RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 ERGP11308 486 aa17.13■□□□□ 0.33
HPS3-202ENST00000460120 PRDX1Q06830 199 aaKnown RBP17.13■□□□□ 0.33
HPS3-202ENST00000460120 IRF3Q14653 427 aa17.13■□□□□ 0.33
HPS3-202ENST00000460120 SHFQ7M4L6 423 aa17.13■□□□□ 0.33
HPS3-202ENST00000460120 CREB3L4Q8TEY5 395 aa17.13■□□□□ 0.33
HPS3-202ENST00000460120 KAT2AQ92830 837 aa17.13■□□□□ 0.33
HPS3-202ENST00000460120 COL26A1Q96A83 441 aa17.13■□□□□ 0.33
HPS3-202ENST00000460120 TSSK6Q9BXA6 273 aa17.13■□□□□ 0.33
HPS3-202ENST00000460120 CA5BQ9Y2D0 317 aa17.13■□□□□ 0.33
HPS3-202ENST00000460120 PRKYO43930 277 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 ADAP00813 363 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 SERPINB1P30740 379 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 NTSP30990 170 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 DBPQ10586 325 aaPredicted RBP17.12■□□□□ 0.33
HPS3-202ENST00000460120 SGCGQ13326 291 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 ARHGAP19Q14CB8 494 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 TOR1AIP1Q5JTV8 583 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 CLEC12AQ5QGZ9 265 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 KIAA1211LQ6NV74 962 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 ZNF367Q7RTV3 350 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 OPALINQ96PE5 141 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 NUAK2Q9H093 628 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 EGLN3Q9H6Z9 239 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 SLC6A20Q9NP91 592 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 ERVK13-1Q9NX77 482 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 A4GNTQ9UNA3 340 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 MYO9BQ13459 2157 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 A0A0A6YYD5 115 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 CCRL2O00421 344 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 PDE9AO76083 593 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 PPP2R1BP30154 601 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 UGT2B10P36537 528 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 RAB28P51157 221 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 SNRPNP63162 240 aaKnown RBP17.12■□□□□ 0.33
HPS3-202ENST00000460120 ZNF91Q05481 1191 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 LTB4RQ15722 352 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 FBXO43Q4G163 708 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 SLC30A8Q8IWU4 369 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 YAF2Q8IY57 180 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 OR4K5Q8NGD3 323 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 RPP25Q9BUL9 199 aaKnown RBP17.12■□□□□ 0.33
HPS3-202ENST00000460120 NTNG1Q9Y2I2 539 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 VCANP13611 3396 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 A8MU76 341 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 ISM1B1AKI9 464 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 FAAHO00519 579 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 CSO75390 466 aaKnown RBP17.12■□□□□ 0.33
HPS3-202ENST00000460120 MMP11P24347 488 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 SLC9A5Q14940 896 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 LIPKQ5VXJ0 399 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 RAB42Q8N4Z0 105 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 ACOT4Q8N9L9 421 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 CNRIP1Q96F85 164 aaPredicted RBP17.12■□□□□ 0.33
HPS3-202ENST00000460120 TRMT61AQ96FX7 289 aaKnown RBP17.12■□□□□ 0.33
HPS3-202ENST00000460120 CRELD1Q96HD1 420 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 SLC6A18Q96N87 628 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 C6orf106Q9H6K1 298 aaPredicted RBP17.12■□□□□ 0.33
HPS3-202ENST00000460120 SNTG1Q9NSN8 517 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 IL20RAQ9UHF4 553 aa17.12■□□□□ 0.33
HPS3-202ENST00000460120 CPSF4LA6NMK7 179 aaKnown RBP17.11■□□□□ 0.33
HPS3-202ENST00000460120 SSX4O60224 188 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 EPPINO95925 133 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 MC3RP41968 323 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 ALDH6A1Q02252 535 aaKnown RBP17.11■□□□□ 0.33
HPS3-202ENST00000460120 LRRC32Q14392 662 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 SPATC1Q76KD6 591 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 ZER1Q7Z7L7 766 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 OR4E2Q8NGC2 313 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 OR9A2Q8NGT5 310 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 RAB7BQ96AH8 199 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 CEP19Q96LK0 163 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 PCBD2Q9H0N5 130 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 DDX31Q9H8H2 851 aaKnown RBP17.11■□□□□ 0.33
HPS3-202ENST00000460120 CNIH4Q9P003 139 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 ENOPH1Q9UHY7 261 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 MGAT4BQ9UQ53 548 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 HEATR5BQ9P2D3 2071 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 A0A1W2PQU0 124 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 AIFM1O95831 613 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 FCARP24071 287 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 AZGP1P25311 298 aaKnown RBP17.11■□□□□ 0.33
HPS3-202ENST00000460120 AVPR1BP47901 424 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 OLR1P78380 273 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 FUT5Q11128 374 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 GINS1Q14691 196 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 ACSM5Q6NUN0 579 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 ATCAYQ86WG3 371 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 KRT73Q86Y46 540 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 KIAA1958Q8N8K9 716 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 KLHL6Q8WZ60 621 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 ARMC5Q96C12 935 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 TMEM106CQ9BVX2 250 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 TEX101Q9BY14 249 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 PLA2G12AQ9BZM1 189 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 MKRN2Q9H000 416 aaKnown RBP17.11■□□□□ 0.33
HPS3-202ENST00000460120 HHATLQ9HCP6 504 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 PHPT1Q9NRX4 125 aaPredicted RBP17.11■□□□□ 0.33
HPS3-202ENST00000460120 FBXL12Q9NXK8 326 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 TSC22D4Q9Y3Q8 395 aa17.11■□□□□ 0.33
HPS3-202ENST00000460120 CH25HO95992 272 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms