RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 KLK1P06870 262 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 PROS1P07225 676 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 C1QTNF9P0C862 333 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 ETFAP13804 333 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 RRM2P31350 389 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 CRATP43155 626 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 MAGEA8P43361 318 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 GP2P55259 537 aaKnown RBP9.36□□□□□ -0.91
PTPRD-207ENST00000463477 TRA2BP62995 288 aaKnown RBP9.36□□□□□ -0.91
PTPRD-207ENST00000463477 CCL7P80098 99 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 CDK6Q00534 326 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 EMX1Q04741 257 aaPredicted RBP9.36□□□□□ -0.91
PTPRD-207ENST00000463477 SQSTM1Q13501 440 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 ISXQ2M1V0 245 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 KHDRBS2Q5VWX1 349 aaKnown RBP9.36□□□□□ -0.91
PTPRD-207ENST00000463477 CRTC3Q6UUV7 619 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 SLC16A12Q6ZSM3 486 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 PRSS48Q7RTY5 328 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 GALNT5Q7Z7M9 940 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 GALNT10Q86SR1 603 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 ARMC8Q8IUR7 673 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 KDF1Q8NAX2 398 aaPredicted RBP9.36□□□□□ -0.91
PTPRD-207ENST00000463477 BPIFB6Q8NFQ5 453 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 OR5AR1Q8NGP9 310 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 CNIH3Q8TBE1 160 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 GEMIN6Q8WXD5 167 aaKnown RBP9.36□□□□□ -0.91
PTPRD-207ENST00000463477 OR5P2Q8WZ92 322 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 SMPDL3AQ92484 453 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 SGCDQ92629 289 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 TANKQ92844 425 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 PPP1R14BQ96C90 147 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 NEURL3Q96EH8 262 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 TPD52L3Q96J77 140 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 ZNF300Q96RE9 604 aaPredicted RBP9.36□□□□□ -0.91
PTPRD-207ENST00000463477 FUNDC2Q9BWH2 189 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 ZNF717Q9BY31 904 aaPredicted RBP9.36□□□□□ -0.91
PTPRD-207ENST00000463477 NECTIN3Q9NQS3 549 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 PRDM8Q9NQV8 689 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 DKK4Q9UBT3 224 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 ANGPT4Q9Y264 503 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 POFUT2Q9Y2G5 429 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 ZNF451Q9Y4E5 1061 aa9.36□□□□□ -0.91
PTPRD-207ENST00000463477 NINQ8N4C6 2090 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 WDFY3Q8IZQ1 3526 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 IGF2RP11717 2491 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 TRBV23OR9-2A0A075B6M9 112 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 A0A0J9YVX5 310 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 ANKDD1BA6NHY2 528 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 TNFRSF11BO00300 401 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 SLC22A1O15245 554 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 CAPN5O15484 640 aaPredicted RBP9.35□□□□□ -0.91
PTPRD-207ENST00000463477 CLPXO76031 633 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 DIRAS1O95057 198 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 NTRK1P04629 796 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 IL3P08700 152 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 DDCP20711 480 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 BSGP35613 385 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 STT3AP46977 705 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 LIMS1P48059 325 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 PRIM2P49643 509 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 ENTPD1P49961 510 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 CCR8P51685 355 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 ARFIP1P53367 373 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 RPP38P78345 283 aaKnown RBP9.35□□□□□ -0.91
PTPRD-207ENST00000463477 MC1RQ01726 317 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 RTP5Q14D33 572 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 MLC1Q15049 377 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 CLPPQ16740 277 aaPredicted RBP9.35□□□□□ -0.91
PTPRD-207ENST00000463477 COX20Q5RI15 118 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.35□□□□□ -0.91
PTPRD-207ENST00000463477 SAXO2Q658L1 398 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 AVL9Q8NBF6 648 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 PSMA8Q8TAA3 256 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 FNDC8Q8TC99 324 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 SLC37A2Q8TED4 501 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 FCGR1BQ92637 280 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 RORBQ92753 470 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 MAL2Q969L2 176 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 TAMM41Q96BW9 452 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 GFM1Q96RP9 751 aaKnown RBP9.35□□□□□ -0.91
PTPRD-207ENST00000463477 CSF3RQ99062 836 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 NLNQ9BYT8 704 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 SLC6A16Q9GZN6 736 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 RUBCNLQ9H714 662 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 NEUROD4Q9HD90 331 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 TAS2R7Q9NYW3 318 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 B3GNT3Q9Y2A9 372 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 PCDHGA10Q9Y5H3 936 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 ACACAQ13085 2346 aa9.35□□□□□ -0.91
PTPRD-207ENST00000463477 FREM2Q5SZK8 3169 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 MAP1BP46821 2468 aaKnown RBP9.34□□□□□ -0.91
PTPRD-207ENST00000463477 PTGES3LE9PB15 166 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 TMX2-CTNND1H3BSU7 103 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 PLPP1O14494 284 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 CASC3O15234 703 aaKnown RBP9.34□□□□□ -0.91
PTPRD-207ENST00000463477 RGS10O43665 173 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 XPNPEP2O43895 674 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 SH3BGRLO75368 114 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 CSO75390 466 aaKnown RBP9.34□□□□□ -0.91
PTPRD-207ENST00000463477 WBP4O75554 376 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms