RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 CHCHD2Q9Y6H1 151 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-207ENST00000461798 C2orf92A0A1B0GVN3 265 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 EXOC1LA0A1B0GW35 172 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 A0A1W2PS29 197 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 LRRC3CA6NJW4 275 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 CAPN14A8MX76 684 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 TP53I11O14683 189 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 TRIM3O75382 744 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-207ENST00000461798 TOXO94900 526 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 PDYNP01213 254 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 CELA3AP09093 270 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 CT62P0C5K7 136 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 HSD3B1P14060 373 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 PORP16435 677 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-207ENST00000461798 NAGAP17050 411 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 TAC1P20366 129 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 IMPDH1P20839 514 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 HSD3B2P26439 372 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 SSTR4P31391 388 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 ARL1P40616 181 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-207ENST00000461798 MAN2A2P49641 1150 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 MAPK12P53778 367 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 NUP107P57740 925 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 CLCQ05315 142 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 TFF3Q07654 80 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 PMPCAQ10713 525 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 UNC50Q53HI1 259 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 RTL6Q6ICC9 239 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 SLC48A1Q6P1K1 146 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 LETMD1Q6P1Q0 360 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 COMMD6Q7Z4G1 85 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 RPRMLQ8N4K4 120 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 OR10G3Q8NGC4 313 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 KIF18AQ8NI77 898 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 UHMK1Q8TAS1 419 aaKnown RBP8.42□□□□□ -1.06
BRCA1-207ENST00000461798 ACMSDQ8TDX5 336 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 DOK4Q8TEW6 326 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 CHTF18Q8WVB6 975 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 SELENOMQ8WWX9 145 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 SARAFQ96BY9 339 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 LURAP1Q96LR2 239 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 TTYH2Q9BSA4 534 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 TXLNGYQ9BZA5 131 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 OR10A5Q9H207 317 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 ZNF703Q9H7S9 590 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-207ENST00000461798 FARSBQ9NSD9 589 aaKnown RBP8.42□□□□□ -1.06
BRCA1-207ENST00000461798 PNPLA3Q9NST1 481 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 TMEM216Q9P0N5 145 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 ZNF639Q9UID6 485 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 BOKQ9UMX3 212 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-207ENST00000461798 SLC12A4Q9UP95 1085 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 NPFFR2Q9Y5X5 522 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 LIPGQ9Y5X9 500 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 ZNF407Q9C0G0 2248 aa8.42□□□□□ -1.06
BRCA1-207ENST00000461798 TRGV5A0A0B4J1U4 118 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 ATP6AP2A0A1C7CYW4 349 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 SERTM1A2A2V5 107 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 FIGNL2A6NMB9 653 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 MANBAO00462 879 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 RIPK2O43353 540 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 DLX3O60479 287 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 WDR1O75083 606 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 ATP6AP2O75787 350 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 OR4F21O95013 312 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 SNX4O95219 450 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 KRT6AP02538 564 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 KRT6BP04259 564 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 ATP1B1P05026 303 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 GSTA1P08263 222 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 SNRPB2P08579 225 aaKnown RBP8.41□□□□□ -1.06
BRCA1-207ENST00000461798 RFPL3SP0C7P2 107 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 GLI4P10075 376 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 CSNK2A2P19784 350 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-207ENST00000461798 CAPN3P20807 821 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 ATP5F1P24539 256 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-207ENST00000461798 ELAVL4P26378 380 aaKnown RBP8.41□□□□□ -1.06
BRCA1-207ENST00000461798 SOX18P35713 384 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 KRT6CP48668 564 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 PRKAA2P54646 552 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 KCNJ2P63252 427 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 RASA2Q15283 850 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 RPS6KA2Q15349 733 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 PRICKLE4Q2TBC4 344 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 SGO1Q5FBB7 561 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 ZNF678Q5SXM1 525 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 HLA-DQA1Q5Y7H0 255 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 TMEM81Q6P7N7 255 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 B3GNT6Q6ZMB0 384 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 RPS27LQ71UM5 84 aaKnown RBP8.41□□□□□ -1.06
BRCA1-207ENST00000461798 GBP7Q8N8V2 638 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-207ENST00000461798 FAM13CQ8NE31 585 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 OR5M9Q8NGP3 310 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 SPPL2AQ8TCT8 520 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 CTHRC1Q96CG8 243 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 C11orf24Q96F05 449 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-207ENST00000461798 ZNF681Q96N22 645 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 GAL3ST4Q96RP7 486 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 ZNF382Q96SR6 550 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 ANGPTL4Q9BY76 406 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 KCNJ16Q9NPI9 418 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms