RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	ARSG	Q96EG1	525 aa		10.19	□□□□□ -0.78
PTPN7-204	ENST00000462815	TMEM41A	Q96HV5	264 aa		10.19	□□□□□ -0.78
PTPN7-204	ENST00000462815	JSRP1	Q96MG2	331 aa	Predicted RBP	10.19	□□□□□ -0.78
PTPN7-204	ENST00000462815	KRT12	Q99456	494 aa		10.19	□□□□□ -0.78
PTPN7-204	ENST00000462815	PELO	Q9BRX2	385 aa	Known RBP	10.19	□□□□□ -0.78
PTPN7-204	ENST00000462815	TEX10	Q9NXF1	929 aa	Predicted RBP	10.19	□□□□□ -0.78
PTPN7-204	ENST00000462815	PSD3	Q9NYI0	1048 aa		10.19	□□□□□ -0.78
PTPN7-204	ENST00000462815	GRHL1	Q9NZI5	618 aa		10.19	□□□□□ -0.78
PTPN7-204	ENST00000462815	OPTC	Q9UBM4	332 aa		10.19	□□□□□ -0.78
PTPN7-204	ENST00000462815	MTRF1L	Q9UGC7	380 aa	Known RBP	10.19	□□□□□ -0.78
PTPN7-204	ENST00000462815	FETUB	Q9UGM5	382 aa		10.19	□□□□□ -0.78
PTPN7-204	ENST00000462815	ADGRE2	Q9UHX3	823 aa		10.19	□□□□□ -0.78
PTPN7-204	ENST00000462815	NPFFR2	Q9Y5X5	522 aa		10.19	□□□□□ -0.78
PTPN7-204	ENST00000462815	DOCK7	Q96N67	2140 aa		10.19	□□□□□ -0.78
PTPN7-204	ENST00000462815	NIN	Q8N4C6	2090 aa		10.19	□□□□□ -0.78
PTPN7-204	ENST00000462815	C2orf92	A0A1B0GVN3	265 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	HMX2	A2RU54	273 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	TUBAL3	A6NHL2	446 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	CLCA1	A8K7I4	914 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	EFCAB8	A8MWE9	144 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815		B4DXG7	233 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	DYRK3	O43781	588 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	SNX4	O95219	450 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	GOSR1	O95249	250 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	IL2RA	P01589	272 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	FAM58BP	P0C7Q3	252 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	NR2F6	P10588	404 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	GPX3	P22352	226 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	CTSS	P25774	331 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	BUD31	P41223	144 aa	Predicted RBP	10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	AGFG1	P52594	562 aa	Known RBP	10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	DGKQ	P52824	942 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	MRPS25	P82663	173 aa	Known RBP	10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	LTB	Q06643	244 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	MGAT2	Q10469	447 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	FOXF2	Q12947	444 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	CUL3	Q13618	768 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	DDX39B	Q13838	428 aa	Known RBP	10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	SETDB1	Q15047	1291 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	LIPJ	Q5W064	366 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	TMEM198	Q66K66	360 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	L3MBTL4	Q8NA19	623 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	C17orf47	Q8NEP4	570 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	ZPLD1	Q8TCW7	415 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	PYROXD1	Q8WU10	500 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	HGD	Q93099	445 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	HSPBAP1	Q96EW2	488 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	EPB41L4B	Q9H329	900 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	CALHM2	Q9HA72	323 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	RRAGD	Q9NQL2	400 aa	Predicted RBP	10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	SNX15	Q9NRS6	342 aa		10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	LYAR	Q9NX58	379 aa	Known RBP	10.18	□□□□□ -0.78
PTPN7-204	ENST00000462815	SUPT3H	B4E1H0	165 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	CCDC188	H7C350	402 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	EIF3H	O15372	352 aa	Known RBP eCLIP	10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	OR10H2	O60403	315 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	UGDH	O60701	494 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	SUPT3H	O75486	399 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	GBA	P04062	536 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	S100B	P04271	92 aa	Predicted RBP	10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	ABCB1	P08183	1280 aa	Predicted RBP	10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	LTA4H	P09960	611 aa	Known RBP	10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	EPB42	P16452	691 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	PTX3	P26022	381 aa	Predicted RBP	10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	ABCD3	P28288	659 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	TLX1	P31314	330 aa	Predicted RBP	10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	RAP1GDS1	P52306	607 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	DCAF7	P61962	342 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	IRF9	Q00978	393 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	KBTBD12	Q3ZCT8	623 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	WIPI1	Q5MNZ9	446 aa	Predicted RBP	10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	TIGD3	Q6B0B8	471 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	OR52E8	Q6IFG1	317 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	PRR22	Q8IZ63	422 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	TAGAP	Q8N103	731 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	TEX9	Q8N6V9	391 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	SIMC1	Q8NDZ2	872 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	FAM83F	Q8NEG4	500 aa	Predicted RBP	10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	KIF18A	Q8NI77	898 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	RHEBL1	Q8TAI7	183 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	ZNF592	Q92610	1267 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	CTHRC1	Q96CG8	243 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	NXNL1	Q96CM4	212 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	C18orf12	Q96KH6	178 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	GPR78	Q96P69	363 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	UCN2	Q96RP3	112 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	TRIB1	Q96RU8	372 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	NXF5	Q9H1B4	397 aa	Known RBP	10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	OR10A5	Q9H207	317 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	SAYSD1	Q9NPB0	183 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	CLCF1	Q9UBD9	225 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	ZNF639	Q9UID6	485 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	CES1P1	Q9UKY3	287 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	CAMK2A	Q9UQM7	478 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	PCDHGA11	Q9Y5H2	935 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	SAR1B	Q9Y6B6	198 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	CUBN	O60494	3623 aa		10.17	□□□□□ -0.78
PTPN7-204	ENST00000462815	FOXE1	O00358	373 aa	Predicted RBP	10.16	□□□□□ -0.78
PTPN7-204	ENST00000462815	TP53I11	O14683	189 aa		10.16	□□□□□ -0.78
PTPN7-204	ENST00000462815	SIAH2	O43255	324 aa		10.16	□□□□□ -0.78

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