RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 AURKCQ9UQB9 309 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 NAALAD2Q9Y3Q0 740 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 IGHV5-51A0A0C4DH38 117 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 TEX51A0A1B0GUA7 166 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 TCRBV5S2A0A599 114 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 HYKKA2RU49 373 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 CPED1A4D0V7 1026 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 EME2A4GXA9 379 aaPredicted RBP8.41□□□□□ -1.06
VPS50-207ENST00000458530 C5orf58C9J3I9 102 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 H0YIG0 161 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 H3BNX3 289 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 CLDN4O14493 209 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 EMC8O43402 210 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 SIGLEC6O43699 453 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 PEX1O43933 1283 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 DEAF1O75398 565 aaPredicted RBP8.41□□□□□ -1.06
VPS50-207ENST00000458530 OR2B3O76000 313 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 SOX30O94993 753 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 AGR2O95994 175 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 B3GALT4O96024 378 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 BMP2P12643 396 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 NCK1P16333 377 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 CD1CP29017 333 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 GRK6P43250 576 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 HSPA13P48723 471 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 CCT3P49368 545 aaKnown RBP8.41□□□□□ -1.06
VPS50-207ENST00000458530 GZMMP51124 257 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 ITGA1P56199 1179 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 DSTNP60981 165 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 ACY1Q03154 408 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 BIKQ13323 160 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 RTP5Q14D33 572 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 MPEG1Q2M385 716 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.41□□□□□ -1.06
VPS50-207ENST00000458530 NKAIN2Q5VXU1 208 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 C18orf63Q68DL7 685 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 SZRD1Q7Z422 152 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 TMPRSS12Q86WS5 348 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 RNF130Q86XS8 419 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 ZZZ3Q8IYH5 903 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 ADGRG5Q8IZF4 528 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 MMP21Q8N119 569 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 CA13Q8N1Q1 262 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 EID2Q8N6I1 236 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 AMER3Q8N944 861 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 PAPD5Q8NDF8 572 aaKnown RBP8.41□□□□□ -1.06
VPS50-207ENST00000458530 ADCY4Q8NFM4 1077 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 OR4D9Q8NGE8 314 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 PNPT1Q8TCS8 783 aaKnown RBP8.41□□□□□ -1.06
VPS50-207ENST00000458530 CANT1Q8WVQ1 401 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 LZICQ8WZA0 190 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 SLC47A1Q96FL8 570 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 WBP1Q96G27 269 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 SLC41A2Q96JW4 573 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 PELOQ9BRX2 385 aaKnown RBP8.41□□□□□ -1.06
VPS50-207ENST00000458530 KLHL4Q9C0H6 718 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 GLIPR2Q9H4G4 154 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 CXorf36Q9H7Y0 433 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 SYNPO2LQ9H987 977 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 ZCCHC3Q9NUD5 404 aaKnown RBP8.41□□□□□ -1.06
VPS50-207ENST00000458530 DCAF13Q9NV06 445 aaKnown RBP8.41□□□□□ -1.06
VPS50-207ENST00000458530 KCMF1Q9P0J7 381 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 SERTAD3Q9UJW9 196 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 CES1P1Q9UKY3 287 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 CCDC88CQ9P219 2028 aa8.41□□□□□ -1.06
VPS50-207ENST00000458530 UBR5O95071 2799 aaPredicted RBP8.4□□□□□ -1.06
VPS50-207ENST00000458530 FAM149AA5PLN7 773 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 GLOD5A6NK44 160 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 TMEM150CB9EJG8 249 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 PGRMC2O15173 223 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 B4GAT1O43505 415 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 KIF1CO43896 1103 aaKnown RBP8.4□□□□□ -1.06
VPS50-207ENST00000458530 PRAMEF10O60809 474 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 RDH16O75452 317 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 GPR75O95800 540 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 SERPINA1P01009 418 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 LDLRP01130 860 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 ARAFP10398 606 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 CKMT1AP12532 417 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 CPMP14384 443 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 PORP16435 677 aaPredicted RBP8.4□□□□□ -1.06
VPS50-207ENST00000458530 NELFEP18615 380 aaKnown RBP8.4□□□□□ -1.06
VPS50-207ENST00000458530 CSF2RBP32927 897 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 GABRA4P48169 554 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 CDK9P50750 372 aaKnown RBP8.4□□□□□ -1.06
VPS50-207ENST00000458530 TRA2AQ13595 282 aaKnown RBP eCLIP8.4□□□□□ -1.06
VPS50-207ENST00000458530 RUNX2Q13950 521 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 SCARB2Q14108 478 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 GRAMD1BQ3KR37 738 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 LRRC23Q53EV4 343 aaPredicted RBP8.4□□□□□ -1.06
VPS50-207ENST00000458530 SNAP47Q5SQN1 464 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 ATAD3BQ5T9A4 648 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 GUSBP11Q6P575 273 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 CEACAM20Q6UY09 585 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 USP53Q70EK8 1073 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 ZNF551Q7Z340 670 aaPredicted RBP8.4□□□□□ -1.06
VPS50-207ENST00000458530 C6orf120Q7Z4R8 191 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 PATL1Q86TB9 770 aaKnown RBP8.4□□□□□ -1.06
VPS50-207ENST00000458530 LURAP1LQ8IV03 231 aa8.4□□□□□ -1.06
VPS50-207ENST00000458530 ZNF595Q8IYB9 648 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms