RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 TNNI3P19429 210 aa12.58□□□□□ -0.39
PBRM1-219ENST00000462207 PTPN4P29074 926 aa12.58□□□□□ -0.39
PBRM1-219ENST00000462207 PSME3P61289 254 aa12.58□□□□□ -0.39
PBRM1-219ENST00000462207 RPS15P62841 145 aaKnown RBP12.58□□□□□ -0.39
PBRM1-219ENST00000462207 RPS26P62854 115 aaKnown RBP12.58□□□□□ -0.39
PBRM1-219ENST00000462207 LRRC74AQ0VAA2 488 aa12.58□□□□□ -0.39
PBRM1-219ENST00000462207 DUSP8Q13202 625 aa12.58□□□□□ -0.39
PBRM1-219ENST00000462207 IL10RAQ13651 578 aa12.58□□□□□ -0.39
PBRM1-219ENST00000462207 ZNF267Q14586 743 aaPredicted RBP12.58□□□□□ -0.39
PBRM1-219ENST00000462207 TBC1D25Q3MII6 688 aa12.58□□□□□ -0.39
PBRM1-219ENST00000462207 FHL5Q5TD97 284 aa12.58□□□□□ -0.39
PBRM1-219ENST00000462207 TMEM205Q6UW68 189 aa12.58□□□□□ -0.39
PBRM1-219ENST00000462207 HACD2Q6Y1H2 254 aa12.58□□□□□ -0.39
PBRM1-219ENST00000462207 DEFB107AQ8IZN7 70 aa12.58□□□□□ -0.39
PBRM1-219ENST00000462207 C10orf111Q8N326 155 aa12.58□□□□□ -0.39
PBRM1-219ENST00000462207 VWA5B2Q8N398 1253 aa12.58□□□□□ -0.39
PBRM1-219ENST00000462207 KIF2BQ8N4N8 673 aa12.58□□□□□ -0.39
PBRM1-219ENST00000462207 ZNF321PQ8N8H1 164 aa12.58□□□□□ -0.39
PBRM1-219ENST00000462207 ZNF675Q8TD23 568 aa12.58□□□□□ -0.39
PBRM1-219ENST00000462207 METTL21AQ8WXB1 218 aa12.58□□□□□ -0.39
PBRM1-219ENST00000462207 ROPN1LQ96C74 230 aa12.58□□□□□ -0.39
PBRM1-219ENST00000462207 GPATCH1Q9BRR8 931 aaKnown RBP12.58□□□□□ -0.39
PBRM1-219ENST00000462207 ADAP2Q9NPF8 381 aa12.58□□□□□ -0.39
PBRM1-219ENST00000462207 ZCCHC3Q9NUD5 404 aaKnown RBP12.58□□□□□ -0.39
PBRM1-219ENST00000462207 GID8Q9NWU2 228 aa12.58□□□□□ -0.39
PBRM1-219ENST00000462207 GMPR2Q9P2T1 348 aaKnown RBP12.58□□□□□ -0.39
PBRM1-219ENST00000462207 PACSIN3Q9UKS6 424 aa12.58□□□□□ -0.39
PBRM1-219ENST00000462207 ERVK-19Q9WJR5 959 aa12.58□□□□□ -0.39
PBRM1-219ENST00000462207 HS3ST3B1Q9Y662 390 aa12.58□□□□□ -0.39
PBRM1-219ENST00000462207 PCSK5Q92824 1860 aa12.58□□□□□ -0.4
PBRM1-219ENST00000462207 UPK1AO00322 258 aa12.58□□□□□ -0.4
PBRM1-219ENST00000462207 SEC24DO94855 1032 aaPredicted RBP12.58□□□□□ -0.4
PBRM1-219ENST00000462207 CBX7O95931 251 aa12.58□□□□□ -0.4
PBRM1-219ENST00000462207 ZCCHC18P0CG32 403 aa12.58□□□□□ -0.4
PBRM1-219ENST00000462207 UQCRC2P22695 453 aa12.58□□□□□ -0.4
PBRM1-219ENST00000462207 SLC6A2P23975 617 aa12.58□□□□□ -0.4
PBRM1-219ENST00000462207 SSTR4P31391 388 aa12.58□□□□□ -0.4
PBRM1-219ENST00000462207 OTX2P32243 289 aa12.58□□□□□ -0.4
PBRM1-219ENST00000462207 CCT3P49368 545 aaKnown RBP12.58□□□□□ -0.4
PBRM1-219ENST00000462207 SLC7A2P52569 658 aa12.58□□□□□ -0.4
PBRM1-219ENST00000462207 PRKAG1P54619 331 aa12.58□□□□□ -0.4
PBRM1-219ENST00000462207 TP53BP2Q13625 1128 aa12.58□□□□□ -0.4
PBRM1-219ENST00000462207 ELAVL1Q15717 326 aaKnown RBP12.58□□□□□ -0.4
PBRM1-219ENST00000462207 RUNDC3AQ59EK9 446 aa12.58□□□□□ -0.4
PBRM1-219ENST00000462207 NANOGP8Q6NSW7 305 aa12.58□□□□□ -0.4
PBRM1-219ENST00000462207 ZFP90Q8TF47 636 aa12.58□□□□□ -0.4
PBRM1-219ENST00000462207 OTUB1Q96FW1 271 aaPredicted RBP12.58□□□□□ -0.4
PBRM1-219ENST00000462207 NAF1Q96HR8 494 aaKnown RBP12.58□□□□□ -0.4
PBRM1-219ENST00000462207 ZNF578Q96N58 590 aaPredicted RBP12.58□□□□□ -0.4
PBRM1-219ENST00000462207 ANKRD27Q96NW4 1050 aa12.58□□□□□ -0.4
PBRM1-219ENST00000462207 PHF12Q96QT6 1004 aa12.58□□□□□ -0.4
PBRM1-219ENST00000462207 WDR77Q9BQA1 342 aaPredicted RBP12.58□□□□□ -0.4
PBRM1-219ENST00000462207 PELOQ9BRX2 385 aaKnown RBP12.58□□□□□ -0.4
PBRM1-219ENST00000462207 EPS8L2Q9H6S3 715 aa12.58□□□□□ -0.4
PBRM1-219ENST00000462207 NANOGQ9H9S0 305 aa12.58□□□□□ -0.4
PBRM1-219ENST00000462207 EQTNQ9NQ60 294 aa12.58□□□□□ -0.4
PBRM1-219ENST00000462207 SEMA3GQ9NS98 782 aa12.58□□□□□ -0.4
PBRM1-219ENST00000462207 DDX18Q9NVP1 670 aaKnown RBP12.58□□□□□ -0.4
PBRM1-219ENST00000462207 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.58□□□□□ -0.4
PBRM1-219ENST00000462207 MSRB2Q9Y3D2 182 aa12.58□□□□□ -0.4
PBRM1-219ENST00000462207 AKAP13Q12802 2813 aa12.57□□□□□ -0.4
PBRM1-219ENST00000462207 NUP214P35658 2090 aaPredicted RBP12.57□□□□□ -0.4
PBRM1-219ENST00000462207 LIFP15018 202 aa12.57□□□□□ -0.4
PBRM1-219ENST00000462207 S1PR1P21453 382 aa12.57□□□□□ -0.4
PBRM1-219ENST00000462207 HOXD11P31277 338 aaPredicted RBP12.57□□□□□ -0.4
PBRM1-219ENST00000462207 CHI3L1P36222 383 aaPredicted RBP12.57□□□□□ -0.4
PBRM1-219ENST00000462207 MAP4K2Q12851 820 aa12.57□□□□□ -0.4
PBRM1-219ENST00000462207 COX20Q5RI15 118 aa12.57□□□□□ -0.4
PBRM1-219ENST00000462207 ANGPTL8Q6UXH0 198 aa12.57□□□□□ -0.4
PBRM1-219ENST00000462207 TMEM64Q6YI46 380 aa12.57□□□□□ -0.4
PBRM1-219ENST00000462207 CPEB2Q7Z5Q1 589 aaKnown RBP12.57□□□□□ -0.4
PBRM1-219ENST00000462207 WDR53Q7Z5U6 358 aaPredicted RBP12.57□□□□□ -0.4
PBRM1-219ENST00000462207 PPP1R32Q7Z5V6 425 aa12.57□□□□□ -0.4
PBRM1-219ENST00000462207 PGAM4Q8N0Y7 254 aa12.57□□□□□ -0.4
PBRM1-219ENST00000462207 OR2L13Q8N349 312 aa12.57□□□□□ -0.4
PBRM1-219ENST00000462207 FBXO30Q8TB52 745 aa12.57□□□□□ -0.4
PBRM1-219ENST00000462207 CTHRC1Q96CG8 243 aa12.57□□□□□ -0.4
PBRM1-219ENST00000462207 OR8D2Q9GZM6 311 aa12.57□□□□□ -0.4
PBRM1-219ENST00000462207 SERHL2Q9H4I8 314 aa12.57□□□□□ -0.4
PBRM1-219ENST00000462207 GPN2Q9H9Y4 310 aaPredicted RBP12.57□□□□□ -0.4
PBRM1-219ENST00000462207 TPT1P8Q9HAU6 139 aa12.57□□□□□ -0.4
PBRM1-219ENST00000462207 GPATCH2Q9NW75 528 aa12.57□□□□□ -0.4
PBRM1-219ENST00000462207 CMTM6Q9NX76 183 aa12.57□□□□□ -0.4
PBRM1-219ENST00000462207 MASP2O00187 686 aa12.56□□□□□ -0.4
PBRM1-219ENST00000462207 CLIC1O00299 241 aa12.56□□□□□ -0.4
PBRM1-219ENST00000462207 PLOD2O00469 737 aa12.56□□□□□ -0.4
PBRM1-219ENST00000462207 NME4O00746 187 aa12.56□□□□□ -0.4
PBRM1-219ENST00000462207 SOCS6O14544 535 aa12.56□□□□□ -0.4
PBRM1-219ENST00000462207 GYG2O15488 501 aa12.56□□□□□ -0.4
PBRM1-219ENST00000462207 EMC8O43402 210 aa12.56□□□□□ -0.4
PBRM1-219ENST00000462207 ATP5HO75947 161 aa12.56□□□□□ -0.4
PBRM1-219ENST00000462207 DDAH2O95865 285 aa12.56□□□□□ -0.4
PBRM1-219ENST00000462207 CLPSP04118 112 aa12.56□□□□□ -0.4
PBRM1-219ENST00000462207 MVDP53602 400 aa12.56□□□□□ -0.4
PBRM1-219ENST00000462207 CLN3Q13286 438 aa12.56□□□□□ -0.4
PBRM1-219ENST00000462207 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.56□□□□□ -0.4
PBRM1-219ENST00000462207 C6orf163Q5TEZ5 329 aa12.56□□□□□ -0.4
PBRM1-219ENST00000462207 SAXO2Q658L1 398 aa12.56□□□□□ -0.4
PBRM1-219ENST00000462207 PAPD4Q6PIY7 484 aaKnown RBP12.56□□□□□ -0.4
PBRM1-219ENST00000462207 C16orf89Q6UX73 402 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms