RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 IGHV4-61A0A0C4DH41 118 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 ANKRD30BLA7E2S9 258 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 PDXKO00764 312 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 EPHB6O15197 1021 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 MAPK13O15264 365 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 GMFGO60234 142 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 CYTIPO60759 359 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 IGHV4-59P01825 116 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 GPIP06744 558 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 UMODP07911 640 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 HIST1H2AGP0C0S8 130 aaPredicted RBP4.38□□□□□ -1.71
CUL3-208ENST00000454323 RRASP10301 218 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 DRD5P21918 477 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 GLRA2P23416 452 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 PBLDP30039 288 aaPredicted RBP4.38□□□□□ -1.71
CUL3-208ENST00000454323 CEACAM8P31997 349 aaPredicted RBP4.38□□□□□ -1.71
CUL3-208ENST00000454323 OTX2P32243 289 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 DCTP40126 519 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 CNTN1Q12860 1018 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 RFTN1Q14699 578 aaPredicted RBP4.38□□□□□ -1.71
CUL3-208ENST00000454323 TMEM132DQ14C87 1099 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 ATAD3BQ5T9A4 648 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 CAPN13Q6MZZ7 669 aaPredicted RBP4.38□□□□□ -1.71
CUL3-208ENST00000454323 TMEM207Q6UWW9 146 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 LEKR1Q6ZMV7 388 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 FCRLAQ7L513 359 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 C16orf82Q7Z2V1 217 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 ISCA2Q86U28 154 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 NFE4Q86UQ8 179 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 VASH2Q86V25 355 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 SLC22A16Q86VW1 577 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.38□□□□□ -1.71
CUL3-208ENST00000454323 GRAMD2AQ8IUY3 354 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 CENPLQ8N0S6 344 aaPredicted RBP4.38□□□□□ -1.71
CUL3-208ENST00000454323 MARVELD2Q8N4S9 558 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 METTL27Q8N6F8 245 aaPredicted RBP4.38□□□□□ -1.71
CUL3-208ENST00000454323 COLGALT1Q8NBJ5 622 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 STKLD1Q8NE28 680 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 KBTBD8Q8NFY9 601 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 LMO3Q8TAP4 145 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 APOBEC4Q8WW27 367 aaKnown RBP4.38□□□□□ -1.71
CUL3-208ENST00000454323 HPSE2Q8WWQ2 592 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 HIST1H2ACQ93077 130 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 MCHR2Q969V1 340 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 MAGED4Q96JG8 741 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 CAPNS2Q96L46 248 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 ERGIC2Q96RQ1 377 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 NACA2Q9H009 215 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 TMEM117Q9H0C3 514 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 FAM49AQ9H0Q0 323 aaPredicted RBP4.38□□□□□ -1.71
CUL3-208ENST00000454323 GORASP2Q9H8Y8 452 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 TECRQ9NZ01 308 aaKnown RBP4.38□□□□□ -1.71
CUL3-208ENST00000454323 HACD3Q9P035 362 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 LHX3Q9UBR4 397 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 POLKQ9UBT6 870 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 MRTO4Q9UKD2 239 aaKnown RBP4.38□□□□□ -1.71
CUL3-208ENST00000454323 POMT2Q9UKY4 750 aa4.38□□□□□ -1.71
CUL3-208ENST00000454323 SLIT3O75094 1523 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 A0A087WUV0 522 aaPredicted RBP4.37□□□□□ -1.71
CUL3-208ENST00000454323 TRBV4-1A0A0J9YWV2 114 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 A0A1B0GUV1 79 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 YJEFN3A6XGL0 299 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 CCSO14618 274 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 ZNF821O75541 412 aaPredicted RBP4.37□□□□□ -1.71
CUL3-208ENST00000454323 EML2O95834 649 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 EPB41P11171 864 aaKnown RBP4.37□□□□□ -1.71
CUL3-208ENST00000454323 GP9P14770 177 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 GPX3P22352 226 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 GLRA1P23415 457 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 CTNNA2P26232 953 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 METAP1P53582 386 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 LIMK2P53671 638 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 DVL1P1P54792 670 aaPredicted RBP4.37□□□□□ -1.71
CUL3-208ENST00000454323 DCDC1P59894 354 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 ERVFC1-1P60608 527 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 DRP2Q13474 957 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 ANKRD55Q3KP44 614 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 FGD3Q5JSP0 725 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 LIPKQ5VXJ0 399 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 NCR3LG1Q68D85 454 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 SPSB3Q6PJ21 355 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 RFPL4BQ6ZWI9 263 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 C17orf64Q86WR6 236 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 NAGSQ8N159 534 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 SPEM1Q8N4L4 309 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 CCDC185Q8N715 623 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 ADAD2Q8NCV1 583 aaKnown RBP4.37□□□□□ -1.71
CUL3-208ENST00000454323 FCAMRQ8WWV6 532 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 SMPDL3AQ92484 453 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 CASP10Q92851 521 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 ZSCAN5AQ9BUG6 496 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 COG4Q9H9E3 785 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 UPF2Q9HAU5 1272 aaKnown RBP4.37□□□□□ -1.71
CUL3-208ENST00000454323 FARSBQ9NSD9 589 aaKnown RBP4.37□□□□□ -1.71
CUL3-208ENST00000454323 INTS9Q9NV88 658 aaKnown RBP4.37□□□□□ -1.71
CUL3-208ENST00000454323 COX16Q9P0S2 106 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 CHRNA9Q9UGM1 479 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 SNX6Q9UNH7 406 aa4.37□□□□□ -1.71
CUL3-208ENST00000454323 DIMT1Q9UNQ2 313 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms