RNA–Protein interactions for RNA: ENST00000463685.1

ABCF3-204, Transcript of ATP binding cassette subfamily F member 3, human

TSL 2

Gene ABCF3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-204	ENST00000463685	DDAH2	O95865	285 aa		13.98	□□□□□ -0.17
ABCF3-204	ENST00000463685	ADRB1	P08588	477 aa		13.98	□□□□□ -0.17
ABCF3-204	ENST00000463685	CD63	P08962	238 aa		13.98	□□□□□ -0.17
ABCF3-204	ENST00000463685	S1PR1	P21453	382 aa		13.98	□□□□□ -0.17
ABCF3-204	ENST00000463685	UQCRC2	P22695	453 aa		13.98	□□□□□ -0.17
ABCF3-204	ENST00000463685	CHI3L1	P36222	383 aa	Predicted RBP	13.98	□□□□□ -0.17
ABCF3-204	ENST00000463685	CCT3	P49368	545 aa	Known RBP	13.98	□□□□□ -0.17
ABCF3-204	ENST00000463685	MTPN	P58546	118 aa		13.98	□□□□□ -0.17
ABCF3-204	ENST00000463685	PSME3	P61289	254 aa		13.98	□□□□□ -0.17
ABCF3-204	ENST00000463685	NCALD	P61601	193 aa		13.98	□□□□□ -0.17
ABCF3-204	ENST00000463685	LRRC74A	Q0VAA2	488 aa		13.98	□□□□□ -0.17
ABCF3-204	ENST00000463685	MAP4K2	Q12851	820 aa		13.98	□□□□□ -0.17
ABCF3-204	ENST00000463685	ELAVL1	Q15717	326 aa	Known RBP	13.98	□□□□□ -0.17
ABCF3-204	ENST00000463685	VWA5B2	Q8N398	1253 aa		13.98	□□□□□ -0.17
ABCF3-204	ENST00000463685	PSMA8	Q8TAA3	256 aa		13.98	□□□□□ -0.17
ABCF3-204	ENST00000463685	ZNF675	Q8TD23	568 aa		13.98	□□□□□ -0.17
ABCF3-204	ENST00000463685	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	13.98	□□□□□ -0.17
ABCF3-204	ENST00000463685	CPPED1	Q9BRF8	314 aa	Predicted RBP	13.98	□□□□□ -0.17
ABCF3-204	ENST00000463685	PELO	Q9BRX2	385 aa	Known RBP	13.98	□□□□□ -0.17
ABCF3-204	ENST00000463685	IKZF5	Q9H5V7	419 aa		13.98	□□□□□ -0.17
ABCF3-204	ENST00000463685	NEUROD4	Q9HD90	331 aa		13.98	□□□□□ -0.17
ABCF3-204	ENST00000463685	GMPR2	Q9P2T1	348 aa	Known RBP	13.98	□□□□□ -0.17
ABCF3-204	ENST00000463685	CLCA3P	Q9Y6N3	262 aa		13.98	□□□□□ -0.17
ABCF3-204	ENST00000463685	ASPM	Q8IZT6	3477 aa		13.98	□□□□□ -0.17
ABCF3-204	ENST00000463685	UPK1A	O00322	258 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	PLOD2	O00469	737 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	EMC8	O43402	210 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	CBX7	O95931	251 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	CLPS	P04118	112 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	KRT16	P08779	473 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	ZCCHC18	P0CG32	403 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	WT1	P19544	449 aa	Predicted RBP	13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	MMP11	P24347	488 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	MNAT1	P51948	309 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	RPS26	P62854	115 aa	Known RBP	13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	BIK	Q13323	160 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	TP53BP2	Q13625	1128 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	PCOLCE	Q15113	449 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	RUNDC3A	Q59EK9	446 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	RABL3	Q5HYI8	236 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	ATP1A1-AS1	Q5TC04	95 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	C6orf163	Q5TEZ5	329 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	C8orf82	Q6P1X6	216 aa	Predicted RBP	13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	PAPD4	Q6PIY7	484 aa	Known RBP	13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	KIRREL2	Q6UWL6	708 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	HACD2	Q6Y1H2	254 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	WDR53	Q7Z5U6	358 aa	Predicted RBP	13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	NUP43	Q8NFH3	380 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	OR52R1	Q8NGF1	315 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	OR14A16	Q8NHC5	309 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	FBXO30	Q8TB52	745 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	SLC2A12	Q8TD20	617 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	ZFP90	Q8TF47	636 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	KIAA1143	Q96AT1	154 aa	Predicted RBP	13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	ROPN1L	Q96C74	230 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	CTHRC1	Q96CG8	243 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	OTUB1	Q96FW1	271 aa	Predicted RBP	13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	C16orf58	Q96GQ5	468 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	SENP5	Q96HI0	755 aa	Predicted RBP	13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	ANKRD27	Q96NW4	1050 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	PHF12	Q96QT6	1004 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	GPATCH1	Q9BRR8	931 aa	Known RBP	13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	YIPF4	Q9BSR8	244 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	NUDT9	Q9BW91	350 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	OR8D2	Q9GZM6	311 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	EPS8L2	Q9H6S3	715 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	EQTN	Q9NQ60	294 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	ZCCHC3	Q9NUD5	404 aa	Known RBP	13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	DDX18	Q9NVP1	670 aa	Known RBP	13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	TAS2R1	Q9NYW7	299 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	C19orf25	Q9UFG5	118 aa	Predicted RBP	13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	BCAP29	Q9UHQ4	241 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	ZNF639	Q9UID6	485 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	PACSIN3	Q9UKS6	424 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	PCDHGA6	Q9Y5G7	932 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	PCSK5	Q92824	1860 aa		13.97	□□□□□ -0.17
ABCF3-204	ENST00000463685	CEP295	Q9C0D2	2601 aa		13.96	□□□□□ -0.17
ABCF3-204	ENST00000463685	LOC102723996	A0A087X1L8	192 aa		13.96	□□□□□ -0.17
ABCF3-204	ENST00000463685	SAGE2P	A6NJ88	616 aa		13.96	□□□□□ -0.17
ABCF3-204	ENST00000463685	CLIC1	O00299	241 aa		13.96	□□□□□ -0.17
ABCF3-204	ENST00000463685	CREG1	O75629	220 aa		13.96	□□□□□ -0.17
ABCF3-204	ENST00000463685	IGHE	P01854	428 aa		13.96	□□□□□ -0.17
ABCF3-204	ENST00000463685	CYC1	P08574	325 aa		13.96	□□□□□ -0.17
ABCF3-204	ENST00000463685	COX6A1	P12074	109 aa		13.96	□□□□□ -0.17
ABCF3-204	ENST00000463685	SLC6A2	P23975	617 aa		13.96	□□□□□ -0.17
ABCF3-204	ENST00000463685	GALNS	P34059	522 aa		13.96	□□□□□ -0.17
ABCF3-204	ENST00000463685	SLC7A2	P52569	658 aa		13.96	□□□□□ -0.17
ABCF3-204	ENST00000463685	SSPN	Q14714	243 aa		13.96	□□□□□ -0.17
ABCF3-204	ENST00000463685	COX20	Q5RI15	118 aa		13.96	□□□□□ -0.17
ABCF3-204	ENST00000463685	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
ABCF3-204	ENST00000463685	SAXO2	Q658L1	398 aa		13.96	□□□□□ -0.17
ABCF3-204	ENST00000463685	NANOGP8	Q6NSW7	305 aa		13.96	□□□□□ -0.17
ABCF3-204	ENST00000463685	ANGPTL8	Q6UXH0	198 aa		13.96	□□□□□ -0.17
ABCF3-204	ENST00000463685	TMEM64	Q6YI46	380 aa		13.96	□□□□□ -0.17
ABCF3-204	ENST00000463685	C6orf120	Q7Z4R8	191 aa		13.96	□□□□□ -0.17
ABCF3-204	ENST00000463685	RNF130	Q86XS8	419 aa		13.96	□□□□□ -0.17
ABCF3-204	ENST00000463685	DEFB107A	Q8IZN7	70 aa		13.96	□□□□□ -0.17
ABCF3-204	ENST00000463685	C10orf111	Q8N326	155 aa		13.96	□□□□□ -0.17
ABCF3-204	ENST00000463685	OR2L13	Q8N349	312 aa		13.96	□□□□□ -0.17
ABCF3-204	ENST00000463685	TRIML2	Q8N7C3	387 aa		13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms