RNA–Protein interactions for RNA: ENST00000461162.5

NINJ1-202, Transcript of ninjurin 1, humanhuman

TSL 2

Gene NINJ1, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-202ENST00000461162 PPP3R2Q96LZ3 170 aa12.65□□□□□ -0.38
NINJ1-202ENST00000461162 HES7Q9BYE0 225 aa12.65□□□□□ -0.38
NINJ1-202ENST00000461162 WWTR1Q9GZV5 400 aa12.65□□□□□ -0.38
NINJ1-202ENST00000461162 MANSC1Q9H8J5 431 aa12.65□□□□□ -0.38
NINJ1-202ENST00000461162 ASF1BQ9NVP2 202 aa12.65□□□□□ -0.38
NINJ1-202ENST00000461162 LRFN1Q9P244 771 aa12.65□□□□□ -0.38
NINJ1-202ENST00000461162 COPS7AQ9UBW8 275 aa12.65□□□□□ -0.38
NINJ1-202ENST00000461162 ZNF780BQ9Y6R6 833 aa12.65□□□□□ -0.38
NINJ1-202ENST00000461162 RP1L1Q8IWN7 2480 aaPredicted RBP12.65□□□□□ -0.38
NINJ1-202ENST00000461162 HMGB1P1B2RPK0 211 aaPredicted RBP12.64□□□□□ -0.39
NINJ1-202ENST00000461162 WWP2O00308 870 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 FCHO1O14526 889 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 DYRK3O43781 588 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 NME2P1O60361 137 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 PLOD3O60568 738 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 PEX11AO75192 247 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 SKAP2O75563 359 aaPredicted RBP12.64□□□□□ -0.39
NINJ1-202ENST00000461162 WISP2O76076 250 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 PSMG1O95456 288 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 CBX6O95503 412 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 SP1P08047 785 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 IFI6P09912 130 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 NME2P22392 152 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 SOX3P41225 446 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 EMDP50402 254 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 SSR4P51571 173 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 EMX2Q04743 252 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 LTB4RQ15722 352 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 GALNTL6Q49A17 601 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 ZNF385BQ569K4 471 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 ZNF766Q5HY98 468 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 SLC25A25Q6KCM7 469 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 RNF111Q6ZNA4 994 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 GPALPP1Q8IXQ4 340 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 KIRREL3Q8IZU9 778 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 VWA5B2Q8N398 1253 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 SLC15A4Q8N697 577 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 ADCY4Q8NFM4 1077 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 C16orf52Q8NHV5 167 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 MGARPQ8TDB4 240 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 GRHL3Q8TE85 626 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 FAR1Q8WVX9 515 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 ZNF75CPQ92670 426 aaPredicted RBP12.64□□□□□ -0.39
NINJ1-202ENST00000461162 EXOSC8Q96B26 276 aaKnown RBP12.64□□□□□ -0.39
NINJ1-202ENST00000461162 AMDHD1Q96NU7 426 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 PAIP2Q9BPZ3 127 aaKnown RBP12.64□□□□□ -0.39
NINJ1-202ENST00000461162 SLX1AQ9BQ83 275 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 CNPPD1Q9BV87 410 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 TRIM4Q9C037 500 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.64□□□□□ -0.391e-6■■□□□ 11.6
NINJ1-202ENST00000461162 OR10A5Q9H207 317 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 REEP4Q9H6H4 257 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 AKTIPQ9H8T0 292 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 MEAF6Q9HAF1 191 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.64□□□□□ -0.39
NINJ1-202ENST00000461162 NKIRAS1Q9NYS0 192 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 ABI3Q9P2A4 366 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 ATP6V1HQ9UI12 483 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 DTX4Q9Y2E6 619 aa12.64□□□□□ -0.39
NINJ1-202ENST00000461162 COPG1Q9Y678 874 aaKnown RBP12.64□□□□□ -0.39
NINJ1-202ENST00000461162 LRRK2Q5S007 2527 aa12.63□□□□□ -0.39
NINJ1-202ENST00000461162 POLEQ07864 2286 aa12.63□□□□□ -0.39
NINJ1-202ENST00000461162 CLEC18AA5D8T8 446 aa12.63□□□□□ -0.39
NINJ1-202ENST00000461162 TCP11X1B4DZS4 312 aa12.63□□□□□ -0.39
NINJ1-202ENST00000461162 PLOD2O00469 737 aa12.63□□□□□ -0.39
NINJ1-202ENST00000461162 ANKRD28O15084 1053 aa12.63□□□□□ -0.39
NINJ1-202ENST00000461162 SLC25A12O75746 678 aa12.63□□□□□ -0.39
NINJ1-202ENST00000461162 ZIC2O95409 532 aaPredicted RBP12.63□□□□□ -0.39
NINJ1-202ENST00000461162 PCSK2P16519 638 aa12.63□□□□□ -0.39
NINJ1-202ENST00000461162 NT5EP21589 574 aa12.63□□□□□ -0.39
NINJ1-202ENST00000461162 GPX3P22352 226 aa12.63□□□□□ -0.39
NINJ1-202ENST00000461162 MPIP34949 423 aa12.63□□□□□ -0.39
NINJ1-202ENST00000461162 TDGF1P3P51864 188 aa12.63□□□□□ -0.39
NINJ1-202ENST00000461162 MRPS35P82673 323 aaKnown RBP12.63□□□□□ -0.39
NINJ1-202ENST00000461162 PTGR1Q14914 329 aa12.63□□□□□ -0.39
NINJ1-202ENST00000461162 ATP6AP1LQ52LC2 224 aa12.63□□□□□ -0.39
NINJ1-202ENST00000461162 CLEC18BQ6UXF7 455 aa12.63□□□□□ -0.39
NINJ1-202ENST00000461162 MAVSQ7Z434 540 aa12.63□□□□□ -0.39
NINJ1-202ENST00000461162 CLEC18CQ8NCF0 446 aa12.63□□□□□ -0.39
NINJ1-202ENST00000461162 GALNT11Q8NCW6 608 aa12.63□□□□□ -0.39
NINJ1-202ENST00000461162 OR9A2Q8NGT5 310 aa12.63□□□□□ -0.39
NINJ1-202ENST00000461162 MTERF3Q96E29 417 aa12.63□□□□□ -0.39
NINJ1-202ENST00000461162 TSSK3Q96PN8 268 aa12.63□□□□□ -0.39
NINJ1-202ENST00000461162 GLIPR2Q9H4G4 154 aa12.63□□□□□ -0.39
NINJ1-202ENST00000461162 NTMQ9P121 344 aa12.63□□□□□ -0.39
NINJ1-202ENST00000461162 A0A087WV62 115 aa12.62□□□□□ -0.39
NINJ1-202ENST00000461162 PYCARD-AS1I3L0S3 204 aa12.62□□□□□ -0.39
NINJ1-202ENST00000461162 SDHDO14521 159 aa12.62□□□□□ -0.39
NINJ1-202ENST00000461162 SLITRK5O94991 958 aa12.62□□□□□ -0.39
NINJ1-202ENST00000461162 WISP1O95388 367 aa12.62□□□□□ -0.39
NINJ1-202ENST00000461162 FBXO45P0C2W1 286 aa12.62□□□□□ -0.39
NINJ1-202ENST00000461162 PRPS2P11908 318 aa12.62□□□□□ -0.39
NINJ1-202ENST00000461162 CD46P15529 392 aa12.62□□□□□ -0.39
NINJ1-202ENST00000461162 ASMTP46597 345 aa12.62□□□□□ -0.39
NINJ1-202ENST00000461162 EXOSC7Q15024 291 aaKnown RBP12.62□□□□□ -0.39
NINJ1-202ENST00000461162 PDCD2Q16342 344 aaPredicted RBP12.62□□□□□ -0.39
NINJ1-202ENST00000461162 RNFT1Q5M7Z0 435 aa12.62□□□□□ -0.39
NINJ1-202ENST00000461162 IL23RQ5VWK5 629 aa12.62□□□□□ -0.39
NINJ1-202ENST00000461162 ATG16L1Q676U5 607 aa12.62□□□□□ -0.39
NINJ1-202ENST00000461162 OGFOD2Q6N063 350 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms