RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 CFAP52Q8N1V2 620 aa6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 PPM1NQ8N819 430 aa6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 DUSP18Q8NEJ0 188 aa6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 VN1R2Q8NFZ6 395 aa6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 OR4K15Q8NH41 348 aa6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 ARRDC2Q8TBH0 407 aa6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 BPIFB1Q8TDL5 484 aa6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 GPBAR1Q8TDU6 330 aa6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 PAQR8Q8TEZ7 354 aa6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 KIAA1143Q96AT1 154 aaPredicted RBP6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 LGALS12Q96DT0 336 aa6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 IMP4Q96G21 291 aaKnown RBP6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 SCMH1Q96GD3 660 aa6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 WFIKKN1Q96NZ8 548 aa6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 LENG8Q96PV6 779 aaPredicted RBP6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 CDC6Q99741 560 aa6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 MGME1Q9BQP7 344 aa6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 DPH7Q9BTV6 452 aa6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 NKX2-4Q9H2Z4 354 aa6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 TREM1Q9NP99 234 aa6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 KRT84Q9NSB2 600 aa6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 RBM22Q9NW64 420 aaKnown RBP eCLIP6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 TEX10Q9NXF1 929 aaPredicted RBP6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 NUFIP1Q9UHK0 495 aaKnown RBP6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 INTS6Q9UL03 887 aaKnown RBP6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 SLC39A10Q9ULF5 831 aa6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 ATXN7L1Q9ULK2 861 aaPredicted RBP6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 AAR2Q9Y312 384 aaKnown RBP6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 PUS1Q9Y606 427 aaKnown RBP eCLIP6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 BRWD1Q9NSI6 2320 aa6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 KIAA1549LQ6ZVL6 1849 aa6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 COL4A3Q01955 1670 aa6.5□□□□□ -1.37
CUBNP3-201ENST00000457461 HMX2A2RU54 273 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 FAM159BA6NKW6 160 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 BLOC1S5-TXNDC5H3BN57 136 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 MKRN2OSH3BPM6 223 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 HSPA12AO43301 675 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 FADS1O60427 444 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 SMPD2O60906 423 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 GLRA3O75311 464 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 ZFPL1O95159 310 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 HSPA4LO95757 839 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 CD160O95971 181 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 HPRP00739 348 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 RHOCP08134 193 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 PGAM1P18669 254 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 CR2P20023 1033 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 ANXA7P20073 488 aaKnown RBP6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 CHRM3P20309 590 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 ACADLP28330 430 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 THBS2P35442 1172 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 CSNK1DP48730 415 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 LIMK2P53671 638 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 GEMP55040 296 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 MAZP56270 477 aaKnown RBP6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 CXCR4P61073 352 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 RRAS2P62070 204 aaPredicted RBP6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 SLAMF1Q13291 335 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 IL18R1Q13478 541 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 OLIG2Q13516 323 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 TP53BP2Q13625 1128 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 DGCR6Q14129 220 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 PRPSAP1Q14558 356 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 IHHQ14623 411 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 TEAD2Q15562 447 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 ZNF239Q16600 458 aaKnown RBP6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 ARHGAP15Q53QZ3 475 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 ZNF805Q5CZA5 627 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 NHLRC3Q5JS37 347 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 MARC1Q5VT66 337 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 HACD4Q5VWC8 232 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 TTC23Q5W5X9 447 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 ESRP1Q6NXG1 681 aaKnown RBP6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 TMEM184AQ6ZMB5 413 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 THAP5Q7Z6K1 395 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 PEG10Q86TG7 708 aaKnown RBP6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 PLD3Q8IV08 490 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 PGBD3Q8N328 593 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 PGBD5Q8N414 524 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 ARRDC1Q8N5I2 433 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 FAM181AQ8N9Y4 354 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 UXS1Q8NBZ7 420 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 FAM46DQ8NEK8 389 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 OR10A7Q8NGE5 316 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 MRGPRDQ8TDS7 321 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 SH3RF2Q8TEC5 729 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 METTL21AQ8WXB1 218 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 FCGR1BQ92637 280 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 AURKBQ96GD4 344 aaPredicted RBP6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 NARS2Q96I59 477 aaKnown RBP6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 LMLNQ96KR4 655 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 MRGPRX4Q96LA9 322 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 MRGPRX2Q96LB1 330 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 ADAD1Q96M93 576 aaKnown RBP6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 WDFY2Q96P53 400 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 FCRL4Q96PJ5 515 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 KCNA7Q96RP8 456 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 SRRQ9GZT4 340 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 EGLN1Q9GZT9 426 aa6.49□□□□□ -1.37
CUBNP3-201ENST00000457461 TOLLIPQ9H0E2 274 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms