RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 BICRALQ6AI39 1079 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 TNFAIP8L2Q6P589 184 aaPredicted RBP9.77□□□□□ -0.85
CLIP4-208ENST00000456385 TMEM81Q6P7N7 255 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 CD200R1LQ6Q8B3 271 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 CXCL17Q6UXB2 119 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 KRT74Q7RTS7 529 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 KIAA0907Q7Z7F0 614 aaPredicted RBP9.77□□□□□ -0.85
CLIP4-208ENST00000456385 GPAT4Q86UL3 456 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 GPALPP1Q8IXQ4 340 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 ADGRF3Q8IZF5 1079 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 IL17RCQ8NAC3 791 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 BEST4Q8NFU0 473 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 SLC9A6Q92581 669 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 THAP7Q9BT49 309 aaPredicted RBP9.77□□□□□ -0.85
CLIP4-208ENST00000456385 AP5M1Q9H0R1 490 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 REEP4Q9H6H4 257 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 LIN7BQ9HAP6 207 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 SEMA3GQ9NS98 782 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 ZDHHC3Q9NYG2 299 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 TRPM5Q9NZQ8 1165 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 ANGPT4Q9Y264 503 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 PRR23AA6NEV1 266 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 PCP4L1A6NKN8 68 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 HRO43593 1189 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 TPPPO94811 219 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 HRGP04196 525 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 H1F0P07305 194 aaKnown RBP9.76□□□□□ -0.85
CLIP4-208ENST00000456385 ZDHHC11BP0C7U3 371 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 IL32P24001 234 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 GIPRP48546 466 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 SMSP52788 366 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 ATP12AP54707 1039 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 RPL6Q02878 288 aaKnown RBP9.76□□□□□ -0.85
CLIP4-208ENST00000456385 C2orf80Q0P641 193 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 IKZF1Q13422 519 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 RIN1Q13671 783 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 COL28A1Q2UY09 1125 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 KLHL12Q53G59 568 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 C3orf38Q5JPI3 329 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 LRRC73Q5JTD7 316 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 ARSKQ6UWY0 536 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 LSRQ86X29 649 aaPredicted RBP9.76□□□□□ -0.85
CLIP4-208ENST00000456385 ARIH2OSQ8N7S6 290 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 LMNTD1Q8N9Z9 388 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 WFDC5Q8TCV5 224 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 SLC38A5Q8WUX1 472 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 RAB8BQ92930 207 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 SCMH1Q96GD3 660 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 ARHGAP9Q9BRR9 750 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 SYT17Q9BSW7 474 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 POLDIP3Q9BY77 421 aaKnown RBP9.76□□□□□ -0.85
CLIP4-208ENST00000456385 PLA2G12AQ9BZM1 189 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 SAP130Q9H0E3 1048 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 NT5DC2Q9H857 520 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 IMP3Q9NV31 184 aaKnown RBP9.76□□□□□ -0.85
CLIP4-208ENST00000456385 CUEDC1Q9NWM3 386 aaPredicted RBP9.76□□□□□ -0.85
CLIP4-208ENST00000456385 UBQLN2Q9UHD9 624 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 CD84Q9UIB8 345 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 TRDV1A0A1B0GX56 115 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 TMEM129A0AVI4 362 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 GSAPA4D1B5 854 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 MTMR11A4FU01 709 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 TMEM202A6NGA9 273 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 TMEM88BA6NKF7 163 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 AGAP14A8MT82 685 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 H0YIV9 168 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 GABRPO00591 440 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 EEF1E1O43324 174 aaKnown RBP9.76□□□□□ -0.85
CLIP4-208ENST00000456385 COCHO43405 550 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 STC2O76061 302 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 FURINP09958 794 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 OR56A5P0C7T3 313 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 ANXA3P12429 323 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 DGKGP49619 791 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 SRP54P61011 504 aaKnown RBP9.76□□□□□ -0.85
CLIP4-208ENST00000456385 CRYZQ08257 329 aaKnown RBP9.76□□□□□ -0.85
CLIP4-208ENST00000456385 PUDPQ08623 228 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 IDNKQ5T6J7 187 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 REEP3Q6NUK4 255 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 CHMP1BQ7LBR1 199 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 ZER1Q7Z7L7 766 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 COMTD1Q86VU5 262 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 WDR48Q8TAF3 677 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 POF1BQ8WVV4 589 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 FGF11Q92914 225 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 RBPMSQ93062 196 aaKnown RBP9.76□□□□□ -0.85
CLIP4-208ENST00000456385 PPCDCQ96CD2 204 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 METTL2AQ96IZ6 378 aaKnown RBP9.76□□□□□ -0.85
CLIP4-208ENST00000456385 KLHL15Q96M94 604 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 LINC00052Q96N35 136 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 SLC7A5P2Q9GIP4 190 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 CLEC4MQ9H2X3 399 aaPredicted RBP9.76□□□□□ -0.85
CLIP4-208ENST00000456385 ERVMER34-1Q9H9K5 563 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 EMC7Q9NPA0 242 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 CTPS2Q9NRF8 586 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 MRPL39Q9NYK5 338 aaKnown RBP9.76□□□□□ -0.85
CLIP4-208ENST00000456385 RDH8Q9NYR8 311 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 CLCA2Q9UQC9 943 aa9.76□□□□□ -0.85
CLIP4-208ENST00000456385 LAMA2P24043 3122 aaKnown RBP9.76□□□□□ -0.85
CLIP4-208ENST00000456385 HELZP42694 1942 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms