNRNP40-203ENST00000463988 CDH16O75309 829 aa13.18□□□□□ -0.3
SNRNP40-203ENST00000463988 SBK3P0C264 359 aa13.18□□□□□ -0.3
SNRNP40-203ENST00000463988 CT62P0C5K7 136 aa13.18□□□□□ -0.3
SNRNP40-203ENST00000463988 NAGAP17050 411 aa13.18□□□□□ -0.3
SNRNP40-203ENST00000463988 S1PR1P21453 382 aa13.18□□□□□ -0.3
SNRNP40-203ENST00000463988 GALNT1Q10472 559 aaPredicted RBP13.18□□□□□ -0.3
SNRNP40-203ENST00000463988 MAP4K2Q12851 820 aa13.18□□□□□ -0.3
SNRNP40-203ENST00000463988 SGO1Q5FBB7 561 aa13.18□□□□□ -0.3
SNRNP40-203ENST00000463988 LGSNQ5TDP6 509 aa13.18□□□□□ -0.3
SNRNP40-203ENST00000463988 SLC48A1Q6P1K1 146 aa13.18□□□□□ -0.3
SNRNP40-203ENST00000463988 TIFABQ6ZNK6 161 aa13.18□□□□□ -0.3
SNRNP40-203ENST00000463988 COMMD6Q7Z4G1 85 aa13.18□□□□□ -0.3
SNRNP40-203ENST00000463988 CDH24Q86UP0 819 aa13.18□□□□□ -0.3
SNRNP40-203ENST00000463988 LCA5Q86VQ0 697 aa13.18□□□□□ -0.3
SNRNP40-203ENST00000463988 LIX1Q8N485 282 aa13.18□□□□□ -0.3
SNRNP40-203ENST00000463988 NTNG2Q96CW9 530 aa13.18□□□□□ -0.3
SNRNP40-203ENST00000463988 Q9UFV3 132 aa13.18□□□□□ -0.3
SNRNP40-203ENST00000463988 TRPS1Q9UHF7 1281 aa13.18□□□□□ -0.3
SNRNP40-203ENST00000463988 PSME2Q9UL46 239 aa13.18□□□□□ -0.3
SNRNP40-203ENST00000463988 SLC12A4Q9UP95 1085 aa13.18□□□□□ -0.3
SNRNP40-203ENST00000463988 A0A1B0GTL3 188 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 A8MT66 165 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 AHRRA9YTQ3 701 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 PDYNP01213 254 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 ATP1B1P05026 303 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 ABHD2P08910 425 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 CTAGE8P0CG41 777 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 CSNK2A2P19784 350 aaPredicted RBP13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 NT5EP21589 574 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 GPX3P22352 226 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 GDF1P27539 372 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 DEKP35659 375 aaKnown RBP13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 ADH7P40394 386 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 FBXW4P57775 412 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 TRA2BP62995 288 aaKnown RBP13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 MGAT2Q10469 447 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 TESK1Q15569 626 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 LETMD1Q6P1Q0 360 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 TMEM81Q6P7N7 255 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 TMEM64Q6YI46 380 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 PACS2Q86VP3 889 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 CTAGE4Q8IX94 777 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 ULK2Q8IYT8 1036 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 CNPY4Q8N129 248 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 VWA5B2Q8N398 1253 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 SELENOMQ8WWX9 145 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 MTBPQ96DY7 904 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 JSRP1Q96MG2 331 aaPredicted RBP13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 RILPQ96NA2 401 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 ZNF559Q9BR84 538 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 SLC6A15Q9H2J7 730 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 UBQLN3Q9H347 655 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 FARSBQ9NSD9 589 aaKnown RBP13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 ALKBH4Q9NXW9 302 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 ZNF639Q9UID6 485 aa13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 SETD2Q9BYW2 2564 aaPredicted RBP13.17□□□□□ -0.3
SNRNP40-203ENST00000463988 EXOC1LA0A1B0GW35 172 aa13.16□□□□□ -0.3
SNRNP40-203ENST00000463988 HSPB2A8KAH6 182 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms