RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 ABCC4O15439 1325 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 ANKRD61A6NGH8 418 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 ANKRD30BLA7E2S9 258 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 C12orf71A8MTZ7 269 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 ZNF701M0R085 212 aaPredicted RBP3.01□□□□□ -1.93
VPS8-215ENST00000460158 TRDMT1O14717 391 aaKnown RBP3.01□□□□□ -1.93
VPS8-215ENST00000460158 POLR1CO15160 346 aaPredicted RBP3.01□□□□□ -1.93
VPS8-215ENST00000460158 ATP6V0E1O15342 81 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 FCGR3BO75015 233 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 GMNNO75496 209 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 PRKRAO75569 313 aaKnown RBP3.01□□□□□ -1.93
VPS8-215ENST00000460158 CLPXO76031 633 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 LUC7L3O95232 432 aaKnown RBP3.01□□□□□ -1.93
VPS8-215ENST00000460158 TGM6O95932 706 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 GAS8O95995 478 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 MBP02144 154 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 RPSAP08865 295 aaKnown RBP3.01□□□□□ -1.93
VPS8-215ENST00000460158 ANPEPP15144 967 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 EFNA1P20827 205 aaPredicted RBP3.01□□□□□ -1.93
VPS8-215ENST00000460158 PSMB4P28070 264 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 PPP2R1AP30153 589 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 CDKN1AP38936 164 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 LHX1P48742 406 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 BCAP31P51572 246 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 ARHGDIBP52566 201 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 YWHAEP62258 255 aaKnown RBP3.01□□□□□ -1.93
VPS8-215ENST00000460158 CBX1P83916 185 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 MAB21L1Q13394 359 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 STXBP2Q15833 593 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 HNRNPA1L2Q32P51 320 aaKnown RBP3.01□□□□□ -1.93
VPS8-215ENST00000460158 KIAA1644Q3SXP7 199 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 UGT3A2Q3SY77 523 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 CCDC14Q49A88 953 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 ZNF311Q5JNZ3 666 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 WLSQ5T9L3 541 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 PRAMEF5Q5TYX0 476 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 PRAMEF6Q5VXH4 476 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 PRAMEF7Q5VXH5 474 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 ATL3Q6DD88 541 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 PTRHD1Q6GMV3 140 aaKnown RBP3.01□□□□□ -1.93
VPS8-215ENST00000460158 FAM53AQ6NSI3 398 aaPredicted RBP3.01□□□□□ -1.93
VPS8-215ENST00000460158 C11orf63Q6NUN7 778 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 BLOC1S2Q6QNY1 142 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 EIF3MQ7L2H7 374 aaKnown RBP3.01□□□□□ -1.93
VPS8-215ENST00000460158 VTCN1Q7Z7D3 282 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 LUZP2Q86TE4 346 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 KLHDC8AQ8IYD2 350 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 CDK20Q8IZL9 346 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 EID3Q8N140 333 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 PYROXD2Q8N2H3 581 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 GPR137CQ8N3F9 429 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 CERS5Q8N5B7 392 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 BCORP1Q8N888 145 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 TRPV3Q8NET8 790 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 KBTBD8Q8NFY9 601 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 LRRC20Q8TCA0 184 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 LKAAEAR1Q8TD35 194 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 CD300LFQ8TDQ1 290 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 U2AF1L4Q8WU68 220 aaKnown RBP3.01□□□□□ -1.93
VPS8-215ENST00000460158 MAIP1Q8WWC4 291 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 FAM46BQ96A09 425 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 MOB3AQ96BX8 217 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 HAVCR1Q96D42 359 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 THOC1Q96FV9 657 aaKnown RBP3.01□□□□□ -1.93
VPS8-215ENST00000460158 OTUB1Q96FW1 271 aaPredicted RBP3.01□□□□□ -1.93
VPS8-215ENST00000460158 ZBED3Q96IU2 234 aaPredicted RBP3.01□□□□□ -1.93
VPS8-215ENST00000460158 MUS81Q96NY9 551 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 ZNF559Q9BR84 538 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 NTMT1Q9BV86 223 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 BBS2Q9BXC9 721 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 TDRD1Q9BXT4 1180 aaKnown RBP3.01□□□□□ -1.93
VPS8-215ENST00000460158 FRMD8P1Q9BZ68 369 aaPredicted RBP3.01□□□□□ -1.93
VPS8-215ENST00000460158 EGLN1Q9GZT9 426 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 TSPYL1Q9H0U9 437 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 RHBGQ9H310 441 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 RGCCQ9H4X1 137 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 IL26Q9NPH9 171 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 PNO1Q9NRX1 252 aaKnown RBP3.01□□□□□ -1.93
VPS8-215ENST00000460158 MRPL22Q9NWU5 206 aaKnown RBP3.01□□□□□ -1.93
VPS8-215ENST00000460158 SEC14L3Q9UDX4 400 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 IL20RAQ9UHF4 553 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 CRLS1Q9UJA2 301 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 PACSIN2Q9UNF0 486 aaPredicted RBP3.01□□□□□ -1.93
VPS8-215ENST00000460158 GPR132Q9UNW8 380 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 KCNJ14Q9UNX9 436 aa3.01□□□□□ -1.93
VPS8-215ENST00000460158 FOXA2Q9Y261 457 aaPredicted RBP3.01□□□□□ -1.93
VPS8-215ENST00000460158 PFASO15067 1338 aa3□□□□□ -1.93
VPS8-215ENST00000460158 SF3B1O75533 1304 aaKnown RBP eCLIP3□□□□□ -1.93
VPS8-215ENST00000460158 EVC2Q86UK5 1308 aa3□□□□□ -1.93
VPS8-215ENST00000460158 A0A0G2JLW4 131 aa3□□□□□ -1.93
VPS8-215ENST00000460158 A0A1W2PPK0 400 aa3□□□□□ -1.93
VPS8-215ENST00000460158 CYSRT1A8MQ03 144 aa3□□□□□ -1.93
VPS8-215ENST00000460158 BLOC1S5-TXNDC5H3BN57 136 aa3□□□□□ -1.93
VPS8-215ENST00000460158 GOLGA8TH3BQL2 631 aa3□□□□□ -1.93
VPS8-215ENST00000460158 ZNF197O14709 1029 aa3□□□□□ -1.93
VPS8-215ENST00000460158 LSM1O15116 133 aaKnown RBP3□□□□□ -1.93
VPS8-215ENST00000460158 LINC01565O15544 149 aa3□□□□□ -1.93
VPS8-215ENST00000460158 RNF13O43567 381 aa3□□□□□ -1.93
VPS8-215ENST00000460158 PCDH7O60245 1069 aa3□□□□□ -1.93
VPS8-215ENST00000460158 ECE2O60344 883 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms