RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 LIPCP11150 499 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 GARNL3Q5VVW2 1013 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 METTL2BQ6P1Q9 378 aaKnown RBP18.76■□□□□ 0.59
SNX27-204ENST00000458013 NATD1Q8N6N6 113 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 OR2M4Q96R27 311 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 SEC14L4Q9UDX3 406 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 A6NL46 340 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 FBXO45P0C2W1 286 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 KCNC1P48547 511 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 BATFQ16520 125 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 ZNF550Q7Z398 422 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 SLCO2A1Q92959 643 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 ZUFSPQ96AP4 578 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 CWH43Q9H720 699 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 TMEM59LQ9UK28 342 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 SCAMP2O15127 329 aaKnown RBP18.76■□□□□ 0.59
SNX27-204ENST00000458013 ATE1O95260 518 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 GKN3PP0CG01 181 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 HSD3B1P14060 373 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 EDN3P14138 238 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 JUNDP17535 347 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 TIA1P31483 386 aaKnown RBP eCLIP18.76■□□□□ 0.59
SNX27-204ENST00000458013 BCL2L15Q5TBC7 163 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 GPR139Q6DWJ6 353 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 LRRC25Q8N386 305 aaPredicted RBP18.76■□□□□ 0.59
SNX27-204ENST00000458013 OR5P2Q8WZ92 322 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 G6PC3Q9BUM1 346 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 ARL6Q9H0F7 186 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 ETV5P41161 510 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 PTH2RP49190 550 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 RPS21P63220 83 aaKnown RBP18.76■□□□□ 0.59
SNX27-204ENST00000458013 NETO1Q8TDF5 533 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 GLYATL2Q8WU03 294 aa18.76■□□□□ 0.59
SNX27-204ENST00000458013 SHMT2P34897 504 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 COMMD7Q86VX2 200 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 GLYATL1Q969I3 302 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 LSM5Q9Y4Y9 91 aaKnown RBP18.75■□□□□ 0.59
SNX27-204ENST00000458013 A0A1W2PQU0 124 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 APOC3P02656 99 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 CSNK1A1LQ8N752 337 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 OR9Q2Q8NGE9 314 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 MMP28Q9H239 520 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 PTPN6P29350 595 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 PPA1Q15181 289 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 ZNF829Q3KNS6 432 aaPredicted RBP18.75■□□□□ 0.59
SNX27-204ENST00000458013 KNG1P01042 644 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 ADRB3P13945 408 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 IL1RNP18510 177 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 AQP2P41181 271 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 MAP2K3P46734 347 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 ZNF280AP59817 542 aaPredicted RBP18.75■□□□□ 0.59
SNX27-204ENST00000458013 ELOCQ15369 112 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 BEST3Q8N1M1 668 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 ERVK-19Q9WJR5 959 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 EMC8O43402 210 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 IFNA5P01569 189 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 DOC2AQ14183 400 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 EEF1A1P5Q5VTE0 462 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 TMPPEQ6ZT21 453 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 OR10T2Q8NGX3 314 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 SPRYD4Q8WW59 207 aaPredicted RBP18.75■□□□□ 0.59
SNX27-204ENST00000458013 NFS1Q9Y697 457 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 GGT3PA6NGU5 568 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 SOD2P04179 222 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 RSU1Q15404 277 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 ZFAND4Q86XD8 727 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 ZSCAN1Q8NBB4 408 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 ZNF382Q96SR6 550 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 STUB1Q9UNE7 303 aa18.75■□□□□ 0.59
SNX27-204ENST00000458013 TYROBPO43914 113 aa18.74■□□□□ 0.59
SNX27-204ENST00000458013 LATS1O95835 1130 aa18.74■□□□□ 0.59
SNX27-204ENST00000458013 S1PR4O95977 384 aa18.74■□□□□ 0.59
SNX27-204ENST00000458013 APEHP13798 732 aaKnown RBP18.74■□□□□ 0.59
SNX27-204ENST00000458013 NFATC4Q14934 902 aa18.74■□□□□ 0.59
SNX27-204ENST00000458013 CATSPEREQ5SY80 951 aa18.74■□□□□ 0.59
SNX27-204ENST00000458013 EIF5AL1Q6IS14 154 aaKnown RBP18.74■□□□□ 0.59
SNX27-204ENST00000458013 APIPQ96GX9 242 aa18.74■□□□□ 0.59
SNX27-204ENST00000458013 METTL2AQ96IZ6 378 aaKnown RBP18.74■□□□□ 0.59
SNX27-204ENST00000458013 PLIN4Q96Q06 1357 aa18.74■□□□□ 0.59
SNX27-204ENST00000458013 A6NIN4 97 aa18.74■□□□□ 0.59
SNX27-204ENST00000458013 SLC16A5O15375 505 aa18.74■□□□□ 0.59
SNX27-204ENST00000458013 GPR17Q13304 367 aa18.74■□□□□ 0.59
SNX27-204ENST00000458013 ST6GALNAC5Q9BVH7 336 aa18.74■□□□□ 0.59
SNX27-204ENST00000458013 MYOM1P52179 1685 aa18.74■□□□□ 0.59
SNX27-204ENST00000458013 VSTM5A8MXK1 200 aa18.74■□□□□ 0.59
SNX27-204ENST00000458013 RPS17P08708 135 aaKnown RBP18.74■□□□□ 0.59
SNX27-204ENST00000458013 LUMP51884 338 aaPredicted RBP18.74■□□□□ 0.59
SNX27-204ENST00000458013 SLC35G1Q2M3R5 365 aa18.74■□□□□ 0.59
SNX27-204ENST00000458013 C6orf141Q5SZD1 244 aa18.74■□□□□ 0.59
SNX27-204ENST00000458013 TRIM46Q7Z4K8 759 aa18.74■□□□□ 0.59
SNX27-204ENST00000458013 SCML4Q8N228 414 aa18.74■□□□□ 0.59
SNX27-204ENST00000458013 KCNN1Q92952 543 aa18.74■□□□□ 0.59
SNX27-204ENST00000458013 ZDHHC12Q96GR4 267 aa18.74■□□□□ 0.59
SNX27-204ENST00000458013 SLC45A3Q96JT2 553 aa18.74■□□□□ 0.59
SNX27-204ENST00000458013 CNN2Q99439 309 aaKnown RBP18.74■□□□□ 0.59
SNX27-204ENST00000458013 UBE2J1Q9Y385 318 aaPredicted RBP18.74■□□□□ 0.59
SNX27-204ENST00000458013 SLC35E2BP0CK96 405 aa18.74■□□□□ 0.59
SNX27-204ENST00000458013 VIPR2P41587 438 aa18.74■□□□□ 0.59
SNX27-204ENST00000458013 FAM214AQ32MH5 1076 aa18.74■□□□□ 0.59
SNX27-204ENST00000458013 IL22RA1Q8N6P7 574 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms